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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0395300 |
| Transcript ID | LotjaGi3g1v0395300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin, putative; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0S3SYT0|A0A0S3SYT0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79523901..79531554) extracted from Lotus japonicus Gifu genome v1.2.
TTTTGGCCATCTTCATTGAAAAAAAACCCCTTATATATAGCCCTAATTTTCCCTGCAATTAGCGCGTAAATTCTCCATAT CAATTTGGTTGTTACAAGCTCAACAGAATCAAGGGGCAATATCGTCAATAGAAACATAACGGAATGAAATTTTCAAACGC ACATTTCGAAAGTTTGTTACTCAACTGCTTCTTCTTCTTCGTCGATTCTCTCTCGCTCTCTGAGTTGTGGTGGTGGTGGC AATGGAGAATCTGATACAATTGGTGAACAAAATCCAAAGAGCATGCACCGCGCTCGGCGATCACGGCGAGGAGAGTGCCT TGCCCACTCTCTGGGATGCCCTTCCCTCCATCGCCGTCGTCGGAGGACAGGTCCGTCCAATCGATTCCCTTTTACCATCT CATTTATCATCATTATCATTGTTAATTACAACTAATCAATGCAGTTAAACCTGATTTTTGTTTAATTTTTCCATTTCTCG TAAATTTGGAGTTCGTTGATTTAGATTTGTGCGTTACTTTTGATTTTCCAGAGTTCAGGGAAATCTTCAGTGTTGGAGAG CATTGTTGGGAAGGATTTTTTGCCTCGTGGATCTGGAATTGTTACGCGGAGGCCTCTTGTTTTGCAGCTTCATAAGATTG ATGATTCCAGAGAGTATGCTGAATTCATGCACCTTCCAAGGAAGAGATTTACTGATTTTGGTATTCTCCTAAACCTACAT TCAGTACTGCTATTCACTTTTCACACCCTTATGGTTGTTTTACTTGCATTTAATTATTGATTACACTAAGCATCAGTGCG GTAGACTGGTAGCAACTAGCACTAGCAAGTACATTTAGTATCTCTTTGCTGGAGTTTTCCCCTAATAAATGTTAAAGTGT TCTATGTTGTCAATCCTAAATCTCAGCGCGTAGTGGCCGGGAAAATGAATTTGTCTATATTTTGTATAATTAATCCCATC TATATATATATATGAAGAAAGGAAGGATCCCAACAAAGAATCGATCTTTCTTTTAGTTGTTGAATCTCTCTTTGATTGAT CAATGTGTCATATTTCGAATCCTCATTCCTAATGGAATCGAAATGCTAAATCAATAATAAATTGTACTTGAAATTCATAA CATATTCATACTTTCATAGCAGTAAACTAGGAATATAAGTCATACTTCTTGAGAGAGCAAGGGCGAAGGGCGAAGAGAGC AGGGGAAGTGAGAAGGGAAATGGGATGGGATGGGACTACAGGATCCCACAGGTGCTTGCCCAGATTGACAACATAGGAAG TGTTACCTAGTTTTTTTAAGGATTTTAATTTATATGCAGTGACTGTGTAGTAAAGAGTTTTAGACATACATTCAATCAAA TCTCTCCATTTTTCATTTTAAATATTTTAAAATTCAAATTTAATTATGACATGGCAAATTGATGAATTCTAATTGAATGA CTGGGTAAGTCTTTGTCAGTCCATGGTAACTAAACTCGTTTTTATAAAAGAAATTAAAATATTGATGATGTGGTTTCACT