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LotjaGi4g1v0005000.1

Overview

Field Value
Gene ID LotjaGi4g1v0005000
Transcript ID LotjaGi4g1v0005000.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description C2 and GRAM domain-containing protein; TAIR: AT1G03370.1 C2 calcium/lipid-binding and GRAM domain containing protein; Swiss-Prot: sp|Q9ZVT9|C2GR1_ARATH C2 and GRAM domain-containing protein At1g03370; TrEMBL-Plants: tr|I1KNM4|I1KNM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0005000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:829474..836291) extracted from Lotus japonicus Gifu genome v1.2.

CAAAGATATGAGGCAACATAGTAGATTGATAATTGCAACGTGAAATAGTCCTATGTCAACGGTGGCCACCACCACCACCT GGTCCTTCTACTTCTACAAAATGGAAAAGAAAAGAAAATCACACACAACACAAAACACCTGAGAGAGACGCACACAGTTA TTTCCTCTCTTTCCATTTTCCATTCATTAATTTTTAATTTCCAAACCACAATTAATTTGGGTCTTTTTAGGGTTTGTTTA TTCATCCTTAATAATACAATTTTATGCAGTTTTCTTATAATGAATGATGAATTCATAACAAAAACTATGTAAATCTATTT GTTTTTGGGTTTTATGCATTCAATTTTCCCCATTTCATGTTCCTGGGTTGTTCCGTGATTAGAAAAGTGACATATTTTTT GCCTAAGATTTTGGTTATACAATGAAGCTCATGGTTCGTGTGATTGAAGCAAATAACTTGGCAGCCATGGATTCCAATGG GGTAAGTCATTTCTACGTGCGGGTACAGTTGGGAAAGCACAAGTTCAGGACCAAAGTGATTAAGAACGATTTGAAACCAA AGTGGGATGAACAGTTTAGTTTTTGGGTTGATGACCTCAAAGATTCACTTGTTATCTCTGTCATGGATGAAGATAAGTTC TTCAATAATGACTTGGTGGGGCGCCTTAAAATTCCAGTCTCACAAGTTTTCGAGGAGGATATTAAATCTCTTGGCAATGC TTGGTATTCTCTCAAATCCAAAAAAAAGAAGTCCAAGATCAAGGAATGTGGTATATTCTACATTTCTACTCTGCTCAACT AAACTATCCTCAGTCTTATCTAATACTTTATTTCATTTCTTCCACATTGTCTTGTTCTTTTTAGTAGAATTAGTCTGCAT TCAAACAGGCTAGCTAGTTTGCTTATTTCTTTATTTTATGGTGTGAAATTAACCCTATTTATGACTGATTATGTCCAATT TGAGACTTTGGAGTTTACATCTTAAAGGGCCATTTGCATCAAGTCCTTTTGGAAAATAATATGCTGACTAACTATGAATG TTCTGCTTGTATGGATCATGCCGTTGAACTTAAATTGTGATATTTCTTTTTTGTTCTTCTGGATAGGTGAGATTTATCTG AGTATATCCCTTTGCCAAAATAATACATCTCCAGAGTCAAATGGTATTGGTGATCAGATGCTCCACCCAAGAAAATGTGT TGATGCAACTCCTGATTTTTCTACGAAATCTTCCTTTGGCCGTTCAAACTCATCTTCTCCTGCAAGGGAAGAAATAACAT CTACTAAGGATGAAAAATCGTGTTCACAAAAATCACTTGCTGGTAGACTTGCTCAAATATTTAATAAAAGTTCTGATATG TCTTCAATTTCACCCAGTACAAGCATGGATTTAGACTTATCAGACACAGATAAAACTGAAGTTTGCGAGCCAAAGACTGA GGATCCATCCTCTAATGACACTTTTGAAGAACTTGTCAGAAAAGTGCAGTCTGCAGATCAAGGAAGTGAAATTCCTAGCA