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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0360600 |
| Transcript ID | LotjaGi3g1v0360600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.2 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151SGP6|A0A151SGP6_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi3g1v0360600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:74330826..74336690) extracted from Lotus japonicus Gifu genome v1.2.
ATGACACTGCTTCTAGGTCCTCCAAGTTCTGGAAAGACCACACTCCTTCTGGCATTGTCAGGAAAGCTTGATCCAAGTCT AAAGGTGGAAAACAATTTTCCTTAATTTTACTAGTTTTGATTGTTTTCATTCATTCTCAATGATAAAAGTTGCGTTTCTC ATCTAATATGAATGCCATTGTGTCCTCCAGGTGTCTGGAAGAGTGACTTATAATGGGCATGAAATGAATGAGTTTGTACC TCAGAGAACAGCTGCCTATATCAGCCAGCATGATGTTCACATTGGAGAAATGACTGTGAGGGAAACCTTGTCTTTCTCAG CAAGGTGCCAAGGGGTTGGATCACGTTATGGTTAGCCACTTTTAACACTAACGCCTTGCCTTTTTCTTTTTCTCTGCAAT CATACTATTGTTTCTATATCTAATTTGGGTCAACATGACTTGCATGACCAAATTTTTATCTTTTGTGATGCACAGATTTG TTAACTGAGTTGTCTAGGAGAGAAAAAGAAGCAAACATTAAACCAGACCCGGATATAGATGTCTACATGAAGGTGAGAAA GAAGCTATTTTTAATCATTATTGTACTATAAAAAATGTTACTTCGGAAGCAATAAATGTAATATCTCTGCATTTGATTTG CTTATGATATACCAGGCAGCTGCAACTGGAGGCCAGGAGGCAAGTCTGCTTGTAGATTATGTTTTGAAGGTAATCCTAGA ATTAGGTTCTTTCGGACTTTAAACTAAATTTTCTTAACATAATCAACGAAGGGAAGCCACAATGTATTTATTGTAAAATT TTGCAGATATTGGGGTTGGATATATGTGCTGATACTATGGTGGGGGATGGAATGCTGCGTGGTATTTCTGGAGGACAAAA GAAGAGGGTTACCACAGGGGAAATGCTTGTTGGAGCAGCAAAAGCTCTATTCATGGATGAAATATCCACTGGATTGGACA GTTCCACAACTTTTCAAATTGTGAACTCTGTCAGACAATATGTTCACATTCTCAAGGGAACTGCAGTTATCTCTCTGCTC CAGCCAGCACCGGAGACTTATGAACTTTTTGATGATATCATTCTTATCTCTGATGGTGAAATTGTTTACCAAGGACCTCG TGAATACGTTCTTCAATTTTTTGAATATATGGGTTTTAAATGTCCTGAGAGGAAAGGTGTTGCTGACTTCCTTCAAGAAG TAAGTCAAAGTTTATCTTTATATCTATCATTTGAAATTTTTGATGAAACCATGTACATATAATATCTCTGCGTGCAGGTA ACTTCAAAAAAGGATCAAGAGCAGTATTGGATGCGCCGACATGAACCATATAGGTTTGTAACTGTTACTCAATTTGCAGA GGCATTTCAGTCATTCCATGTTGGGAGGAGAATCGGAGAAGAGCTTGCAATCCCATTTGACAAGTCTAAGAATCACCCAG CTGCATTAACCACAGAAAAATATGGTGTTAACAAGAAGGAGCTGTTTAAGGCTAACTTCTCAAGAGAGTGCTTGCTTATG AAAAGGAATTCTTTCATATACATTTTCAAGATATGCCAAGTAGGTTCTAGCTTCCTTATATAAATAAATGCTTTACATAT TTATAGTCGTTTGATAATATAGTTGATTTTCTAATTATTTCTCAAAATGGTTGCAACTTTTGATTTTTCCACCTTTGCTG