GGTAGTTACTAGTTTTGCTTGTTATGTAGCTGCTGTAAGACAAGAGATAGCTGATGAGACTGATAGAGAAACAGGTCGCT CCAAGGGTATTTCATCAGTTCCCATCCATCTCAGTATCTACTCTCCTAATGGTGAGATATATATAAATATAGCAATCTAA TTTTATCTTATTGGTAATTAAAATTGTGAGACTAGGAACTTAAAACATGCATAATTTGATTTTGTTTTTTAAGTTTGAAT ATATCAGTTGATTATATGTTACTATAACAATCATATTGACTATTGCTGGAACAGTTTTACCAATCACCACTTGCTTGCAA AATACATAGTATTACAATGACAATTATGTTCTACTCTAGCACATCAATGACATCATGAATGCCCATCAGTCTAATCTTTG TTCTTTTTTGGTCCAAAGTATTGAACACTTTGGTTTTTAAATATTAATGAGTCCTAGTACCAATTTTTTTAAACTAGTAT CGAACAACAAGTATTATCTTATAACTGCACCATCTACATGAGTTATTTTTTAAAAAGGCTCTAATCTAAGTATAACTTAT TTGTGCTTGTTACTTTTTAAATTGAATGTTCTTGTTTAAGTATCCATTTCATCCATTGAATTTGTTGACTTGGCAGTTGT CAATCTGACACTGGTTGATCTTCCGGGACTTACAAAAGTTGCTGTTGGTGAGGTTTTATTCTAAGATTGGCTTTTTGCTC AGTTAAGTTAAATTTACAAGCACTATTGCATATAGCTATGGAAATTTATGGTATAATGTTGTCTGTTATTGCAGAGGGTC AACCAGATAGCATTGTGCAAGACATTGAAAATATGGTTCGGGCCTTTATCGAAAAGGTGATTATTCTTATATACAATGAA ATAATCAAGAAAGATGGTGATGCATATGGGAACATTTATTTGTTGTGAGGTGATGAAAATTTAATGAAATGCTTAATGCT TAATGCATATGCTTAATGATTGCCCTGATGATATCCCTCTCTTTCAAATTGCCAATGAGATCAAGGCGCGAAAAGCTTCT CTGCGCCGTTGAGGGTGAGATTTGGGGTGGTGGCGAGTTATGGGCTGTATAGGTTTTTTCCTAGTCCTTTGAGAGTTTTT TGGGTATTGCAAACGACTTTTGGTTTTTGTAGTTGTTGCAATTGCGGCTTCTAGTTTTTGAGGCTATTGTTCTTATTTGC CGCTGTTTTGGGTTGGTTTTTTTTTGTTCTTTTTGGTGGGCAGCCTTGGTCGTGTGGGTTTTTGATACCGTGTTGAGGTT GTTTTGGTGTATATCTTATCAGTTTCCTCATTATTATTATATATATTTTCTCCTTTTGAAAAAAAAAAAAAGTTCAATTG AATAATGCTCAGGAGACTTAATATTCAATTTTAGACATTCATCCTGAATCCTGATCCAGTTACACTAATAATGTAATGCC TTGCTCTCACTCTAATAATAGTTATACCTTTTTTTTATCTTTGTTCGAGAATCCCCATGGACGTAATTATGAGTCAACTC TCAGTTTAAGGCCCGTGATAATGTAAAACCTTTCCTATTGTAGTGACAAATTTGAACTTCTAACATTGCAATTATATAAA GTTCATCTGGAGTCGCAGTTCACTCCTATTGTGACTTACGAAGGTTGACTTCTAATGATAGTTAAATGTTTTACTATTAC TGCCATCACTATCGCTAATCTAATAATAGCCAATTGTTTTGCATTATTTATTTTGCAGCCGAATTGCATCATTTTGGCAA TATCTCCTGCTAATCAAGACCTTGCTACTTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCCAAAGGTAAGATGGTG AACATGATTTTTTCTTAAAAAGTACTGGCAAGAGGAAATAGTGTCATTTGAAGTTAGATGTATTAAGTAATATCATAATT AGCTAAAGCTGAAACAATAGATGTTAAAAATGAAAAACATAGAAGGGTTCATAACATCGTTTGCAAAGCAATTTAAGTTG