Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0445200 |
| Transcript ID | LotjaGi3g1v0445200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lectin receptor kinase; TAIR: AT4G28350.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|O49445|LRK72_ARATH Probable L-type lectin-domain containing receptor kinase VII.2; TrEMBL-Plants: tr|I1M3S1|I1M3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0445200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85847236..85850034) extracted from Lotus japonicus Gifu genome v1.2.
GAGCGATCTGTAAAATTATTTGTAAGTAACTTATATAGCCTTTGAAGCACGTCTTCACGCGTGAGGTGATAGGAGCCGAA CTCACTCGATTTTTTCATTTATATTTTGCTGTTAATGTTGCCACTCCTAACTTTCCATCAAGTCCACTTTCAACTCTTTT GTTGTTTTTCTCACCACCACCCACCAACCAATACATGTGTTTGTTCTGGTAAATGAACCTCGTTTAAACAAAACCTTGCT TCACCATCTTCATTCTTCACTTTCTCATTCATTCATTCTTTGTTCTTCCTGCTTAACTTCAATGTCTCCTCGTACCTCAT GCTTCCTTTTCATCCTCAACACTGCTTTTCTTCTAGTTCTAACTTCAGTTTCAGCAACTGAATTTGTCTATAACAGAAAC TTCAACTCCACCAACACAAAGCTCTATGGAAATGCCACCATCAAAGAATCCATTCTCACTCTCACTAACCAAACCTTTTT CTCCATAGGCCGTGCCTTTTACCCTCAAAGTGTTCCAATGAAGAAGCCTCACAATCACAACTCTTCCACCCTTCTTCCTT TTGCAACCTCTTTCATCTTCTCCATAGCTCCTTGCAAGAACTTCCCTGTAGCTCACGGTTTCGCTTTCGTTATCGCGCCC GTGATGGCTGTGAACGGAGCGCTTTCGGGGAATTATCTCGGGCTTTTTAACCGATCCTCTTCTGGTAACTCCTCCAACCA TGTTTTTGCAGTTGAGTTTGATGATTTTCGAAACGAGGAGTTTAATGAGGAGAATGATAACCATGTGGGTGTCAACTTGA ATTCAATGATTTCATTGTATTCTGAGCCTGCTGGGTTCTGGGGTGGGGAAAACGGTGACGATCTGGAGAAGTTGAAGCTG GCTAATGGTCAGAACTATCAGGTTTGGATAGAGTATGAGAATTCACAGATTAATGTTACTTTGGCACCTGCAGGGAAAAA GAAGCCTAAAAGACCATTGATTAGTAAGTATTTGAACCTTTCTGGTGTTTTGTTGGATGAAATGTATGTGGGATTTTCTG GAGCAACAGGAAGAATGGTGGATGTTTGTAGAATCCTAGCTTGGAGTTTTAGCCATTCAAATTTCTCAATTGGTGATGCT TTGAACACCAAGCATTTACCTTTGTTTATGGTTCAAAGGAGAATTGTATATAGATCAAATGGTTTCATTCTTGGTGTCAT TTTTGGTGCACTGTTTGTCAGTGTTTGCTGCTGCACTTTGGTGTTCTTAGTTCTGTTCAGGACCAGAAGGGGAGAAAAAG AGGAAGAGGAAAAAATTGAAGATTGGGAATTGGAGTATTGGCCACAGAGGATCAGCTATCAGGAGATTTACGACGCGACA AACGGGTTCTCTGAAGAGAAAGTGATCGGCATAGGTGCGACCGGGAAAGTATACAAAGGAGTTTTGAAAGGGGTGGAAGT CGCGGTGAAGAGATTCAACCACGACACGCAGCAACACGGAATGAGAGAGTTTCTGGCAGAGATTTCAAGCCTAGGAAGAA TGAAGCACAGGAACTTGGTTGGTTTCAGAGGATGGAGTAAAAGAAAAGGAGGGAAATTGATACTGGTGTATGATTACATG GAGAATGAGAGCTTGGATAAACGGATCTTCGAGTGCGAAGAGACCATGCTTCTGAGCTGGGAAGAAAGAAAAGGAGTTTT AGAAAATGTAGCTTGTGGAATTTTATACCTACATGAGGGCTGGGAGGTTGAGGTTTTACAAAGAGACATCAAAGCAAGTA ATGTTCTGCTTGAAAAGGACATGCATGCAAGATTAGGAGACTTTGGGCTTGCAAGGTTGCATCAAAAGGATCAAGTGGCT GAAACAACAAGAGTAATAGGGACTTTAGGGTACATGGCACCAGAGCTAGTCAAATTTGGGAAACCATCAACTGCAACTGA