ACTTATCTGGAGGGGTGCTTATAGATCAATTATACATTATTGCACCAGAAGAATTGAATGTATTATTGTTTTCACCCGAT TCTAATTTTCCCAAGTCATTGGCAGATGTACAGGGTACCACAGAACTGCAAATAGGTCTTTGGAAGTTAGAGAATGACGG AGAAAGCTTGAAAAGATCCCTTACTTACATCAAAGCTGCCAGTAAATTAATCAAGGCAGTAAAAGGCTATGAGGAACAAA CTTATTTGAAAATTGATGGGAAGAACTTTGCAGTTCTGGCAAGTGTCAGCACTCCGGATGTTATGTATGGAAGCACGTTT AGGGCAGAATTACTTTATGTGATCACACCAGGACCAGAGTTGCCATCTGGAGAACAGTGTTCGCGTCTCGTGATATCATG GCGAATGAATTTTTTGCAAAGCACCATGATGAAAGGGGTGATAGAAAATGGAGCTCGGCAAGGTATGAAGGAAAGCTTTG TTCAGTATGCCATTTTGTTATGCCAAACTGTTAAGCCTGTTGACTCCAAGGACCTTGGTTCCGGCAAGGAACAAGCTTTG GCATCATTACAGGCAGAGCCCCAGACAGATTGGAAGATAGCACTGCAATATTTTGCTAACTTCACATTTGTCTCAACTTT CTTAATGGGGTTGTACCTTCTTGTCCATATTTGGTTGGCTACACCTGACACAATTCAAGGGCTTGAGTTTATTGGGCTTG ACTTGCCCGATTCAATTGGTGAATTTGTTGTTTCTGCTATCTTGGTACTTCAAGGTGAACGAATGCTGGGTTTAATCTCA CGTTTCATGAAGGCTAGAGCACGAAAAGGTAATCCTGTAGTTGCCTTTATTTTCTACAATAATCTTTTCATGTGAGAATT TGATTGAATTTAAAATCTCATTCGACTAGATAAGTACTAGAGCAAATGAAAATTTTGTATTTTCTATTACTCAAAGAATA ATACGCCAAGACAGAAAAAGAAGTACAAAGGTGGAAACAATAAATCCTTTTGAGAAAAATAGAATAAAAGGGAAGTCAAC CAGCAACAAAGAGAAAAACATGTACTAAAGCGCGTAAGGAAACTTATATCATAAAAGATGATAAACCAATAAGTCACTGT ATAAGTTACTATGTTTGCACTCCATCCAAATACATGATTGATGCATACAAATTTGAATTCCGTATAGCATTATAATGCTA ATTAGCAAATAGCTCTCTTAACAAGAAGAGGTATACCCAGTGCTAGTAGACATGATAAGAAGAAGTTCATGTCTTATTCA GATATTATCCTCTGAATTTTATTTAGTTAAGAGAGATTGTTTTACAATATTTTACAGTTGCACAAATAATAAAAATTAAT GTTACAAATACAACAGCTCATTTATATGTCAAACCCTTAATATCTTTTTGGGATAAATTATATCTGGAACATCCTCCTTT TCATCAAAATTAGTAAAAGGTTCATGCCAAAATTTCCAGGCTATACCTTAAAATGGACTAGTCTTGAACTCTATAAATAC ATCACACAAACATTAGGTAATAAAACTTAACGCAGTTTCATGCTTGGAAAAAAATGTTAATTCTACTGATCATAATAGAC CTAATTGTAAAGGTTTCCAAGGACTATTACCTTCCCAAAAGAACTTCCATCACGATATACATTTGCAAGTATAGTAACAT TGTACATGGGTGAATGGAATTACCTTTTGTGATTGTAAGATCCTTTTGTATGCATGGCGGAAGTAATATGAGCCTAATAA ATGGCAAGGTAGTCTGGGTGAAAATTTCACCCAATTACTTGTTTGAAATAATAGATTTGGCTTTCTTATATCTCCAGAAT TGTTATTGCTTTTTACTGGGTTGACAATGAATTTGTTTCTCCCTCGGTGTTATTATTTACCCCTTATTTCTTTTATTGGT ACCTATGTGTTTCCTTATATGGTCTTTTTTATGGGGGTACTTCAATATTAGGTAGTGACCATGGAATTAAAGCACAAGGA GATGGATGGTTGCTAACTGTGGCCTTAATTGAAGGAAGCAATTTAGCTGCTGTTCATTCTAGTGGGTTTTGTGATCCTTA