TTTAGCTTACAATCATGGCAATAATTACCATGACACTCTTCCTAAGAACTGAAATGCATCGGGATTCCTTGAATGATGGA GGTGTTTATTCTGGTGCACTATTTTTCGCCATAGTAACGATTATGTTCAATGGACTGGCTGAGATTTCAATGACTATTGT AAAGTTGCCTACTTTCTACAAGCAAAGAGACCACCTATTTTATCCTTCATGGGCATATGCCATTGCCTCATGGATCCTCA GGACCCCTATGACATTTGTGGAAGTTGGTGCTTGGGTTTTTCTCACCTACTATGTAATTGGATTTGACCCAAATTTTGGG AGGTATAGAAGAAGCTTCCTTTATCTGTTTGCATCAATATGCTTGATTTCTTGTATTTGAATGTAGTGTTGCACTGTTAC TTATGATGTAAAGTATATATGGTCCTTCATGCAGATTGTTAAAGCAGTACCTTCTGCTATTATTGGTAAATCAAATGGCT TCTGGATTGTTTCGAGCAATTGCAGCACTTAGTAGAAACCTGATTGTGGCCAACACATTTGGTTCCATTGCACTTCTCAC ACTTTTTACGTTGGGTGGCTTCATTTTGTCCAGAAGTGAGTTCAGTTAATAAACATAACGAAGTTGTTGCTTTTATCACA TAATGGAAATTGATATGTTTTCCTTTCATTGGCAATGGAACAGAGAATATCAAGGACTGGTGGATTTGGGGTTACTGGAT TTCACCTTTAATGTACGGGCAAAATGCTATAATGGTGAATGAGTTCCTTGGAAATAGTTGGAACCAGGTAATTTTCTAAA CTTTCAACTTTAGTAATAATTTCATTTCATTTCAGAAATGTGCTGGCCTAATTAATTTTCTGTTCAATTACAGCTTACTG GAAATTCAAATAAGACAATAGGAATTCAAGTTTTGGAGTCACGCGGGTTCTCCACACATGCATATTGGTATTGGATTGGG ATTGGCGCGATGATTGGATTTACCTTCCTTTTCAACATTATATACACTCTAGCTCTTACTTACCTCAATCGTGAGTAATT TCACATTTGGCTACTTATGGTTCTTCAAGTGATGTAAAACATTATTACTTTCTTAATTTATCTCAAATTATTTATCCTAT CAGAATATCAAGGTAGTATTCACAATAGTTCAACCACGCTCTCTTTAACACTTTTAATTAGGATATTTCAGTTAAAACAA ATTATTTTGTTATAGCAGTTAGTACCATGTACCTAAAATTATATATAATATGAGATGGATTAACAAACAAACATGTTTTT ATTCAGCATTTGAGAAGCCACAAGCAATAATATCTGAAGAATCAGAAGGCAATGAGCTAAATGGCAGAGTTCTAGAAGTT GAATTACCACGCTTTGGTAATCTATCTTGTTTATATCTCCCAAGAAAACTCAAAACTCAACGCATGCATACTATTTTCGA GTGTGAGCCAAATGGTTAATGATTCAGAATATGCACTGAGATACTGAACAATTTTCTACTATCATGCAGAAACTTTTGGA AGAGCTAATGCTGTGGAGGGTTCGAGCCACAGGAGGAAAAGAGGAATGGTTCTTCCTTTTGAACCATATTGTATCACATT TGATGAAATCGTGTACTCTGTTGACATGCCAAAAGTAAGTCATTTTCAAAGTTATAATTAATATTTGATTTTCTAGAAAC TTTGTTTTTAGTTTAAACACCAATTCTTGGTATTTCAAATGTAGGAAATGAAGGATCAAGGTGTAATGGATAATAGGTTA GTGCTTTTGAAGGGAGTTAGTGGTTCATTCAGGCCTGGTGTTCTCACAGCCTTGATGGGTGTAAGTGGAGCTGGTAAAAC TACCTTGATGGATGTTCTAGCTGGTAGGAAAACCGGTGGATATATTGATGGGACCATAAAAGTTTCAGGCTACACTAAAA AGCAAGAAACATTTGCTCGGATCTCTGGCTATTGTGAACAGAATGATATCCACTCTCCTCACGTTACTGTCAAAGAGTCC TTGCTCTACTCAGCATGGCTTCGTTTACCGGCAGAGGTTGATTCAGATACTAGAAAGGTTTGTGCTTACAGCTCTAGACG