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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0399600 |
| Transcript ID | LotjaGi3g1v0399600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FtsH; TAIR: AT2G46620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|F4IJ77|AATP4_ARATH AAA-ATPase At2g46620; TrEMBL-Plants: tr|I1KHS5|I1KHS5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0399600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:80128230..80134158) extracted from Lotus japonicus Gifu genome v1.2.
CCAAAAAAGTTGGCCATCAGTCTAACACAAAAAAAATTAAAAATTACATTGAAATTAAGAAATTGGCATGGCTCTTTTTT CTTAATTCCGTGTTGAAAAGGAAAATTAAGATAGCAGATATGATTACGTAACACAGTGTACATAATAAAATAGGTATATT CCCAATTTGAAAATGGAAATCTGAAAATTAGTTGAAGGAGGATAACAAAACATTAAACACGTCAACACTACATAGAATAG AAGAATACAACACGTATAGCTGCAACCAATAAAAGACTCCATCCATTGTAGATTGTTCCTCAAAACCAAACAACGATTCT TCTTCTTCCACCACCACCATCCAACTATGTGATTAACAACACTCACATATACACCCAGTTTCTTCATAATTGCCATGGTT CCTTGGAGACCCATATTCCTCGTTATCCTCATCACTGGTCTCCTTTGTTTCGTGATTCGTTTGATCCTATTCAAAACTGG ATTGTTCCACACCGTGAACAAACTTCACAGAACGTTCCAAGATTGGTTCCACGTGTACCAGTTCCTCAAGGTTCCTGAAT TCAACGAAAGCATGCAGCGAAACCACCTTCATCGTAAGGTTTCTCTCTATTTGCATTCTCTTCCTTCGATTGAAGACTCT GATTTCACCAACCTCATCACCGGGAACACCCAAAACGACATCGTTTTATGCCTCGACCAGAATCAAACCATAGAGGACCA ATTTCTCGGTGCCACGATTTTCTGGTTCAACCAGAAAACTGAACCGGACCGGACCGGAGGGTTTGTGTTGAAAATCAGAA AGGCTGATAAACGCCGCATCCTCCGCCCTTATCTCAGCCACATCAACGCCGTCGCCGACGAGATTGACAGCCAAGGGAAA CGCGATTTGCGCGTGTTCGTCAACGGCGGCGGCGGAACGCGGTGGAGATCGGTCCCGTTCAATCATCCGGCGACGTTTGA AACCATGTCGATGGAGGAAGATCTCAAGGAGAAAATCAAATCGGATCTGGAATCGTTTCTGAAAGGGAAGCAATACTACC GGAGACTCGGCCGCGCGTGGAAACGGAGCTTCCTGCTGTATGGCCCTTCCGGCACCGGGAAATCGAGCTTTGTTGCGGCG ATGGCGAATTTCATGTGTTACGATGTGTACGACGTGGATCTCTCCAAGGTTCGCGGCGATTCGGATCTGAAAGTGCTCCT TCTCGAAACGACGGCGAAGTCGATCATCGTCGTGGAGGATCTCGACCGGTTTCTGACGGTGGGATCGGAACCAGCGGCGG TGACGGCGTCGGGGATTCAGAATTTCATGGACGGGATTCTGAGCTCGTGCTGCGGTGAAGAAAGAGTGATGGTTTTCACG ATGAATAGCAAAGATGGTATCGACCCGAATTTGCTACGTCCGGGTCGGGTCGACGTGCATATCCATTTCCCGGTTTGCGA TTTCTCGGCGTTCAAGACGCTAGCGAGTAGCTACCTAGGGGTGAAGGAGCACAAGCTGTTTCCTCAGGTGGAGGAGATTT TCCGGCAAGGAGCGAGTTTGAGTCCGGCGGAGATCAGTGAGTTGATGATCGCGAATCGGAACTCGCCGAGTCGGGCTATA AAATCGGTAATCGGGGCGCTGCAAACGGACGGTGATGGGAGGGGGTGTGGGGATGTGATCGGACGGCAGGGAGGGGATGA TGATGAAGCGGTGCCTGAAGGGTTGTTGTGTGGTGGTGAGGGGTTCTCTGCGGTTAAGGATTTGCGGAAGTTGTACGGTT