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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0488900 |
| Transcript ID | LotjaGi3g1v0488900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; Swiss-Prot: sp|O64825|LYK4_ARATH LysM domain receptor-like kinase 4; TrEMBL-Plants: tr|D3KU02|D3KU02_LOTJA LysM type receptor kinase; Found in the gene: LotjaGi3g1v0488900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90668755..90671193) extracted from Lotus japonicus Gifu genome v1.2.
ATGTAACAACTATTTAATATAGTGAATTAAATATATACCATTGCCGGCTTCTTGTACTTTGTATACATTTTTAGTCAAAT GGTCACAATCTCTAATGTCATCTTTCTTTGGATGCTTTTGTTATAGAATCCACTCCTACCATTTCATCAATGACACATTC ATATGAAAACTTCACAAGAGATATCAAACTAATCACTTTGACTTTGCAACCTTTTTTCAATTTTCTCCTTGCAACTCATT AGCGCTTGACTCATGATGATTTCTAAAACCATGATTCATCTTTGGTTTTTTTCTTTGACGTGCTTCAATGCATGCTCAGC TCAACTGGATTATGACCAATCAAGTTGCACTTCAAATGAAAGTTTCCCAGGGTCAAGGTACACCTGCAATTCAACTCATG ATTCATGCAAAACATACTTGGTGTACAGAGCCAATGAACGTTTCAAGACCATTTCAGATATCTCAAACCTCTTCAACATG AGCTCTAGACAGGTGCTTCACATAAACAACCTCACATCATCTTCTGAGATACTTAAACAAGGTAAAGAGGTTCTTATTCC TGTTGATTGTACTTGCTCTGGAGAGTTTTATCAAGCTAGTCTCAGCTATAAAGTCCCTGAAATCACAACATTTTCAGAGA TTTCATGTGGGGTTTTTGAAGCTCTATTGAAACAACTCACTATGGCTGAGGAAAATCTTTCACAAGGTGAAAGCCCTGAA GTTGGTTCTGAGCTTCAAGTTCCTCTTAGATGTGCATGCCCTGGGAATTTCTCAAGTGGGAAGAAAGTGAAGTACCTTGT TACATACCCTGTAATTCTAGGAGATGATTTAGACCAATTGACTCAGAAATTTGGCATCTCACCTGAAGGTTTTTTGGAAC AAAATCACTTGAACTCCTTGTCCACCCTTTACCCTCAAACTGTTGTTTTAGTTCCAATTGATGATGACCCCATCAGAATA TTTGAAATTCCAGATTCTCCTTCTCCACCACCTGGTTTTCTTCCCACAAATCCAGTTAAGCTACATAAATCACTAGAATC ATCACATTTGTATATTGCAGGATCTGTCTTAGGACTTGTGTTTTTTACAACACTGCTTGCAAGTGGACTCTACATGAAGA GAGTGAAAAAAAGTGATTCTGTACACTCATTCAATACAACAAACACCTTGTGGTCATCCCCAATGAGAACCTCTCCAGCA TGGTGCCTCTCTCCAGATCTTCTTCTTGGAATAAAGTACTGTTTGGTCAATTACCACATAAAAGAGCTTGAAAAGGCCAC CAAAAGTTTCAGTGAAGAAAATAAGATTGGTGATTTTGTCTATGAAGGCTTAATCAATAATATTGAGGTGATGATCAAGA GGATGAGGTTTGAAGACACAAGCCAGGTAATTGACTTACATTCCAAAATCAATCACATAAACATTGTGAACTTGCTTGGT GTATGTTATGGTGAGGGCAATGCTTCATGGTCTTATCTAGTTTATGAGTTGCCTAAAAATGGATGCTTGAGGGAGATTAT ATCTGATCCACTCAATCCTCTAAACTGGTACAGAAGGACACAAATAGCATTTGATATTGCAACATGTCTTTACTATTTGC