TGTGGTGTTTACTTGCAATGGGAAAACAAGAACAAGCTCGATCAAGTTCAAGAAATCTGATCCTTTGTGGAATGGTGAAT ATCATATCATGGATCATTTGGTCATTCTTATATTATAACTCAAATTTGAAACCCTGAAAGGCTGAAACAACAGCAGTATA TCAAATCAGTCTAGTTTTTTTCCTATATGTGGTTTAGACTTTTGTAAGATAAAGTATTATTTATTAAGAAAATTGTCTAT CTGTGCAGAAATATTTGAATTTGATGCGATGGATGACCCTCCTTCTGTACTAGATATGGAAATTTATGATTTTGATGGAC CCTTTGATGAAGTTGCATCTCTAGGACATGCTAAAATCAATTTCCTCAAAACGAACATCTCAGATCTTGCTGATATTTGG GTTTCTCTTGAAGGAAAGTTGGCTTTGGCATGTCAATCTAAGTTGCATTTAAGAATTTTCTTGAACAACACTAGGGGTGG GAATGTTGTAAAACACTATATAAGTAAAATGGAGAAAGAAGTGGGTAAAAAGGTATGAATCCATCCATGTTACCATCATT TAGTTGTAATTTCTTTTTTGTTTGTACTCTTGGATCATTACAATTTTTTGACTTACTTTCTCCTTATTTACAAACTTGTA GATTAATTTGCGGTCTCCTCAAACAAATTCAGCCTTTCAGAAACTCTTTGGGCTCCCACCTGAGGAATTCTTGATCAATG ACTTCACTTGTCATTTGAAAAGGAAAATGCCCCTGCAGGTATGGCTGGTTTGTTGCGAGCTGTTGAAAGCGGTGGTTAAT TTCTATTTTGGTTTTAACTAGTACATGTTTCTTTTGTATAATCTCATCAAGTTGTCAGTGCTTCTCTACAGGGCCGCCTA TTCGTCTCAGCAAGAATAATTGGGTTTCATGCAAATTTGTTTGGACACAAGACAAAATTCTTTTTGCTTTGGGAAGACAT TGAAGACATCCAAGTCATTCCTCCTACATTTTCATCAATGGGTAGTCCAATAATAGTCATAACTCTTAGGCATGGTAGAG GTGCGGATGCAAGGCATGGTGCAAAAACACAGGATGAACAAGGCCGACTTAAGTTCCGTCTCCAGTCCTTTGTGTCTTTC AATGTAGCACACAGGTAGACTGGACTTATTTAATGTTACCATACAAGCTTGATTTTTCTACATACTAGCCTTTTCATATG CAAAAAATGCAACTTGTATAAAAATATTCTGTTATCTGTTTTACTTATTTTTGCTTCACCCTTGTAGTTTAGGGTATATA ACAACACCAAAATATGTTCATTTTGGTTGCTGTTTTTTCTTATGTGTTTTCAGTATAGTCCTTGAGCTCATTTTGTTTCA TGTCGGCCAAAGTTTGGTTTGACAATTGTTTGTGAAGTTTGAGAATTGCGAATTATGAATGCTTTCATACATGAAATCTA TGATAATGTTTTCTTCCAACTTTATTTGATTATCATTTTCTGAGATAAAAATCGTTTAGCTACCAAAACTCTCCAGCTAG ATTTTTATGTGAAATTTTGAATTCACCCAAGTAAATTCCATTGCTTTGGAAGCATATCTTGGTTATCAAACTGCTCATAA TGATGCTTTTAAAGAATTATCTATGAAATTAGTACTGATACACTATATTGTAAAATATCATATCTCTCTAAGCTGAAAAC TATTCGAGTGCCGATATAGGACTATCATGGCTCTCTGGAAGGCCAGATCCTTGAGTCCTGAACAGAAGGTCCAATTAGTT GAAGACGACTGTGAAACAAAGAGCACTAACAGTGAAGAGAGTGGGTCATTCATTGGCCTTGATGAAGTTAGCATGTCTGA GGTTCATTCTTGTGCTCTTTCGGTTCCTGTAATCTCTCTCTCTCTCTCTCTCATGCAAAATATTGGTTCCATATTTGATT TCTTTAATATCTTGGCCAATATTTGTGTTTGATTATAGTTGTTTTCCTTTATCAATTTAGGTCAGTTTCTTTATAGAGCT ATTCAATGGGGGTGAGTTGGACCGTGGGGTCATGGAAAAATCTGGTTGTGTTAATTATTCTTACACCCCTTGGGTATCTG