TGTTTAGATTAAGGAACTCTAGGAAATCTCGCTCGTCTAGTAATAACTTGGTCCATGAAAGATGATGATGATGATGATAT GTCAATGTTGTTGGTTTTGAAACTTTTTGGCAGGTTTAGGGAGGGTTTTTGTTTTGTTCATAAACAAACAAATTAGATAT TGCATTTATTTATTGGTTGGATTGGATACCTCCATGTAATGTTGTTCATATTGGTACTTTAGGAGTGATTTGTTTGGGAT GTTTTTAGGGGTGGATGTAAAAATGTTAGAATTTGAAAGATGATTGATATAGGAAAAGTATTGGCAAACAAAGACTTATC ATGTATATAGTTTTTTTGGGAACAAAAACCACCAAGTATATTATATTGTTTCCCCCATTTTCATGGATGGGGAAGTCAAT TGAATCTCATGGCATGTAACATTGAATACTTTTGTGTTCACCATTCAAATCCACCCTCCTTGATGATATTTGAAGGGAGG GGAGAAAAATGTGTGATATGATATGTGATTTGACAGAAAATGTAAAGAGAAATAAGAAAAAAAATTGAAAAGTAAGAGAA ACTGGAGTGTGTATAAATCACGCTTGAATTTCACTTACACTAGAAGAGAAATTAATAAAACAGAAATATGATAGATGATA GGTGATGTGATTCCGGAAAGAAAAGAGATATTGATGAGACTAATTTGGTCAAATTACCCAAAAAGAGTCATTGAGGAAGA ACAGTTGAACTCCGATGTTGGGGTAGATGAAAGAAGCTCCAGTAGTGCGAGAGGGAGGGTGCTCTGGTACCAAACACCAT TGTCAAGTCCGAGAGAGGTCCTGCAAAGACACTCTAATGCCTTTTGTTAGTGGTTGGAGAGTTTGGAATTTCTCTAGGAC TTGAAGTGAGAAGTGTGTACTTATTTCAGCTGGGTCTCAGCCTTTTATACCTGCCTGTAGGGTGGAGTGACCTAGAGAGA TGTCATGAGTTCCTTGTTCCCGAGTAAATGGGTGATTCTCTACTAGGATTGCATCTGTTTTGGTCTGGATACAGCGTGGC TGTGAGGACTCTGTCATGTCCTGTTCTTTGGAGTTGCTCTTCTTCATGTAGGCTGAGGTTGCTTTGATGGGATCTGGAAA ATTTTGTGAGCTCTTGGAAGTGGATACCTGAACAAGTTGTTGCTGCAATATCTGCAGGAAATGTGTTAAAAGTTTACTCT ATTAAGTCTGAATTTCTGATCAAGATAGGTGATATTATGCTGCAATTCAATGCATACATAGTGGTTGTAGACTTGTAGTT GTTTAAGAAAACTATGTAATGATTTGATTTCATCTCTTGTATGTGGGTCTAAGACTAGCATCTGAATATGAGCCTGTTCT CAGTTTAAAGGTTGAAAGAAAGATAAAAGATGGCTACTTGGTCTTAGTTACTTCTGACTTTGAGGAGTCCTTCAACCCTC TCAAATTTGGCCAAATGAAACCCCCTTTACTGTGATACAGATACTTCAATGCAATCCTGCAGTGTTGGGTGTATGGATAC ACCTGTATAAGTGGTTCATTCAGAAGAGAAATGTTATCATTGTTATTAGCACTTTTTAATTAAAAAAATCTCATCATTGT TATCTGTTTGATGGCAAGTGTGGTACTAATGCTGCTGAGGAAATTGATCCACTAACAACTTGCTTGCCTGATGATCCACC AACAACTAGTGATGTGCATGCTCATTGGGTAACCCTGACTTTGACTTTTCAACTGCTGATTGATTCCTTGCGACTCTTAA ATTAGTATATTAGTGATTTCTTTTGCTGTGGTTTGATTCTATAGATGAATTACAGGGTGGGACATCATATTGCAATCAGT TTCCTAGCTCTAAGAGGGAAGAGAGTTTCTGTTATAAAGAAGTATGAAGCACCAAATGTTAAAAAAGGAGAAGAACAAGA AAATGGAGTCAATTAGAAGGAGCTAGCAATGCGGAAAGTATTAAACAAAGTATGGTTGTTCTAACAAGTTATGATATATT TCTTCAGTATTCACCCATGACTTTGTAGCACACTTATACCTTGATGTAATTTTTTGAATTTAAAGTATGTAACCATGAAT CATTTGTATATCTGTTAGAAAGTATGAAACTGGAAAATAACATATTCTTGTGCCCTTTTTTTTGAAGTCGCAACTTGATT TATTAGATAAGTTACCTTTTAAGTGAGTGTTCTAAATATTAGAAGTTAATTTGTTTAAAATTTAGTGAAAGTTCTAAACT GCCAGCAATGCACAATTTTACTGCATATTGTGTTAAGTTATAATCATAATGAAAGAGGACAATTACTATTGAATTCAGAG