TGTGTACAGTTTTGGAATATTAGTTTTAGAAGTGGTATGTGGGAGAAGACCTATTGTGGCGGATAAGCTGCCGTTGGTTG AATGGGTGTTTTCCCTTATGGAGAAAGGGGAATTGAGTTGTGCCATTGATGAGCGTTTGAAGGCTCAAAGTGGCTATAGA AATGAGGAAGCTGAGAGATTGCTTCACTTGGGTTTGTTATGTGCAAGTGTAGACCCTTGTGTTAGGCCAAGGATGAGGCA AGTGGTGAAAATGTTGGAGGGGATAAAATGCAGTGATGAGTGTAATGAAGAGTGTGTCCATGTCAATGTGAGTCTGATTG GGAAAATAAACTCTGCAGCATCATGGTCTAGGAGTTCTACAAGCTCTCCCCAAATGAAATTTCCAACCTTTGCTGAAATT TTCCCCTCCAAATATTATTCTACAGCATCTTTTTTAAGCATCTCTTGTAACAGCCCTCAGCCAGATTCAGATTTTGTATC AGAAGGAAGGTGAAAACTAAAATTCATTCTATCACTATGGTAGTGTGTTTGGACACCTAAAAGCACTTCCATTTCAATCT ATTGAGACATAGATTTCACGAAAAAAGCATTGCTGTTGTCAGGTGGGAAACATTTCCATTTGTATAGTACAAGTACTTTT GCACCATATGTCTTGAGTTTCACTAAATTTGGGATCTCAAGTTTCAACTTTCAACTGCTAAGGAAGGGGTGTTTTTTTTG TCCTTTTCTATGCCATACAATTCTTTCTTTTTCTTTTAGTTCTTGTATCTTTAGTTATATGAAGAGGGGTTGAGGGAGGC TAAAAAGAACATTGAAAGATAGTTTTAAAAAATGACTCACTATCAATAATATCCCTCAAAATCTGATTTTTTATCGAGA
CDS sequence (LotjaGi3g1v0445200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCCTCGTACCTCATGCTTCCTTTTCATCCTCAACACTGCTTTTCTTCTAGTTCTAACTTCAGTTTCAGCAACTGA ATTTGTCTATAACAGAAACTTCAACTCCACCAACACAAAGCTCTATGGAAATGCCACCATCAAAGAATCCATTCTCACTC TCACTAACCAAACCTTTTTCTCCATAGGCCGTGCCTTTTACCCTCAAAGTGTTCCAATGAAGAAGCCTCACAATCACAAC TCTTCCACCCTTCTTCCTTTTGCAACCTCTTTCATCTTCTCCATAGCTCCTTGCAAGAACTTCCCTGTAGCTCACGGTTT CGCTTTCGTTATCGCGCCCGTGATGGCTGTGAACGGAGCGCTTTCGGGGAATTATCTCGGGCTTTTTAACCGATCCTCTT CTGGTAACTCCTCCAACCATGTTTTTGCAGTTGAGTTTGATGATTTTCGAAACGAGGAGTTTAATGAGGAGAATGATAAC CATGTGGGTGTCAACTTGAATTCAATGATTTCATTGTATTCTGAGCCTGCTGGGTTCTGGGGTGGGGAAAACGGTGACGA TCTGGAGAAGTTGAAGCTGGCTAATGGTCAGAACTATCAGGTTTGGATAGAGTATGAGAATTCACAGATTAATGTTACTT TGGCACCTGCAGGGAAAAAGAAGCCTAAAAGACCATTGATTAGTAAGTATTTGAACCTTTCTGGTGTTTTGTTGGATGAA ATGTATGTGGGATTTTCTGGAGCAACAGGAAGAATGGTGGATGTTTGTAGAATCCTAGCTTGGAGTTTTAGCCATTCAAA TTTCTCAATTGGTGATGCTTTGAACACCAAGCATTTACCTTTGTTTATGGTTCAAAGGAGAATTGTATATAGATCAAATG GTTTCATTCTTGGTGTCATTTTTGGTGCACTGTTTGTCAGTGTTTGCTGCTGCACTTTGGTGTTCTTAGTTCTGTTCAGG ACCAGAAGGGGAGAAAAAGAGGAAGAGGAAAAAATTGAAGATTGGGAATTGGAGTATTGGCCACAGAGGATCAGCTATCA GGAGATTTACGACGCGACAAACGGGTTCTCTGAAGAGAAAGTGATCGGCATAGGTGCGACCGGGAAAGTATACAAAGGAG TTTTGAAAGGGGTGGAAGTCGCGGTGAAGAGATTCAACCACGACACGCAGCAACACGGAATGAGAGAGTTTCTGGCAGAG ATTTCAAGCCTAGGAAGAATGAAGCACAGGAACTTGGTTGGTTTCAGAGGATGGAGTAAAAGAAAAGGAGGGAAATTGAT ACTGGTGTATGATTACATGGAGAATGAGAGCTTGGATAAACGGATCTTCGAGTGCGAAGAGACCATGCTTCTGAGCTGGG AAGAAAGAAAAGGAGTTTTAGAAAATGTAGCTTGTGGAATTTTATACCTACATGAGGGCTGGGAGGTTGAGGTTTTACAA AGAGACATCAAAGCAAGTAATGTTCTGCTTGAAAAGGACATGCATGCAAGATTAGGAGACTTTGGGCTTGCAAGGTTGCA