AGTATAGTGATGTCTATGAGAGGGCGATATATTACAAGTTTGAGAAGCGTATTTCACATTATAGAGTTGAAGTAACTAGT ACTCAACAAAAATCTATTTTGGATGAAAAGAGTTGGCTATTGGAAGAGGTCATGAACTTCCATGGAGTCCCTCTTGGAGA TTATTTCAATGTAAGCCAAATTTAACTTGCTCCTTAACTTTCTGTGACCATATGTTAATATCTTTATTTTCGAGGATTTT CTTATTTTAATCATAATCTTTTTGTTTGTTTTCATGTTATGTACCAATGACTAAGGTTTTATAATAACATTCCACAGCTG CACCTTCGCTATCAAATCGATGATTCACCCGGGGAAGCACAGGGATGTAAAGTAAAAGTATTTTTTGGAATTGAATGGCT GAAAAGTACAAAACATCAGAAAAGGATTACAAAGAACATCCTGAAAAATCTACAGGAACGTTTAAAGTTGACCTTCAGTC TAGTAGAGAAGGAGTTTTTGGCAAAATAGTGAATGAGTTATGCTGAATTTGACCTTGCACAACCAGTCTATAATGAAGAT GAAAGTTGCTCAGGTATAACGATGGTGATTTGCAACCAAAACTGTCCTTCAAACCATAGTATTGACTTGTAGCATCTTTG GATTTACCTCTAGTTCTCTTTCAGCAGAATCAATAATGTAACCCAGAAGCTGCCCACAGAAGCTTCTTCCCAGAATGTAT TTTGGCTTCAAAATCAATTGTAGAAGGATTTTTCAGCATGCGATCACTTGGAGATATTACTAACTTTGTAAATTACTAGT CGGTACCTAGCAGAAGATACTCAGATTGTATGAGCAGTTACAAGCAATCCAGCTTCTGGTTTTGTTATCTCCTGTCACCA TTTAGATGATAAGTTCTCTGGTTAACAATGGTCCAGTATCTTGTATCATAGCTAGTTTTGTCTTTTGCTTTCAAAAGTAT AGATACTGTTAAAGAGAAGTTTTGATCAATGTGCTTGTTGTAAACAAATTTTTGAGCTCAAGTGCAATGGAAGTCATCAG CATATGTGTGTCTTCTTTATCACAGACCATGTTCTGATGTGTCTTATAAAAATCATAGACCATGTTCTGTTGTGCATTTT AATAGCCCTAGGTATAAA 

CDS sequence (LotjaGi4g1v0005000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGCTCATGGTTCGTGTGATTGAAGCAAATAACTTGGCAGCCATGGATTCCAATGGGGTAAGTCATTTCTACGTGCG GGTACAGTTGGGAAAGCACAAGTTCAGGACCAAAGTGATTAAGAACGATTTGAAACCAAAGTGGGATGAACAGTTTAGTT TTTGGGTTGATGACCTCAAAGATTCACTTGTTATCTCTGTCATGGATGAAGATAAGTTCTTCAATAATGACTTGGTGGGG CGCCTTAAAATTCCAGTCTCACAAGTTTTCGAGGAGGATATTAAATCTCTTGGCAATGCTTGGTATTCTCTCAAATCCAA AAAAAAGAAGTCCAAGATCAAGGAATGTGGTGAGATTTATCTGAGTATATCCCTTTGCCAAAATAATACATCTCCAGAGT CAAATGGTATTGGTGATCAGATGCTCCACCCAAGAAAATGTGTTGATGCAACTCCTGATTTTTCTACGAAATCTTCCTTT GGCCGTTCAAACTCATCTTCTCCTGCAAGGGAAGAAATAACATCTACTAAGGATGAAAAATCGTGTTCACAAAAATCACT TGCTGGTAGACTTGCTCAAATATTTAATAAAAGTTCTGATATGTCTTCAATTTCACCCAGTACAAGCATGGATTTAGACT TATCAGACACAGATAAAACTGAAGTTTGCGAGCCAAAGACTGAGGATCCATCCTCTAATGACACTTTTGAAGAACTTGTC AGAAAAGTGCAGTCTGCAGATCAAGGAAGTGAAATTCCTAGCAACTTATCTGGAGGGGTGCTTATAGATCAATTATACAT TATTGCACCAGAAGAATTGAATGTATTATTGTTTTCACCCGATTCTAATTTTCCCAAGTCATTGGCAGATGTACAGGGTA CCACAGAACTGCAAATAGGTCTTTGGAAGTTAGAGAATGACGGAGAAAGCTTGAAAAGATCCCTTACTTACATCAAAGCT