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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0483700 |
| Transcript ID | LotjaGi3g1v0483700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RING/FYVE/PHD zinc finger protein; TAIR: AT2G27980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A0L9V6F0|A0A0L9V6F0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0483700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90113337..90119103) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGTTCAAACCATTCTCAATTCTCTCAATTTCTTCTGCAACCCTAATTTCCCAATTTCCCATTTCTTTAATACGTGTC TCTTTCTTTCACATCAACTCCTCTTTTCTCCAACCCAATTCTCAGTTCTCCTGATTTCTCCACAAAACCTAATTTTCTCT TTTCCCATGTCTTTCACCTCAGGTGTGGGTAACGTATGGTAATCCTAGTCACTGAGTTGATTTCACCATTTGATAAAACC AAAACACTCTTCGCAACCACATCCTTTCATCTTTCTCCAACCCAATTCTCAATTCTCGTATCTCCTTAAAACCCTAATTT GTCCATTTCCCATTTCTTTCACCTCGTGTGGTAGGTAACATATCCCAATCTCAGTTGCAGGATCAATTTCTGTGTTTTGG AAAACAAATACATCCCTCACATTCCTCAAGGTAATTAACCTTCAAACCTTATTGTGCCTTTGCTTTATCGCCCATTCTCT CAATTTTCACGATTTTATCTCAAATGCCTAATTTTTTTCTTTTCCATTTGTTTAATCTCGTGTGTGGGTAACACGTTGTA ATCCCAGACGCCGATCTGATTTGAGCATTTGATAAACACACACAACGCTCTTCGACTTCCTTAAGGTAACCGAGCCTCAA ACCCATTCTCGTGCTTTATCATCATTTTCTCCATTCTCCGGTTCAATTATTAAATTTCCAAATTTCTTATTCAAACCCTA ATCCTCCCCCTTTCCCAATACTTTTTTGTGTTTGGTAGGAAACATTGAAACAATGACTTAGCGCATCGATCCAGTGATCC GCGGATCCATGGCGAACGATACAAATCTGGAGCAATTCATGGTAAATTCCAAAGGTCTCAAGAGGGAACATGCAAATGTT GACGCCCAATCTCATACCGGTGGGCCCCACGGTCTAAACCAACCCGATACAAACCGGAATCTGGTTCAGTTTCCGGCTAA TAAGAGGTCGAAGTCGTCCGGTTCATTGCATGAGAACCAGAATGGACCACTGGAGAAGAACGAGGAGGAGGCAAAGAGCG AAGTGGTGGACATTGAAATTGTGAGCGAGAATGAAGAACCCAGAACTGGTTTTGTCTCCAAGACTGCTTCTACCTCGAAA AAGGTCCCGTCTTGGAAGCTGAAGGATCTTCTAGCCTCAGGGATTCTTGAGGGAATGACAGTGCATTATATCAAAGGAAA AAGAGTATGGATTTATGTGTAACATTTTCAATTGTTGGTTATTCTTGTGTGTAGCGAGTTTTGCAATGTGATGATCCATT TTGGAGTTCTGAAATTTGGTTATGTGTGTGGGAATTTTTGTAGGCAAAGAAGCAAGAAGGCACAAGGCTTGAGGGAGTGA TTAGAGGCACTGGGATTGAGTGTTCTTGTGAAATTTGTAAAGGGAATGGGGTAAGTTAATGAAGATACCTTTTATGTTTG AGCAATCAATTCAGTATCATGTAAAATCTCATGCCATAACTTCTTTTATGATTTTTAATGGTGAGAGTAGGTTGTGGGAG TCACAGTTTTTGAGAAGCATGCTGATAGTGGACATAAACGCCCAGCAGAGTATATTCATCTTGAGAATAAGAAAACTCTC