TCAAAAGGATCAAGTGGCTGAAACAACAAGAGTAATAGGGACTTTAGGGTACATGGCACCAGAGCTAGTCAAATTTGGGA AACCATCAACTGCAACTGATGTGTACAGTTTTGGAATATTAGTTTTAGAAGTGGTATGTGGGAGAAGACCTATTGTGGCG GATAAGCTGCCGTTGGTTGAATGGGTGTTTTCCCTTATGGAGAAAGGGGAATTGAGTTGTGCCATTGATGAGCGTTTGAA GGCTCAAAGTGGCTATAGAAATGAGGAAGCTGAGAGATTGCTTCACTTGGGTTTGTTATGTGCAAGTGTAGACCCTTGTG TTAGGCCAAGGATGAGGCAAGTGGTGAAAATGTTGGAGGGGATAAAATGCAGTGATGAGTGTAATGAAGAGTGTGTCCAT GTCAATGTGAGTCTGATTGGGAAAATAAACTCTGCAGCATCATGGTCTAGGAGTTCTACAAGCTCTCCCCAAATGAAATT TCCAACCTTTGCTGAAATTTTCCCCTCCAAATATTATTCTACAGCATCTTTTTTAAGCATCTCTTGTAACAGCCCTCAGC CAGATTCAGATTTTGTATCAGAAGGAAGGTGA
Protein sequence (LotjaGi3g1v0445200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPRTSCFLFILNTAFLLVLTSVSATEFVYNRNFNSTNTKLYGNATIKESILTLTNQTFFSIGRAFYPQSVPMKKPHNHN SSTLLPFATSFIFSIAPCKNFPVAHGFAFVIAPVMAVNGALSGNYLGLFNRSSSGNSSNHVFAVEFDDFRNEEFNEENDN HVGVNLNSMISLYSEPAGFWGGENGDDLEKLKLANGQNYQVWIEYENSQINVTLAPAGKKKPKRPLISKYLNLSGVLLDE MYVGFSGATGRMVDVCRILAWSFSHSNFSIGDALNTKHLPLFMVQRRIVYRSNGFILGVIFGALFVSVCCCTLVFLVLFR TRRGEKEEEEKIEDWELEYWPQRISYQEIYDATNGFSEEKVIGIGATGKVYKGVLKGVEVAVKRFNHDTQQHGMREFLAE ISSLGRMKHRNLVGFRGWSKRKGGKLILVYDYMENESLDKRIFECEETMLLSWEERKGVLENVACGILYLHEGWEVEVLQ RDIKASNVLLEKDMHARLGDFGLARLHQKDQVAETTRVIGTLGYMAPELVKFGKPSTATDVYSFGILVLEVVCGRRPIVA DKLPLVEWVFSLMEKGELSCAIDERLKAQSGYRNEEAERLLHLGLLCASVDPCVRPRMRQVVKMLEGIKCSDECNEECVH VNVSLIGKINSAASWSRSSTSSPQMKFPTFAEIFPSKYYSTASFLSISCNSPQPDSDFVSEGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 7 | 20 | 14 | - | – | |
| PANTHER | 9 | 677 | 669 | 1.9E-299 | – | |
| PANTHER | 9 | 677 | 669 | 1.9E-299 | – | |
| SUPERFAMILY | 18 | 266 | 249 | 8.86E-62 | ||
| Phobius | 21 | 25 | 5 | - | – | |
| Gene3D | 24 | 278 | 255 | 1.2E-63 | – | |
| Pfam | 26 | 267 | 242 | 1.7E-64 | ||
| CDD | 26 | 264 | 239 | 7.54438E-73 | ||
| Phobius | 26 | 294 | 269 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| TMHMM | 295 | 317 | 23 | - | – | |
| Phobius | 295 | 319 | 25 | - | – | |
| Phobius | 320 | 703 | 384 | - | – | |
| Gene3D | 325 | 432 | 108 | 7.5E-26 | – | |
| SUPERFAMILY | 334 | 627 | 294 | 1.97E-70 | ||
| SMART | 356 | 625 | 270 | 7.1E-27 | ||
| ProSiteProfiles | 356 | 628 | 273 | 35.524 | ||
| Pfam | 357 | 623 | 267 | 2.5E-42 | ||
| CDD | 362 | 628 | 267 | 2.27058E-85 | – | |
| ProSitePatterns | 362 | 383 | 22 | - | ||
| Gene3D | 433 | 647 | 215 | 6.8E-52 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi3g1v0445200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…