TATAGATTGATTATTGTATATTGTATTAGGCTTCTTATACCAATAAATTATCATATTTGTATTGAATATCAAATACAATT TTCTTTATATTATCATATTTGTAGTGAATATCAAATACAATTTTCTTTATATATAATTGTTGGTGTTGGAATAGGTAAAT TTTAGTTGATTTAATACCGAAATGTTTCACTGAGATTCTATGCAGTTATTGTCAAAAGAGAAATACTATTAACACACTGT CTACGCATTCTTTGTCATAGAGTGAAATCATGTAGGTTCCATCAAATAACGAGAGGTTCCCAGCCTCCCACCAAATATGG GATGGAAATCACATGAGTTTCATCTAATAAGAATGTGTTGATCCACCAGATTATTAAATGTATTGAATTGATTTTCTGAG GGAGGAAGTAAATTGTATTGGGCTAGTTCACATCTTTAGAGAAAAAGTATTGTTGCGGACTACCTTGCAAAGAAGGCATG TAATAGAGAAAAGGAAATATGGACACTGTTAGATAGGCACTAAGAGTGGTGCCTCTTGTAAAGCTTTCTTCTGCAAGTTC TTGCTGATATATTTATGAATGAATGTTTCAGTGCTTCAAAAAAAAAAGTGTTGATATGAGTATAGTAGAGACAGTGTATA TTATTGACTATATACAGTGATTTGTATAGATACAATGCAAAAGAGAAAAAGGAAAGTATCGCCCTGATTTTGGAGATATA TTCCTAATATCCTAAGATAACAAATCTTCCTAAAATACGAATATAAACAATTATCTGTCAAATAAATTAGCAACTTAATC AACTCAAATATTCACACAATCTGGACTACTATGTGGCTGAAAATCACTTGTTTATAAAATTATTTTAATTTTTAGGGGAA AGGACATTTGGAGTTTTGACAAAGATTGATCTTATGGACAAAGGTACTGATGCAGTTGAAGTAAGCATTCTCTTCCTCCT TTAAATTCAGAAATGGTAGGCTACCGTGCAATGTTTGCCTCAGGCAAAACTCTTTCCTATTTGGTGTCCTTTGACCATGC TTTTGGCATCAAAAGAGTTATTTTTGTACTTTCAGGAATTTAGTATAAAATATAAACTCAGATTACAATATAGAAGTAGG AGTGCAATTATGGTAAACAAATTTCATATAGTTGTCATTTGATGATTAAAACGCATGGTAAACAATTTGGAGTTTTGACA CTTGGGGATATCTACTCACTGAAATGGAGGACCAGGATAATATATCTCGAACTTATTTAGTGACCTTGTTATGGTTTGGC TTATATTTTGCCTTTACATGTCTCAACAGTTGTTTGAAACTTTAGAATAACACAGACAATCCTTTTCTCGGAGTTAAGAT TTCCCTATTTGGTTTATTTTCTTTCGTTTATAAGCTTAAATTTCTGGAACTGAACTTTTCAAGTTCATGGAGTGGCTTCC TCTTATGTTTCCTCCCTCCTATTCCTTTTTTCAGATCCTTGAAGGTAGATCATATAAGTTAAATTACCCTTGGATTGGTG TTGTTAATCGCTCCCAAGCTGACATCAACAAAAGTGTTGATATGATTGCGGCTCGACGTAGAGAGAATGAGTATTTTGCA AACACCCCAGAATATAGACATCTTGCTAGCAGGATGGGCTCTGTGCATCTAGGAAAGGTGATGTCTAAGGTATGTGAAAT CTTCTATTGACACATTCATTCGGGATGTACATGTTACTTTTTTGCAAAATTGGTCAATTCATTATGGTCCTTTTTTATGT CTTGTTTTCAGCATTTAGAAACTGTTATCAAGTCTCGGATCCCAGGGCTTCAATCACTCATTAACAAGACTATTATTGAG TTGGAGACAGAATTGACCCGTATTGGGAAACCTATTGCCGCTGATACTGGAGTAAACCACCTCCTCCGATCTCTCCCCCT