TGTGATGTCATGAATGCATGTTCAGACATTCCATTAGCCAATTTGGAGGAAGCTGTCCAAAACGTCCTTGCAGGGCTAAC TATGCAGAAATCTACCTTCTGTTTTAACTGCAGAGGTTTGGAGTTTTCGCTTTCGCTTTGAATCCTTTATTGGTATGTTT GCAACTTGCATGTTTATTCCAAACATTTTAACAAGTGATTTTGAATTGTGGTAGGTTCTTTTAAAGATGATGAAGCTGTG TCGAAACTATTATGCAATTCATGCACGACATTGAAGGACTGTCCGCCCAGCCCCACTCCAACAACTGAGAATAGCAATAC ATGTGTTTCACCATCAGTTGAATCCAGGTATATTTCTGTTTATCTGTCAATCTGAATCACTATATACATCAACATCGTGA AAACTTGTATTTGATTAAACAAATAAATAATACTTGCTATTGTTATATGATGTATTATTAAAGTTGACTGGAATTTCTGC ATCACATTTTATTTGTGATGATGGTATAACACCAGTTGTCTGACTATTTCAGATCCCCAAAACCAGATGTGCGTCCAAAG GGAATGAAACAAACACCATCTCATGGAAAGAATCTAGAACAACTAACTAAGACGTAAGTCTGTTTCCGTTGCACAAGTAT AAGATATTTGTACTTTGCACTATATTTGTGATCATTTATTAAATCTCATGCTTTAGTGTTGTCAGTGATATAATCTTATC CTTATCCTTGTATGTTCTTAAAACTCAGAAGGGATCTACAAATGCACAAGGCAGTATTTGGTGAATTGGCTGAGGGAGCT GAACTATCCTATCGTGCTCATGGAAAGGTTGCCATGACAACGACTTAATTTTTGTTTACTAGTTTTTATCACATTTTAAC TTTTCTATGCCTCAAGGATCAAATCCTTGGAGGAAAAAAAATTACTTTTCTGAATATGTTTTTGTTGTTTGAGCAGAAAC TATTGGTTGGTCACAAAGTGGGAAATGGAATTCGTTGCACCTGTTGTAACACTGTGGTACATTTTATTATGATGTAGAAT ATATATCGTCCCAACTTTACATTTGATAAGTTTTATATATTTAAAAAATGGATGTGCAGGTCAGCCCTTCTCGGTTTGAA GCACATGCTGGTTGTGCATCACGACGGAAACCGTGAGTTTTTTTGTTTAACCTTATTACTTGATGTTGGTATACCTGCTT TTGATTTATGCATTAAGTTTTACATTTAAAGGCTCATTATTTTTATATGTAGGATTTTGTCTTTATTTTACCTTTTTCCT TTTTCCCCACAATTTTCCAAGGATTTCATTATTATACAACCCAAGAATTGTGGTATGGTTCTTTGGGAATCAACTAAGGT TTTCTTTCTTGTTTAACATAAATTGATTTCTTTATTGCAGCTATCTGCAGATATATACATCTAATATGGTTTCACTCCAT CAGTTGTCCATTGATCTTTTAAAAAAGCGGAGTCTTTCTACCAAGGAACATGTTGATCTCTGCAGTTTATGTTCAAATGG AGGGGATCTTATCAGTTGTGATCGTGATAAATGCACAAGAGCTTTTCACCTAAGTGAAGTCTTGCTTTCCTTTTAATTTT AATTTTATTTTAAGAAACTACTCTGTTAGCTCTGCTATCTGCGTGCCAATAGAAGTATTGCTTGTAGCTGACTGATCATG GGCTTTGTATAAATTAAAATATACTTTTGCTTCGCTGAAACTTGAACTTTAAGTGCTCTTTTATGTCACCGGGCAATAAA TCATCCTTAGTGTTAGCATATTTTATGATGTTATTTGGATGAGAACTGAGATAACAAGTTTTAGTCTTCTTTTACAGAAT GTGCTCGTCTTCCTCGTATACCAAGTGGTTTGTGGTACTGCAAATATTGTGAGAATGAAACTCAGGAAAACAAAGATGTG GACCAGGGGAGAAGCTTTTTAGTCGAACATGATGAGGGCGGCCAGTGTGCATTGTGCGGGTAATGTCCTTTTCTTTTCAA GCTAGTGTTATTGTGAATTTAGATGTACTGTTTTTTAATATTTTTTTCTTATGCATCTTTTGTGCTTCATTAACGATAAA AAAAGTTTTTAGTGGTATAACAGACATTTGTTTGATGTTTCAGTGGCCATGATTTCATCAAAGACGTCTTTGGTCCTCGG