CATGGAAGCTAGACCAAATGAAATCAGTTCAGCCTCACCCACTAGTAACCAGACACATCTATATATATACTTTCAAATCA AGTAAACTTAGATCTTGATAAAAAGATTAACAAGAGCATGAAGACAACTTCTTCATCTCACTAATTTCCAATTCAGGACC TGAGATTATTGCTATCTTTGATCCTTTGAGTGTGGCAGCATCATTGTCACCATTCCCTTTCCCAACACCACATTCCAATG TCTTTTTACAGACCACCCTGTTGATCTCTTCTAGCAATTTGAGAAATGCACTCTCCACATTCTCACCACTGAGAGCTGAA GTCTCTGAGAAGAACAGGCCCTGCTCCTCTGCATACTCCACTGCATCTTCAGTTGGGACCACTCTCAGGTCCACAAGATC ACCTTTGTTCCCAACTAGCATGATCACAATGGAGCTATCTGTGTGTGCTCGGAGTTCCTCAACCCACCTCGCAATATGAT CAAAGGATTGCCTCTTAGTTATGTCATACACCAGCATGGCCCCTAATGCACCTCTGTAATATGCACTAGTTACAGCCCTG TACCTATATCAGCAACAAAATTTACAGTCAAAAGTGTGAGAATTTATCTGCATTCCAATGATCATGTATTTTCCTTACAT TTGTCAATAAATTTTATCTTTGAATGCATTTCCTTTGCCATTAATGCATACAGTTTGCTTGATGAATCATGGCCTTAAGG GATTGTACTTATTGAACTTTTAAATTCATTGAGTTCTAGCTTTCTTTTTCCTGATTTCAAAAAGTAAGTTTTCTTTTTCC AGAGCTGAGTATAATCTGTATGTGAAATCTGGCCAATTGAATGGGCTTAGATGTTGAGAAGCAATACAATCTACTAAAGC TGCTCACTTTCTCATTATAACCCCTTGTTGGAGTATTAATGTGGCTTATTTTGAGACCAAATCAAGGAGAATGAAATACT TATAGTACTTAAGTCAAAATCATGTGATTCTTGTTAACATATGTTTCTGAAGTCAAAATGGTATCACATTGTAAAATGTT ATATCTTTGACTTGGTACCATCTTTGAAACTCAATATCCTCCCTTTAGTTCAAATGAGAGACAAACAAAGTAGACCAAGA TATTCAGCCCAAGCAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTCAGAGAGAGA GAGAGAGAGAGGTGTGATAAACCTTTCTTGGCCAGCAGTATCCCAGATCTGGGCTTTGATGACTTTGCCATTGATAGTGA CAGTCCTAGTCTGGAATTCAACTCCAATGGTGGACTTAGAGTCAAAGCAGAACTCATTCTTTGCAAACCTTGAGAGTATT TGAGTCTTGCCCACGGCTGAGTCCCCTATCACCACCACCTTGAACACATAATCTATTTTCTCCTCCACATCATAATCTGT TTTGTCTTGCCTCTTCTTAGCCTCAACCCCATTCATTCCCTGGCTCATTGTCTTCTCAAGACAGCAAGAGCCTTCAAAAA GGAAAAAAATCAACAGGGCCTGTTTTTCTTGCCCAAACTAGGCACACACCTTGGTTTTAGCCTTCCTCAGCATGTAAAAA GATAACTTGGGAACTCAAGTACTGGTCTTGGAGTTAAGTAGAAGCAAGTAAATGAACAGGGAAAAAGGTTGAAAAAAAGA TGAACCAGACAAGACCAAGGTTGAATGAATCACTAGTGGCAAAATAAATAGGTAAGGAAATGGGGTCCAGTCTGTCTTGC CTTTATTAGTATGATGAAGCACTGTTATCGGACTTTATTGCCTTGATGCTTTCTTCTGTTGATATATTATGGCATGTAAT TAATCATGT
CDS sequence (LotjaGi3g1v0399600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCCTTGGAGACCCATATTCCTCGTTATCCTCATCACTGGTCTCCTTTGTTTCGTGATTCGTTTGATCCTATTCAA AACTGGATTGTTCCACACCGTGAACAAACTTCACAGAACGTTCCAAGATTGGTTCCACGTGTACCAGTTCCTCAAGGTTC CTGAATTCAACGAAAGCATGCAGCGAAACCACCTTCATCGTAAGGTTTCTCTCTATTTGCATTCTCTTCCTTCGATTGAA GACTCTGATTTCACCAACCTCATCACCGGGAACACCCAAAACGACATCGTTTTATGCCTCGACCAGAATCAAACCATAGA