TTCTCCCATTTGCTTTTACAAATGCATGAATTATTGATGTTCTTTCTCCATTTATAGGGGAAGTTGTACATGGTAATGGA AATCTGTCGAACTTTTGATCAGATATTTAAAGATCATCTTGATGGCATGTATGTTCCTCTTTCCCCTTTTGATGAATTAA CACGTCATTTTTCATATCAAAAAGATCCGATTTGACCTTGGAAATGATTGAATTTCTACAGACGATCTGGTGGTGAGAAA ATTTACCAAGTATTTGATAATCAATTTCCAGCAGCTCTAAAAAGGCTGCAGTTTGACAAGCATCTATCAATGGACACTGT ACGCAAACTAATAACTGAAGCAGATGGGTATCAACCTCATCTCATTGCTCCTGAGCAAGGATATCGCCGACTTATTGAAT CTTGCATAGTATCAATGAGAGGCCCTGCTGAAGCAGCAGTTGATGCTGTATGTATTTTACTAAAATATAAATAAATACTT TGCTATGAGTTACAACTTGTAACATGTTCGTTTAAGAAATTACTTGTGCTAAAATTGTAGCTGACTTCTTCCTCTATTTT TTTGACCTGATTAACTGAAAAATCATATTGACTCTGGCACTATTTAGGCTTAAGAAACATTCGCAAATCTTTACTTGTCA AAGTTGACATCATTTAAGGCAAAAGGTTGAAGTCAATCATTGAGGTGAAATTATTTTCTAATGTTGTGTTATTCATTAAA CTCCTTACTTTTATAATGTTTCAGGTTCATGGAATTCTGAAGGATATGATTCACAAGTCTATGAGTGAGACAATGGCAAG TAGCAAATTGCTTATTTTATGTTAAGTCTATATAGTTCTCTACATGTCTAAGTCTGGAGATAATTTGTATAACTTTAGCT GAATATTCAACTTGGTATATATTTTTTCCAGTGCCTTAATAATTTCAGTTTTATGTTTGATTGTAGGAATTAAAGCAGTA CCCTACCTTGAAAGTCGAGCTCGGAAGTGCAGCTGTTGATTCACTGGAAAGGATGAGAGAAGAAAGTAAGAAAGCAACTC TGCAATTAGTAGACATGGAATGTGGTTATTTGACAGTTGAATTCTTTCGCAAACTTCCTCAAGACGCAGAGAAGGGCGGA AATCCAACCCACTCACTTTTTGACAGATATAATGATGCTTATCTTCGTCGAATTGGTAAGAAACTAAAATTTAAAATAAA TATTTTATGCCTATGCTCCTAATAATTGAAATAATAAAGGACTTTGAGTCCATTAGCTACATATTAGAACATATGATATT GAAATTAGAGCTATTGTTTTTCACCCTTTACTGAGATTATTCCTTGTATACAACAGCTACCACTGTCTTGTCATATGTGA ACATGGTATGTGGGAGTCTAAGGCATACCATTCCCAAGTCTGTAGTTTATTGTCAAGTGCGGGAAGCAAAGCGCAGTTTA CTGGATCATTTCTTCACAGAGTTGGGGAAAAAAGAGGTGAGCTTTGTTATTTTCCTTGAAGAATATAGGCATGTCTGGTG AGAATAGGGTGAGCTTAATTTTGCATGATCTACAAATTGTTTTGCAGGGTAAACAACTAGCTGCATTGCTGAATGAGGAT CCAGCAATCATGCAGCAAAGGACCTCACTTTCTAAGAGGTTAGAGCTGTATAGAAGTGCCCAATCAGAAATTGAGGCTGT TGCATGGGACAAGTAAAAAAGGTGCTTAGCTAGTTCTTAGAATTTGAATTTTGTTTTTACAGGAGCCATTTTTTATTCTT GATATCTGATTCTTTATTCATTGTGGCAGAATATTGTAGTTATATTTTTTCTGGCACGGGTCAGTGAAGTTATTTTCACC GAATAAGGCTATGCTCCTACGTTTGTTTTTTTTCTTCTGGTGTAATTCATTTTCGTATTCACTTATTTACTACATTGTTA AAATCTGTGCTCATTCTTTTTGTGGAAGGAAGAAAATGGATGATAATAGTTAAGAGTTGGATGAACTAAAGTGATGAACA AACTCTGCTTTTTGTGGAGCTCTTATGAATAAATTAACTATATAGTGATAATTCTGAGTTAACTTCTACTGAGGTAGACA CATATTCAACAACAAAAATTGTAGTTGTTGGATTCGGTTATTTCTACCAACTATTCAGCAAAAATTAGCAGTGTATAAAT TCTGCTAGTCTTAATATTGGGAACAAATTTATTGTTGGGTTGTATAGTAATGAC