ACAGTAATGATTTGTGATCAGGTTTTGCTTCATATGAATCATGATAATTTCATTCTTATTAGTACATATGATTTACCTCT TATATCACTATATGTTTGATTAAATTACTAATTGATGGATCCTTGCAGTGTGAGAAGGAATACCATGTCGAGTGCTTGAA GGATCATAACAAGCAGAACCTAGAGGTGTCATATTCTTTTTTTTTCTTGATTCTTTATTTCATTGATTATAATTACATGC AATTGTTAACGGGTGTTATTTACCAGAAATTACCGGAAGGTAAATGGTTCTGTTGCTCAGATTGTGATCATATTCATAAC GTTCTGGTAAAATATGTGGCTCGTGGGGAGATGAATCTTCCAGATTCCCTCCTAAGTTTGATTGAAAAGAAGCCTGAAGA AAAAGGCATAGAAAGTGAGGCTGGTCTTGATATAAAATGGAGGGTTTTTAACGAGAATTTGGTTGATCATAATGAGACTA TGTCATTGTTTTCAAACGTTGATGATATCTTCCATGTGAGTATTTTATGGTTTCTGTTTTAGCAATTACTCTACTAATAG TCTAAAAGCATGAGGCTAAGAACTAGTTGACATTTTGTAGGCTTAGCTTTAAGTTAATTAATACACATAGCTCAAGATAT TTAATTAATCCAATGGCTTGAGTGATTTTATTCCAAGTTTGGATTTGTGTTTCATAGGAGCAGTTTGGTCCAATAGTTAA TCCTACTACAGCGGGTGATTTCATTGAGGAAATGCTTTACGGGTAAGCAGTTCTTTTATAATGTTGACTTTCTTCTTTGA CATTTATGGACACATGAATGGAATTTGCTTTTCTTTGTTGGTTTGATTTCCTATAGAAAGAAAGTCAAGGATCATGATTT TCGCGGAATGTATTGTGCAGTGCTCACTATCAAGTAAGCATGATGGTGGAGTATTTTTTGCTAAGTACATATTTTGATCG AAGAGATACAAGATTTTCATGTGTAATTTATGTTTTTTACAGCCAAATGGTGGTTTGTGCTTGTCTATTTCGTGTGTTTG GGCAAGAAGTAGCAGAGCTTCCCTTAGTGGCAACTCGTAAAGATTACCAAAGAAAGGTTATTTGATTTACTTAAGCAATG AATATATATTTCTTCATTGTAATTTTGAATTATTTGAGGAATTATTTGATGTCAAATAAGATTATGTGAATTGTTTCCAC TGAAGATGCCATGATTTTCTTTTAGGGTTACTTTCGGTCCCTGTTCTCTTGCATTGAAAGGATGTTAGGATGTTTAAAGG TGAAAAACTTTGTCCTACCAGCGACGAGGGAAGCTAAGTCGCTATGGACCACCAAATTTGGGTTCTCAAGGCTGGGTAGA GAGAAGGTGCGTACAACTTTTTCGTTTGGAGTTTCATGGGGTGTTTGGATGACCATTTTTTATAGATACGATTAATTGTG AAATTTCAAAGCTGATTTCACCTACAAAAATCACATTTTCTCATATTCTCATTCTCATCGCAGATAAACAACTACCAAAA ATACAACAACATAATGGCATTTAAGGGAACATTGTTTCTCCAGAAGCCTATTCCTCAACTACAAAAAATACAACAACATA GTAGCATTTCAAGGAACATTCTTTCTCTAGAAGCATATTCCTGTGCTGAAATGAGGGCCTAATTATGTCGAAGTGGCTTT CTATAGTTTCAAAGTTGGATTCTATAGTTTATACATTCCTACTCATTTAATCATCTCTAAGATATTCATTCTTGTTAATT GATTCTTAGCAAGAAGCTTTTTCCCCTTTTAAACTTGGTTTAGAAGACAGAAAATTTATGATGCAGCTACAAGTAAAAGG AACTTCTAGCGTTGCTACATTTTTTGAAACAAGCGCTGCGTATTTGACATATAGCATGTTTGTGCATTCTTTTTCTTATA ATTAAATATGATCCTTATATGTTTTTTGGTGATTGTAAATATTTATATTTTGTTAGGTGCCTTGCTAGAAAAAAATGTAG ATTTTAG