GCCAGTAAATTAATCAAGGCAGTAAAAGGCTATGAGGAACAAACTTATTTGAAAATTGATGGGAAGAACTTTGCAGTTCT GGCAAGTGTCAGCACTCCGGATGTTATGTATGGAAGCACGTTTAGGGCAGAATTACTTTATGTGATCACACCAGGACCAG AGTTGCCATCTGGAGAACAGTGTTCGCGTCTCGTGATATCATGGCGAATGAATTTTTTGCAAAGCACCATGATGAAAGGG GTGATAGAAAATGGAGCTCGGCAAGGTATGAAGGAAAGCTTTGTTCAGTATGCCATTTTGTTATGCCAAACTGTTAAGCC TGTTGACTCCAAGGACCTTGGTTCCGGCAAGGAACAAGCTTTGGCATCATTACAGGCAGAGCCCCAGACAGATTGGAAGA TAGCACTGCAATATTTTGCTAACTTCACATTTGTCTCAACTTTCTTAATGGGGTTGTACCTTCTTGTCCATATTTGGTTG GCTACACCTGACACAATTCAAGGGCTTGAGTTTATTGGGCTTGACTTGCCCGATTCAATTGGTGAATTTGTTGTTTCTGC TATCTTGGTACTTCAAGGTGAACGAATGCTGGGTTTAATCTCACGTTTCATGAAGGCTAGAGCACGAAAAGGTAGTGACC ATGGAATTAAAGCACAAGGAGATGGATGGTTGCTAACTGTGGCCTTAATTGAAGGAAGCAATTTAGCTGCTGTTCATTCT AGTGGGTTTTGTGATCCTTATGTGGTGTTTACTTGCAATGGGAAAACAAGAACAAGCTCGATCAAGTTCAAGAAATCTGA TCCTTTGTGGAATGAAATATTTGAATTTGATGCGATGGATGACCCTCCTTCTGTACTAGATATGGAAATTTATGATTTTG ATGGACCCTTTGATGAAGTTGCATCTCTAGGACATGCTAAAATCAATTTCCTCAAAACGAACATCTCAGATCTTGCTGAT ATTTGGGTTTCTCTTGAAGGAAAGTTGGCTTTGGCATGTCAATCTAAGTTGCATTTAAGAATTTTCTTGAACAACACTAG GGGTGGGAATGTTGTAAAACACTATATAAGTAAAATGGAGAAAGAAGTGGGTAAAAAGATTAATTTGCGGTCTCCTCAAA CAAATTCAGCCTTTCAGAAACTCTTTGGGCTCCCACCTGAGGAATTCTTGATCAATGACTTCACTTGTCATTTGAAAAGG AAAATGCCCCTGCAGGGCCGCCTATTCGTCTCAGCAAGAATAATTGGGTTTCATGCAAATTTGTTTGGACACAAGACAAA ATTCTTTTTGCTTTGGGAAGACATTGAAGACATCCAAGTCATTCCTCCTACATTTTCATCAATGGGTAGTCCAATAATAG TCATAACTCTTAGGCATGGTAGAGGTGCGGATGCAAGGCATGGTGCAAAAACACAGGATGAACAAGGCCGACTTAAGTTC CGTCTCCAGTCCTTTGTGTCTTTCAATGTAGCACACAGGACTATCATGGCTCTCTGGAAGGCCAGATCCTTGAGTCCTGA ACAGAAGGTCCAATTAGTTGAAGACGACTGTGAAACAAAGAGCACTAACAGTGAAGAGAGTGGGTCATTCATTGGCCTTG ATGAAGTTAGCATGTCTGAGGTTCATTCTTGTGCTCTTTCGGTTCCTGTCAGTTTCTTTATAGAGCTATTCAATGGGGGT GAGTTGGACCGTGGGGTCATGGAAAAATCTGGTTGTGTTAATTATTCTTACACCCCTTGGGTATCTGAGTATAGTGATGT CTATGAGAGGGCGATATATTACAAGTTTGAGAAGCGTATTTCACATTATAGAGTTGAAGTAACTAGTACTCAACAAAAAT CTATTTTGGATGAAAAGAGTTGGCTATTGGAAGAGGTCATGAACTTCCATGGAGTCCCTCTTGGAGATTATTTCAATCTG CACCTTCGCTATCAAATCGATGATTCACCCGGGGAAGCACAGGGATGTAAAGTAAAAGTATTTTTTGGAATTGAATGGCT GAAAAGTACAAAACATCAGAAAAGGATTACAAAGAACATCCTGAAAAATCTACAGGAACGTTTAAAGTTGACCTTCAGTC TAGTAGAGAAGGAGTTTTTGGCAAAATAG 