CDS sequence (LotjaGi3g1v0395300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATCTGATACAATTGGTGAACAAAATCCAAAGAGCATGCACCGCGCTCGGCGATCACGGCGAGGAGAGTGCCTT GCCCACTCTCTGGGATGCCCTTCCCTCCATCGCCGTCGTCGGAGGACAGAGTTCAGGGAAATCTTCAGTGTTGGAGAGCA TTGTTGGGAAGGATTTTTTGCCTCGTGGATCTGGAATTGTTACGCGGAGGCCTCTTGTTTTGCAGCTTCATAAGATTGAT GATTCCAGAGAGTATGCTGAATTCATGCACCTTCCAAGGAAGAGATTTACTGATTTTGCTGCTGTAAGACAAGAGATAGC TGATGAGACTGATAGAGAAACAGGTCGCTCCAAGGGTATTTCATCAGTTCCCATCCATCTCAGTATCTACTCTCCTAATG TTGTCAATCTGACACTGGTTGATCTTCCGGGACTTACAAAAGTTGCTGTTGAGGGTCAACCAGATAGCATTGTGCAAGAC ATTGAAAATATGGTTCGGGCCTTTATCGAAAAGCCGAATTGCATCATTTTGGCAATATCTCCTGCTAATCAAGACCTTGC TACTTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCCAAAGGGGAAAGGACATTTGGAGTTTTGACAAAGATTGATC TTATGGACAAAGGTACTGATGCAGTTGAAATCCTTGAAGGTAGATCATATAAGTTAAATTACCCTTGGATTGGTGTTGTT AATCGCTCCCAAGCTGACATCAACAAAAGTGTTGATATGATTGCGGCTCGACGTAGAGAGAATGAGTATTTTGCAAACAC CCCAGAATATAGACATCTTGCTAGCAGGATGGGCTCTGTGCATCTAGGAAAGGTGATGTCTAAGCATTTAGAAACTGTTA TCAAGTCTCGGATCCCAGGGCTTCAATCACTCATTAACAAGACTATTATTGAGTTGGAGACAGAATTGACCCGTATTGGG AAACCTATTGCCGCTGATACTGGAGGGAAGTTGTACATGGTAATGGAAATCTGTCGAACTTTTGATCAGATATTTAAAGA TCATCTTGATGGCATACGATCTGGTGGTGAGAAAATTTACCAAGTATTTGATAATCAATTTCCAGCAGCTCTAAAAAGGC TGCAGTTTGACAAGCATCTATCAATGGACACTGTACGCAAACTAATAACTGAAGCAGATGGGTATCAACCTCATCTCATT GCTCCTGAGCAAGGATATCGCCGACTTATTGAATCTTGCATAGTATCAATGAGAGGCCCTGCTGAAGCAGCAGTTGATGC TGTTCATGGAATTCTGAAGGATATGATTCACAAGTCTATGAGTGAGACAATGGAATTAAAGCAGTACCCTACCTTGAAAG TCGAGCTCGGAAGTGCAGCTGTTGATTCACTGGAAAGGATGAGAGAAGAAAGTAAGAAAGCAACTCTGCAATTAGTAGAC ATGGAATGTGGTTATTTGACAGTTGAATTCTTTCGCAAACTTCCTCAAGACGCAGAGAAGGGCGGAAATCCAACCCACTC ACTTTTTGACAGATATAATGATGCTTATCTTCGTCGAATTGCTACCACTGTCTTGTCATATGTGAACATGGTATGTGGGA GTCTAAGGCATACCATTCCCAAGTCTGTAGTTTATTGTCAAGTGCGGGAAGCAAAGCGCAGTTTACTGGATCATTTCTTC ACAGAGTTGGGGAAAAAAGAGGGTAAACAACTAGCTGCATTGCTGAATGAGGATCCAGCAATCATGCAGCAAAGGACCTC ACTTTCTAAGAGGTTAGAGCTGTATAGAAGTGCCCAATCAGAAATTGAGGCTGTTGCATGGGACAAGTAA