ATTACTGCTCTTTTCCTTCCATAGCTCACATGAATGTTAGTACTAGAAATATTTTCATCACTGCAAACTGGAGAGGAAAA TTGGCAGATGTTGGTGGTTCAACCAAAAGAAACGACAGCACAGAAATTCCCAAAGGATTAGTGGAACCAGGGAACCTTTT GAAGGGTACAGTATCTCAAAAAGTTGACATTTTTGCATTTGGGGTTGTCTTGCTTGAGTTGATCTCAGGAAAAGACAACT TTGATGGAAAAATGATTAAAGAATGCTTTGGACTTTTGTTGGGGGAAGCAAGTGAAGGGGGTTGTTTTGAAGGTTTGAGG AGTATCATGGATCCTAATCTGAAGGATTATTCTCTTCCAGAGGCTTTGTGTTTGTCTTTTTTAGCAAAGGATTGTGTGGC AGATGATCCACTGCATAGGCCAACTATGGATGATATCATGAAAGTCCTAGTCAAAATGGTTTAGCCAAGTGCAGAACAAG AAATTATATCAGGTGAATTAGATGAAATTAAGGTTGTAATTATGAAAATATCATGATGAGAAATAAGTTCCTGTGCTGGC TCCTCTCAAAACATGCAAGAGAGTCAAATTTATATCAAACATTTTCCCAATTATCAATGTCTGTTGGTTCAAATGGGAAG AAACTTAGTTCTCTTCAATCAAGATATTGGATTCAAGTCTTATAAATGAGATAAATAATGGGGGTATTTGGCTGTACTCT TACATTTTGGGGATCTTGTCAAGACTGGGTGGCTGTCTGCCTTGTTTCTTAGCTCGTCGGTTGCCTACCTTGTTTGTTCT TGTCTCTCTTGAAACTTTGTTCTCAAGTTTTCTGCTTTA
CDS sequence (LotjaGi3g1v0488900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATTTCTAAAACCATGATTCATCTTTGGTTTTTTTCTTTGACGTGCTTCAATGCATGCTCAGCTCAACTGGATTA TGACCAATCAAGTTGCACTTCAAATGAAAGTTTCCCAGGGTCAAGGTACACCTGCAATTCAACTCATGATTCATGCAAAA CATACTTGGTGTACAGAGCCAATGAACGTTTCAAGACCATTTCAGATATCTCAAACCTCTTCAACATGAGCTCTAGACAG GTGCTTCACATAAACAACCTCACATCATCTTCTGAGATACTTAAACAAGGTAAAGAGGTTCTTATTCCTGTTGATTGTAC TTGCTCTGGAGAGTTTTATCAAGCTAGTCTCAGCTATAAAGTCCCTGAAATCACAACATTTTCAGAGATTTCATGTGGGG TTTTTGAAGCTCTATTGAAACAACTCACTATGGCTGAGGAAAATCTTTCACAAGGTGAAAGCCCTGAAGTTGGTTCTGAG CTTCAAGTTCCTCTTAGATGTGCATGCCCTGGGAATTTCTCAAGTGGGAAGAAAGTGAAGTACCTTGTTACATACCCTGT AATTCTAGGAGATGATTTAGACCAATTGACTCAGAAATTTGGCATCTCACCTGAAGGTTTTTTGGAACAAAATCACTTGA ACTCCTTGTCCACCCTTTACCCTCAAACTGTTGTTTTAGTTCCAATTGATGATGACCCCATCAGAATATTTGAAATTCCA GATTCTCCTTCTCCACCACCTGGTTTTCTTCCCACAAATCCAGTTAAGCTACATAAATCACTAGAATCATCACATTTGTA TATTGCAGGATCTGTCTTAGGACTTGTGTTTTTTACAACACTGCTTGCAAGTGGACTCTACATGAAGAGAGTGAAAAAAA GTGATTCTGTACACTCATTCAATACAACAAACACCTTGTGGTCATCCCCAATGAGAACCTCTCCAGCATGGTGCCTCTCT CCAGATCTTCTTCTTGGAATAAAGTACTGTTTGGTCAATTACCACATAAAAGAGCTTGAAAAGGCCACCAAAAGTTTCAG TGAAGAAAATAAGATTGGTGATTTTGTCTATGAAGGCTTAATCAATAATATTGAGGTGATGATCAAGAGGATGAGGTTTG AAGACACAAGCCAGGTAATTGACTTACATTCCAAAATCAATCACATAAACATTGTGAACTTGCTTGGTGTATGTTATGGT