Protein sequence (LotjaGi4g1v0005000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKLMVRVIEANNLAAMDSNGVSHFYVRVQLGKHKFRTKVIKNDLKPKWDEQFSFWVDDLKDSLVISVMDEDKFFNNDLVG RLKIPVSQVFEEDIKSLGNAWYSLKSKKKKSKIKECGEIYLSISLCQNNTSPESNGIGDQMLHPRKCVDATPDFSTKSSF GRSNSSSPAREEITSTKDEKSCSQKSLAGRLAQIFNKSSDMSSISPSTSMDLDLSDTDKTEVCEPKTEDPSSNDTFEELV RKVQSADQGSEIPSNLSGGVLIDQLYIIAPEELNVLLFSPDSNFPKSLADVQGTTELQIGLWKLENDGESLKRSLTYIKA ASKLIKAVKGYEEQTYLKIDGKNFAVLASVSTPDVMYGSTFRAELLYVITPGPELPSGEQCSRLVISWRMNFLQSTMMKG VIENGARQGMKESFVQYAILLCQTVKPVDSKDLGSGKEQALASLQAEPQTDWKIALQYFANFTFVSTFLMGLYLLVHIWL ATPDTIQGLEFIGLDLPDSIGEFVVSAILVLQGERMLGLISRFMKARARKGSDHGIKAQGDGWLLTVALIEGSNLAAVHS SGFCDPYVVFTCNGKTRTSSIKFKKSDPLWNEIFEFDAMDDPPSVLDMEIYDFDGPFDEVASLGHAKINFLKTNISDLAD IWVSLEGKLALACQSKLHLRIFLNNTRGGNVVKHYISKMEKEVGKKINLRSPQTNSAFQKLFGLPPEEFLINDFTCHLKR KMPLQGRLFVSARIIGFHANLFGHKTKFFLLWEDIEDIQVIPPTFSSMGSPIIVITLRHGRGADARHGAKTQDEQGRLKF RLQSFVSFNVAHRTIMALWKARSLSPEQKVQLVEDDCETKSTNSEESGSFIGLDEVSMSEVHSCALSVPVSFFIELFNGG ELDRGVMEKSGCVNYSYTPWVSEYSDVYERAIYYKFEKRISHYRVEVTSTQQKSILDEKSWLLEEVMNFHGVPLGDYFNL HLRYQIDDSPGEAQGCKVKVFFGIEWLKSTKHQKRITKNILKNLQERLKLTFSLVEKEFLAK 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 1021 1021 0.0
ProSiteProfiles 1 83 83 17.072
Gene3D 1 144 144 9.6E-36
PANTHER 1 1021 1021 0.0
Phobius 1 457 457 -
Pfam 2 103 102 1.2E-25
SMART 2 98 97 1.7E-18
SUPERFAMILY 2 125 124 1.32E-31
CDD 3 102 100 6.9739E-26
MobiDBLite 153 171 19 -
MobiDBLite 153 184 32 -
ProSiteProfiles 257 429 173 33.943
Pfam 261 409 149 9.8E-28
Phobius 458 480 23 -
Phobius 481 499 19 -
Phobius 500 520 21 -
Phobius 521 1022 502 -
Gene3D 528 664 137 2.6E-21
SUPERFAMILY 543 665 123 1.29E-21
Pfam 544 644 101 1.3E-12
SMART 544 642 99 1.7E-10
CDD 545 645 101 1.63499E-15
ProSiteProfiles 545 627 83 12.706
Gene3D 693 781 89 1.2E-11
SMART 696 762 67 2.4E-23
Pfam 697 804 108 3.7E-16
CDD 707 820 114 5.30118E-63
ProSiteProfiles 857 1022 166 28.514
Pfam 865 1002 138 4.7E-19
Coils 987 1007 21 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0005000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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