CCTCATGATTTTTGAATGTTGCATAATTTGTAAGGCCAAAGCAGTTTACAATGCTTGAGCTGTTTCTTAGGCTGATTGCT CATACTTTTGGATCTGATATTCAATTGTAGATGTTCATCGAGGAAGTCATGGAACTAGTGGAGCTGAACTCACTCAGGAA CTCACTTGTTGGTTTGCCCGGTGTGAATGGTCTCTCAACTGAACAGCGCAAGAGACTAACTATTGCAGTTGAATTAGTGG CGAATCCGTCCATAATTTTCATGGATGAGCCTACATCTGGGTTAGATGCTAGAGCTGCTGCTATTGTTATGAGAACTGTG AGGAACACTGTTGACACTGGAAGAACAGTTGTTTGCACTATCCATCAACCAAGTATTGACATATTTGAAGCTTTTGATGA GGTAAGAGATGCTATGATAAAATGAAGATGTCTTTTATCGTTTTTCCTCTACTGGACTTGAATCTGATAAATACTGCATA TGATTGTAGTTATTCCTAATGAAGCGTGGAGGACAAGAAATATATGTTGGGCCATTGGGTCGTCATTCTAGTCACTTGAT CAAGTATTTTGAGGTTCGATGCAACTTAAATTTAATATTATTTATAGAGAATACGATAACCATTATACTTTTGGGTAAGT TATTTTCGAATGTTTTCAATTGTCCAGAGTATTGAAGGGGTTAGTAAAATCAAAGATGGCTATAATCCAGCAACTTGGAT GTTGGAAGTTACAGCTTCAGCACAAGAACTTACTTTAGGTGTTGATTTTCATGAGATATACAAAAGTTCTGAGTTGTATA GGTGAGCTAATTTGTTTGGATATGGGTTTATTATCTATGGTAGCTATGATCATTTTCGAGAAAAGGCTTATGTTATAAAC TATTCTTCAGGAGAAACAAGCAACTTATAGCAGAACTGGGCAAACCTGCTCCTGGTTCAAAGGATCTTCATTTCCCCACA CAATTCTCACAGTCATTTTGGGTCCAATGCTTGGCTTGCTTATGGAAACAGCATTGGTCATACTGGCGTAATCCACCATA CACCGCTGTGAGGTTTTTCTTCACTACTTTCATAGCCTTGATGTTTGGAACAATATTCTGGGACCTCGGAGGCAAATAGT AAGTCTAAATTCATATTTTAGAAAGGGAAACAAATTACATTGAGTCAATTATGTCTTTGTAGTTAATCTTTTATTCCTTT TGTGGCTTCCAGCTCAAGCAGACAGGACTTGTATAATGCCATTGGCTCGATGTATACTGCTATTCTCTTCATTGGGATCC AAAATTCCGCCTCAGTACAACCAGTGGTGGCCGTTGAAAGAACTGTCTTTTATAGAGAAAGAGTTGCCGGAATGTACTCT GCCTTACCTTATGCCATTGCACAGGTAATAAAAATAAAATCACCTTTTCACAAACCAAAAGTGTTTGTATTATGGTTTGC ATTATTCCCATGTTAACATAACTCAATCTTCTTTGTCACAGGTTGTAATAGAGTTACCATATGTTTTTGCCCAAGCTGCA TCATATGGTGTCATAGTTTATGCCATGATTGGATTTGAGTGGACAGTAGAGAAATTCTTCTGGTACATGTTTTTCATGTA CTCCACATTGTGCTACTTCACTTTCTACGGCATGATGGCGGTAGCAATTACGCCAAATCACCATGTTGCTTCAATTATGG CTGCTGCATTTTATGCGATTTGGAACCTATTTTCAGGATTTATCGTCCCACGACCTGTAAGTATTGCCAACCTTAAAATG CATTGAAGAATACATTTGAATGGATTCTCAGGAAGTATATGGTTACTGAACTTGTTTTCCATTTTCGTTTCATTTTGATT ACAGAGAATTCCTGTTTGGTGGAGATGGTACTACTGGGCATGTCCTGTGGCCTGGACCATATATGGGTTGGTTGCATCGC AGTTTGGTAATATAACGCATATAATGGAATCAGAAAATGTGTCAGTTCAAGATTTTATAAGAAGTTATTTTGGTATCAGA CATGACTTCGTAGGAGTTTGCGCAGTTGTGGTTTCTGGAATTGCTCTACTCTTTGCTTTTATTTTTGCCATCTCAATTAA GCTCTTCAACTTCCAACAGCGATAG