CDS sequence (LotjaGi3g1v0483700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAACGATACAAATCTGGAGCAATTCATGGTAAATTCCAAAGGTCTCAAGAGGGAACATGCAAATGTTGACGCCCA ATCTCATACCGGTGGGCCCCACGGTCTAAACCAACCCGATACAAACCGGAATCTGGTTCAGTTTCCGGCTAATAAGAGGT CGAAGTCGTCCGGTTCATTGCATGAGAACCAGAATGGACCACTGGAGAAGAACGAGGAGGAGGCAAAGAGCGAAGTGGTG GACATTGAAATTGTGAGCGAGAATGAAGAACCCAGAACTGGTTTTGTCTCCAAGACTGCTTCTACCTCGAAAAAGGTCCC GTCTTGGAAGCTGAAGGATCTTCTAGCCTCAGGGATTCTTGAGGGAATGACAGTGCATTATATCAAAGGAAAAAGAGCAA AGAAGCAAGAAGGCACAAGGCTTGAGGGAGTGATTAGAGGCACTGGGATTGAGTGTTCTTGTGAAATTTGTAAAGGGAAT GGGGTTGTGGGAGTCACAGTTTTTGAGAAGCATGCTGATAGTGGACATAAACGCCCAGCAGAGTATATTCATCTTGAGAA TAAGAAAACTCTCTGTGATGTCATGAATGCATGTTCAGACATTCCATTAGCCAATTTGGAGGAAGCTGTCCAAAACGTCC TTGCAGGGCTAACTATGCAGAAATCTACCTTCTGTTTTAACTGCAGAGGTTCTTTTAAAGATGATGAAGCTGTGTCGAAA CTATTATGCAATTCATGCACGACATTGAAGGACTGTCCGCCCAGCCCCACTCCAACAACTGAGAATAGCAATACATGTGT TTCACCATCAGTTGAATCCAGATCCCCAAAACCAGATGTGCGTCCAAAGGGAATGAAACAAACACCATCTCATGGAAAGA ATCTAGAACAACTAACTAAGACAAGGGATCTACAAATGCACAAGGCAGTATTTGGTGAATTGGCTGAGGGAGCTGAACTA TCCTATCGTGCTCATGGAAAGAAACTATTGGTTGGTCACAAAGTGGGAAATGGAATTCGTTGCACCTGTTGTAACACTGT GGTCAGCCCTTCTCGGTTTGAAGCACATGCTGGTTGTGCATCACGACGGAAACCCTATCTGCAGATATATACATCTAATA TGGTTTCACTCCATCAGTTGTCCATTGATCTTTTAAAAAAGCGGAGTCTTTCTACCAAGGAACATGTTGATCTCTGCAGT TTATGTTCAAATGGAGGGGATCTTATCAGTTGTGATCGTGATAAATGCACAAGAGCTTTTCACCTAAAATGTGCTCGTCT TCCTCGTATACCAAGTGGTTTGTGGTACTGCAAATATTGTGAGAATGAAACTCAGGAAAACAAAGATGTGGACCAGGGGA GAAGCTTTTTAGTCGAACATGATGAGGGCGGCCAGTGTGCATTGTGCGGTGGCCATGATTTCATCAAAGACGTCTTTGGT CCTCGGACAGTAATGATTTGTGATCAGTGTGAGAAGGAATACCATGTCGAGTGCTTGAAGGATCATAACAAGCAGAACCT AGAGAAATTACCGGAAGGTAAATGGTTCTGTTGCTCAGATTGTGATCATATTCATAACGTTCTGGTAAAATATGTGGCTC GTGGGGAGATGAATCTTCCAGATTCCCTCCTAAGTTTGATTGAAAAGAAGCCTGAAGAAAAAGGCATAGAAAGTGAGGCT GGTCTTGATATAAAATGGAGGGTTTTTAACGAGAATTTGGTTGATCATAATGAGACTATGTCATTGTTTTCAAACGTTGA TGATATCTTCCATGAGCAGTTTGGTCCAATAGTTAATCCTACTACAGCGGGTGATTTCATTGAGGAAATGCTTTACGGAA AGAAAGTCAAGGATCATGATTTTCGCGGAATGTATTGTGCAGTGCTCACTATCAACCAAATGGTGGTTTGTGCTTGTCTA TTTCGTGTGTTTGGGCAAGAAGTAGCAGAGCTTCCCTTAGTGGCAACTCGTAAAGATTACCAAAGAAAGGGTTACTTTCG GTCCCTGTTCTCTTGCATTGAAAGGATGTTAGGATGTTTAAAGGTGAAAAACTTTGTCCTACCAGCGACGAGGGAAGCTA AGTCGCTATGGACCACCAAATTTGGGTTCTCAAGGCTGGGTAGAGAGAAGATAAACAACTACCAAAAATACAACAACATA ATGGCATTTAAGGGAACATTGTTTCTCCAGAAGCCTATTCCTCAACTACAAAAAATACAACAACATAGTAGCATTTCAAG GAACATTCTTTCTCTAGAAGCATATTCCTGTGCTGAAATGAGGGCCTAA