GAGGGCAATGCTTCATGGTCTTATCTAGTTTATGAGTTGCCTAAAAATGGATGCTTGAGGGAGATTATATCTGATCCACT CAATCCTCTAAACTGGTACAGAAGGACACAAATAGCATTTGATATTGCAACATGTCTTTACTATTTGCATTACTGCTCTT TTCCTTCCATAGCTCACATGAATGTTAGTACTAGAAATATTTTCATCACTGCAAACTGGAGAGGAAAATTGGCAGATGTT GGTGGTTCAACCAAAAGAAACGACAGCACAGAAATTCCCAAAGGATTAGTGGAACCAGGGAACCTTTTGAAGGGTACAGT ATCTCAAAAAGTTGACATTTTTGCATTTGGGGTTGTCTTGCTTGAGTTGATCTCAGGAAAAGACAACTTTGATGGAAAAA TGATTAAAGAATGCTTTGGACTTTTGTTGGGGGAAGCAAGTGAAGGGGGTTGTTTTGAAGGTTTGAGGAGTATCATGGAT CCTAATCTGAAGGATTATTCTCTTCCAGAGGCTTTGTGTTTGTCTTTTTTAGCAAAGGATTGTGTGGCAGATGATCCACT GCATAGGCCAACTATGGATGATATCATGAAAGTCCTAGTCAAAATGGTTTAG
Protein sequence (LotjaGi3g1v0488900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMISKTMIHLWFFSLTCFNACSAQLDYDQSSCTSNESFPGSRYTCNSTHDSCKTYLVYRANERFKTISDISNLFNMSSRQ VLHINNLTSSSEILKQGKEVLIPVDCTCSGEFYQASLSYKVPEITTFSEISCGVFEALLKQLTMAEENLSQGESPEVGSE LQVPLRCACPGNFSSGKKVKYLVTYPVILGDDLDQLTQKFGISPEGFLEQNHLNSLSTLYPQTVVLVPIDDDPIRIFEIP DSPSPPPGFLPTNPVKLHKSLESSHLYIAGSVLGLVFFTTLLASGLYMKRVKKSDSVHSFNTTNTLWSSPMRTSPAWCLS PDLLLGIKYCLVNYHIKELEKATKSFSEENKIGDFVYEGLINNIEVMIKRMRFEDTSQVIDLHSKINHINIVNLLGVCYG EGNASWSYLVYELPKNGCLREIISDPLNPLNWYRRTQIAFDIATCLYYLHYCSFPSIAHMNVSTRNIFITANWRGKLADV GGSTKRNDSTEIPKGLVEPGNLLKGTVSQKVDIFAFGVVLLELISGKDNFDGKMIKECFGLLLGEASEGGCFEGLRSIMD PNLKDYSLPEALCLSFLAKDCVADDPLHRPTMDDIMKVLVKMV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 8 | 18 | 11 | - | – | |
| PANTHER | 9 | 603 | 595 | 8.0E-267 | – | |
| PANTHER | 9 | 603 | 595 | 8.0E-267 | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 265 | 242 | - | – | |
| ProSiteProfiles | 53 | 102 | 50 | 7.373 | ||
| ProSiteProfiles | 183 | 227 | 45 | 9.77 | ||
| TMHMM | 266 | 288 | 23 | - | – | |
| Phobius | 266 | 288 | 23 | - | – | |
| ProSiteProfiles | 276 | 603 | 328 | 17.701 | ||
| Phobius | 289 | 603 | 315 | - | – | |
| Gene3D | 323 | 413 | 91 | 8.1E-10 | – | |
| SUPERFAMILY | 329 | 599 | 271 | 7.07E-42 | ||
| Pfam | 365 | 597 | 233 | 3.9E-20 | ||
| Gene3D | 415 | 603 | 189 | 3.6E-31 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0488900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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