CDS sequence (LotjaGi3g1v0360600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACTGCTTCTAGGTCCTCCAAGTTCTGGAAAGACCACACTCCTTCTGGCATTGTCAGGAAAGCTTGATCCAAGTCT AAAGGTGTCTGGAAGAGTGACTTATAATGGGCATGAAATGAATGAGTTTGTACCTCAGAGAACAGCTGCCTATATCAGCC AGCATGATGTTCACATTGGAGAAATGACTGTGAGGGAAACCTTGTCTTTCTCAGCAAGGTGCCAAGGGGTTGGATCACGT TATGATTTGTTAACTGAGTTGTCTAGGAGAGAAAAAGAAGCAAACATTAAACCAGACCCGGATATAGATGTCTACATGAA GGCAGCTGCAACTGGAGGCCAGGAGGCAAGTCTGCTTGTAGATTATGTTTTGAAGATATTGGGGTTGGATATATGTGCTG ATACTATGGTGGGGGATGGAATGCTGCGTGGTATTTCTGGAGGACAAAAGAAGAGGGTTACCACAGGGGAAATGCTTGTT GGAGCAGCAAAAGCTCTATTCATGGATGAAATATCCACTGGATTGGACAGTTCCACAACTTTTCAAATTGTGAACTCTGT CAGACAATATGTTCACATTCTCAAGGGAACTGCAGTTATCTCTCTGCTCCAGCCAGCACCGGAGACTTATGAACTTTTTG ATGATATCATTCTTATCTCTGATGGTGAAATTGTTTACCAAGGACCTCGTGAATACGTTCTTCAATTTTTTGAATATATG GGTTTTAAATGTCCTGAGAGGAAAGGTGTTGCTGACTTCCTTCAAGAAGTAACTTCAAAAAAGGATCAAGAGCAGTATTG GATGCGCCGACATGAACCATATAGGTTTGTAACTGTTACTCAATTTGCAGAGGCATTTCAGTCATTCCATGTTGGGAGGA GAATCGGAGAAGAGCTTGCAATCCCATTTGACAAGTCTAAGAATCACCCAGCTGCATTAACCACAGAAAAATATGGTGTT AACAAGAAGGAGCTGTTTAAGGCTAACTTCTCAAGAGAGTGCTTGCTTATGAAAAGGAATTCTTTCATATACATTTTCAA GATATGCCAACTTACAATCATGGCAATAATTACCATGACACTCTTCCTAAGAACTGAAATGCATCGGGATTCCTTGAATG ATGGAGGTGTTTATTCTGGTGCACTATTTTTCGCCATAGTAACGATTATGTTCAATGGACTGGCTGAGATTTCAATGACT ATTGTAAAGTTGCCTACTTTCTACAAGCAAAGAGACCACCTATTTTATCCTTCATGGGCATATGCCATTGCCTCATGGAT CCTCAGGACCCCTATGACATTTGTGGAAGTTGGTGCTTGGGTTTTTCTCACCTACTATGTAATTGGATTTGACCCAAATT TTGGGAGATTGTTAAAGCAGTACCTTCTGCTATTATTGGTAAATCAAATGGCTTCTGGATTGTTTCGAGCAATTGCAGCA CTTAGTAGAAACCTGATTGTGGCCAACACATTTGGTTCCATTGCACTTCTCACACTTTTTACGTTGGGTGGCTTCATTTT GTCCAGAAAGAATATCAAGGACTGGTGGATTTGGGGTTACTGGATTTCACCTTTAATGTACGGGCAAAATGCTATAATGG TGAATGAGTTCCTTGGAAATAGTTGGAACCAGCTTACTGGAAATTCAAATAAGACAATAGGAATTCAAGTTTTGGAGTCA CGCGGGTTCTCCACACATGCATATTGGTATTGGATTGGGATTGGCGCGATGATTGGATTTACCTTCCTTTTCAACATTAT ATACACTCTAGCTCTTACTTACCTCAATCCATTTGAGAAGCCACAAGCAATAATATCTGAAGAATCAGAAGGCAATGAGC TAAATGGCAGAGTTCTAGAAAAACTTTTGGAAGAGCTAATGCTGTGGAGGGTTCGAGCCACAGGAGGAAAAGAGGAATGG TTCTTCCTTTTGAACCATATTGTATCACATTTGATGAAATCGTGTACTCTGTTGACATGCCAAAAGAAATGA