Protein sequence (LotjaGi3g1v0483700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANDTNLEQFMVNSKGLKREHANVDAQSHTGGPHGLNQPDTNRNLVQFPANKRSKSSGSLHENQNGPLEKNEEEAKSEVV DIEIVSENEEPRTGFVSKTASTSKKVPSWKLKDLLASGILEGMTVHYIKGKRAKKQEGTRLEGVIRGTGIECSCEICKGN GVVGVTVFEKHADSGHKRPAEYIHLENKKTLCDVMNACSDIPLANLEEAVQNVLAGLTMQKSTFCFNCRGSFKDDEAVSK LLCNSCTTLKDCPPSPTPTTENSNTCVSPSVESRSPKPDVRPKGMKQTPSHGKNLEQLTKTRDLQMHKAVFGELAEGAEL SYRAHGKKLLVGHKVGNGIRCTCCNTVVSPSRFEAHAGCASRRKPYLQIYTSNMVSLHQLSIDLLKKRSLSTKEHVDLCS LCSNGGDLISCDRDKCTRAFHLKCARLPRIPSGLWYCKYCENETQENKDVDQGRSFLVEHDEGGQCALCGGHDFIKDVFG PRTVMICDQCEKEYHVECLKDHNKQNLEKLPEGKWFCCSDCDHIHNVLVKYVARGEMNLPDSLLSLIEKKPEEKGIESEA GLDIKWRVFNENLVDHNETMSLFSNVDDIFHEQFGPIVNPTTAGDFIEEMLYGKKVKDHDFRGMYCAVLTINQMVVCACL FRVFGQEVAELPLVATRKDYQRKGYFRSLFSCIERMLGCLKVKNFVLPATREAKSLWTTKFGFSRLGREKINNYQKYNNI MAFKGTLFLQKPIPQLQKIQQHSSISRNILSLEAYSCAEMRA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 77 | 77 | - | – | |
| MobiDBLite | 30 | 65 | 36 | - | – | |
| PANTHER | 54 | 738 | 685 | 1.1E-242 | – | |
| PANTHER | 54 | 738 | 685 | 1.1E-242 | – | |
| MobiDBLite | 252 | 272 | 21 | - | – | |
| MobiDBLite | 252 | 295 | 44 | - | – | |
| Pfam | 303 | 370 | 68 | 1.6E-15 | ||
| SUPERFAMILY | 373 | 442 | 70 | 4.43E-13 | ||
| Gene3D | 384 | 459 | 76 | 2.5E-14 | ||
| ProSiteProfiles | 396 | 443 | 48 | 10.291 | ||
| SMART | 398 | 441 | 44 | 5.0E-10 | ||
| ProSitePatterns | 399 | 440 | 42 | - | ||
| SUPERFAMILY | 460 | 519 | 60 | 5.76E-8 | ||
| Gene3D | 460 | 524 | 65 | 5.1E-10 | ||
| SMART | 465 | 522 | 58 | 0.0033 | ||
| Gene3D | 563 | 734 | 172 | 6.7E-11 | – | |
| ProSiteProfiles | 571 | 734 | 164 | 10.187 | ||
| SUPERFAMILY | 580 | 713 | 134 | 1.31E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | N-acetyltransferase activity | Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule. |
Expression pattern of LotjaGi3g1v0483700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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