GGACCAATTTCTCGGTGCCACGATTTTCTGGTTCAACCAGAAAACTGAACCGGACCGGACCGGAGGGTTTGTGTTGAAAA TCAGAAAGGCTGATAAACGCCGCATCCTCCGCCCTTATCTCAGCCACATCAACGCCGTCGCCGACGAGATTGACAGCCAA GGGAAACGCGATTTGCGCGTGTTCGTCAACGGCGGCGGCGGAACGCGGTGGAGATCGGTCCCGTTCAATCATCCGGCGAC GTTTGAAACCATGTCGATGGAGGAAGATCTCAAGGAGAAAATCAAATCGGATCTGGAATCGTTTCTGAAAGGGAAGCAAT ACTACCGGAGACTCGGCCGCGCGTGGAAACGGAGCTTCCTGCTGTATGGCCCTTCCGGCACCGGGAAATCGAGCTTTGTT GCGGCGATGGCGAATTTCATGTGTTACGATGTGTACGACGTGGATCTCTCCAAGGTTCGCGGCGATTCGGATCTGAAAGT GCTCCTTCTCGAAACGACGGCGAAGTCGATCATCGTCGTGGAGGATCTCGACCGGTTTCTGACGGTGGGATCGGAACCAG CGGCGGTGACGGCGTCGGGGATTCAGAATTTCATGGACGGGATTCTGAGCTCGTGCTGCGGTGAAGAAAGAGTGATGGTT TTCACGATGAATAGCAAAGATGGTATCGACCCGAATTTGCTACGTCCGGGTCGGGTCGACGTGCATATCCATTTCCCGGT TTGCGATTTCTCGGCGTTCAAGACGCTAGCGAGTAGCTACCTAGGGGTGAAGGAGCACAAGCTGTTTCCTCAGGTGGAGG AGATTTTCCGGCAAGGAGCGAGTTTGAGTCCGGCGGAGATCAGTGAGTTGATGATCGCGAATCGGAACTCGCCGAGTCGG GCTATAAAATCGGTAATCGGGGCGCTGCAAACGGACGGTGATGGGAGGGGGTGTGGGGATGTGATCGGACGGCAGGGAGG GGATGATGATGAAGCGGTGCCTGAAGGGTTGTTGTGTGGTGGTGAGGGGTTCTCTGCGGTTAAGGATTTGCGGAAGTTGT ACGGTTTGTTTAGATTAAGGAACTCTAGGAAATCTCGCTCGTCTAGTAATAACTTGGTCCATGAAAGATGA
Protein sequence (LotjaGi3g1v0399600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVPWRPIFLVILITGLLCFVIRLILFKTGLFHTVNKLHRTFQDWFHVYQFLKVPEFNESMQRNHLHRKVSLYLHSLPSIE DSDFTNLITGNTQNDIVLCLDQNQTIEDQFLGATIFWFNQKTEPDRTGGFVLKIRKADKRRILRPYLSHINAVADEIDSQ GKRDLRVFVNGGGGTRWRSVPFNHPATFETMSMEEDLKEKIKSDLESFLKGKQYYRRLGRAWKRSFLLYGPSGTGKSSFV AAMANFMCYDVYDVDLSKVRGDSDLKVLLLETTAKSIIVVEDLDRFLTVGSEPAAVTASGIQNFMDGILSSCCGEERVMV FTMNSKDGIDPNLLRPGRVDVHIHFPVCDFSAFKTLASSYLGVKEHKLFPQVEEIFRQGASLSPAEISELMIANRNSPSR AIKSVIGALQTDGDGRGCGDVIGRQGGDDDEAVPEGLLCGGEGFSAVKDLRKLYGLFRLRNSRKSRSSSNNLVHER
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 26 | 21 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| PANTHER | 16 | 469 | 454 | 2.0E-203 | – | |
| PANTHER | 16 | 469 | 454 | 2.0E-203 | – | |
| Phobius | 27 | 476 | 450 | - | – | |
| Pfam | 30 | 118 | 89 | 1.8E-10 | ||
| SUPERFAMILY | 155 | 404 | 250 | 9.87E-46 | ||
| Gene3D | 178 | 347 | 170 | 7.1E-34 | – | |
| SMART | 222 | 349 | 128 | 9.6E-5 | ||
| CDD | 223 | 346 | 124 | 3.29663E-7 | – | |
| Pfam | 227 | 346 | 120 | 2.8E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi3g1v0399600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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