Protein sequence (LotjaGi3g1v0360600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLLLGPPSSGKTTLLLALSGKLDPSLKVSGRVTYNGHEMNEFVPQRTAAYISQHDVHIGEMTVRETLSFSARCQGVGSR YDLLTELSRREKEANIKPDPDIDVYMKAAATGGQEASLLVDYVLKILGLDICADTMVGDGMLRGISGGQKKRVTTGEMLV GAAKALFMDEISTGLDSSTTFQIVNSVRQYVHILKGTAVISLLQPAPETYELFDDIILISDGEIVYQGPREYVLQFFEYM GFKCPERKGVADFLQEVTSKKDQEQYWMRRHEPYRFVTVTQFAEAFQSFHVGRRIGEELAIPFDKSKNHPAALTTEKYGV NKKELFKANFSRECLLMKRNSFIYIFKICQLTIMAIITMTLFLRTEMHRDSLNDGGVYSGALFFAIVTIMFNGLAEISMT IVKLPTFYKQRDHLFYPSWAYAIASWILRTPMTFVEVGAWVFLTYYVIGFDPNFGRLLKQYLLLLLVNQMASGLFRAIAA LSRNLIVANTFGSIALLTLFTLGGFILSRKNIKDWWIWGYWISPLMYGQNAIMVNEFLGNSWNQLTGNSNKTIGIQVLES RGFSTHAYWYWIGIGAMIGFTFLFNIIYTLALTYLNPFEKPQAIISEESEGNELNGRVLEKLLEELMLWRVRATGGKEEW FFLLNHIVSHLMKSCTLLTCQKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 287 | 287 | 1.1E-41 | – | |
| ProSiteProfiles | 1 | 246 | 246 | 9.251 | ||
| SMART | 1 | 223 | 223 | 0.0098 | ||
| Phobius | 1 | 341 | 341 | - | – | |
| Pfam | 2 | 171 | 170 | 1.6E-13 | ||
| SUPERFAMILY | 2 | 246 | 245 | 2.43E-29 | ||
| PANTHER | 18 | 614 | 597 | 1.2E-300 | – | |
| PANTHER | 18 | 614 | 597 | 1.2E-300 | – | |
| Pfam | 325 | 537 | 213 | 3.0E-45 | ||
| TMHMM | 341 | 363 | 23 | - | – | |
| Phobius | 342 | 363 | 22 | - | – | |
| Phobius | 364 | 374 | 11 | - | – | |
| Phobius | 375 | 399 | 25 | - | – | |
| TMHMM | 375 | 397 | 23 | - | – | |
| Phobius | 400 | 418 | 19 | - | – | |
| Phobius | 419 | 448 | 30 | - | – | |
| TMHMM | 426 | 448 | 23 | - | – | |
| Phobius | 449 | 459 | 11 | - | – | |
| Phobius | 460 | 479 | 20 | - | – | |
| TMHMM | 461 | 480 | 20 | - | – | |
| Phobius | 480 | 484 | 5 | - | – | |
| Phobius | 485 | 508 | 24 | - | – | |
| TMHMM | 485 | 507 | 23 | - | – | |
| Phobius | 509 | 514 | 6 | - | – | |
| Phobius | 515 | 534 | 20 | - | – | |
| Phobius | 535 | 567 | 33 | - | – | |
| Pfam | 542 | 605 | 64 | 4.8E-30 | ||
| Phobius | 568 | 595 | 28 | - | – | |
| TMHMM | 568 | 590 | 23 | - | – | |
| Phobius | 596 | 663 | 68 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi3g1v0360600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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