Protein sequence (LotjaGi3g1v0395300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENLIQLVNKIQRACTALGDHGEESALPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKID DSREYAEFMHLPRKRFTDFAAVRQEIADETDRETGRSKGISSVPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVQD IENMVRAFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVEILEGRSYKLNYPWIGVV NRSQADINKSVDMIAARRRENEYFANTPEYRHLASRMGSVHLGKVMSKHLETVIKSRIPGLQSLINKTIIELETELTRIG KPIAADTGGKLYMVMEICRTFDQIFKDHLDGIRSGGEKIYQVFDNQFPAALKRLQFDKHLSMDTVRKLITEADGYQPHLI APEQGYRRLIESCIVSMRGPAEAAVDAVHGILKDMIHKSMSETMELKQYPTLKVELGSAAVDSLERMREESKKATLQLVD MECGYLTVEFFRKLPQDAEKGGNPTHSLFDRYNDAYLRRIATTVLSYVNMVCGSLRHTIPKSVVYCQVREAKRSLLDHFF TELGKKEGKQLAALLNEDPAIMQQRTSLSKRLELYRSAQSEIEAVAWDK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 609 | 609 | 0.0 | ||
| PANTHER | 1 | 609 | 609 | 0.0 | – | |
| SMART | 1 | 250 | 250 | 2.8E-116 | ||
| Gene3D | 2 | 318 | 317 | 8.9E-116 | – | |
| SUPERFAMILY | 7 | 307 | 301 | 5.51E-72 | ||
| ProSiteProfiles | 31 | 299 | 269 | 56.923 | ||
| PRINTS | 34 | 52 | 19 | 2.8E-59 | ||
| CDD | 34 | 299 | 266 | 1.17912E-128 | ||
| Pfam | 37 | 212 | 176 | 1.0E-53 | ||
| PRINTS | 59 | 76 | 18 | 2.8E-59 | ||
| ProSitePatterns | 60 | 69 | 10 | - | ||
| PRINTS | 131 | 148 | 18 | 2.8E-59 | ||
| PRINTS | 181 | 199 | 19 | 2.8E-59 | ||
| PRINTS | 200 | 216 | 17 | 2.8E-59 | ||
| Pfam | 221 | 487 | 267 | 5.0E-62 | ||
| PRINTS | 223 | 242 | 20 | 2.8E-59 | ||
| Gene3D | 324 | 575 | 252 | 1.7E-49 | – | |
| SMART | 512 | 605 | 94 | 7.4E-31 | ||
| Pfam | 514 | 605 | 92 | 1.3E-21 | ||
| ProSiteProfiles | 517 | 609 | 93 | 22.321 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0395300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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