Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0016600 |
| Transcript ID | LotjaGi4g1v0016600.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT2G02040.1 peptide transporter 2; Swiss-Prot: sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3; TrEMBL-Plants: tr|I1K3A6|I1K3A6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0016600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2126872..2131604) extracted from Lotus japonicus Gifu genome v1.2.
GTACAATAATAGTTGTTCTGTAGGGCTATGCCCCTCCCTGTAACCAAAAAATAATAGTATTTGAACTTGAATCAATATCC TCCACTTTCTTCTTCTCCTCCAAAAACAAATGGGTTCTTCTGTGAACGAGCTTCTGTTTCTGGAAGAGCCTCTTCTTCAG GTACGTGCTCCCTCCTCCATGATGACATAACTAAACATACTCATCATACTTATATATTTTAGTTAAGTTTTGGATGAGAT AATATCAAAATATAACACTTAGTGTTAGACAATAGAGTAGTTGAGAAGTCATGTCGTGGTGAGAACCACCGTCTTGAAGC AAATTTCCGGTGTTGTAAATCCTATGAGTCGGTTTTGACCTCAAGGGTTTACACAGCTGAAAATCTAATTAACTCGTGCT CTCGAGGTAGAGCGCCTTGGAGCCTTCACAATCCTCAATTGCCTATAAGAAATACAGAGGAGGAGGGTCATGGAGCTATA GAGAAGATGACCCTTCCTGAAATCACTTTCAATTGATAACGTTAAAGATAGATAACTTCATTGATGACCAATAGCAAATG AAAGGAAATAAGCAAGATTGAAGGCCAAGAGTTGCTACTGCCAATTGCTGAAAAGTAACGTGAAACAAGCTCTTAAATGC TAAATAATTCACGTGCTTAAGTTAGGAAAAGTCAATGGTAGAAGATTAACTGAATTGCCATTATCTAACCCTTAGAACTG AAGTTTGACATGAAGCTAATGTCAATTACAATACTTGGTTAATTTTCCAGAACTCTGTTTTTAGTTTTTGCCTTTTCCTC TACTTTGAGGTATTTTCATATTTGTCTTGCACTCTTGCTTAATGTTAGAAAAGCAAAATTACTCTTTGTTTTATCAATGT TTCCAGAAAAAAAGATCAAAATGTTTCTGAGTGCTATTTTGCTGTGTCATGTGATTGTTTATCTTTTTCTGAAGGATGAA GGGGACAGTCAATACACAGGAGATGGCTCAGTTGACATTAGAGGAAGGCCTGTTCTTAAGCAGAATACTGGGAATTGGAA AGCATGCCCCTTTATTCTAGGTATGCTTTTAGTCTTTTACATTGTTCTTATGTTACTTGTGTATTAAATAACCCACTTCT TATAAATATTATATCTATGTATTTAATGCCAGGCAATGAATGTTGTGAACGTTTAGCTTTCTTCGGCATTGCAACGAATC TTGTTACCTATCTTACCACCAAATTACATCAAGAAAACGTCTCTGCTGCGAGAAATGTCAGCATCTGGCAAGGCACTTGT TATCTTACGCCTCTCATTGCAGCTGTTCTTGCAGATGGTTATTGGGGACGATACTGGACAATTGCTGTTTTCTCTATGAT TTATGTCTTAGTAATAAACTAAACTTGATCTCTTCACCTAGTCATATATTTTCCCACACACAACTCTCTTGACAGTCATT GTAGAAATTAGCTGATATCTTCTGTTATCATTTTTCTTTGTCCAGAAGGACATCAATCTTAGACATGAACAATAGGGGCA TATGATTCTTGCTTGATCCTGTTCTGGATCAGCTACACAATATGCATATAAGGTGTTTGGATTGGCAGTGCACACACAAT TTAAAGCATGTAAATCCCAAAAACTACATGTAACATCCCAATCTGACAACTTTTCCCACCATATCAACACGAGTTTTTCA GTGCTGTTTGTCCTTACTCATGTGCTCCCTAAGAAATATTTCCAGAAGGTCACCCATCTCATATTGTTCCAAAGCAAACA AGCTTAATCTTGGAGTTTCTATGAACTGAGCACAAGAAAAGAAAATGCATCTTGTTGTTATGGGTAGTACTTATCAAAAG TCCTCCTTAACTGTATAGGCTCATACCTATACTTATCTCGCGTTCTGGTGCCAACTAGGTTCAGTCATGTTTCCTTCCGC CTAGAAGCTGCTCTTTGTCTGTGCCTTCTCATTGCATCGGTGATCACTCTCTACCCTCGCTGACCTCAGGCATCACACCA TATTTTGTATTTTTTCCTGAAAGTGATTATGTTAGGGTTCTAAATATTGGGTCTGATTGACTTGTGGACCTGAGTTTAGT TTATTTGGTTTATTTTTATCTGTTAATTGGTAGTCTATCTCTATCTTTAACTCTATCTTTATTTCTTTAGTAGGGTTAGT TTATTATAAATAGGAGTGTCTCCTTAGGTAAGAGCATGATTTGTGCATTAGAGTTTGCAAAGGGATTTACCCTTGGAATG GTTTCACCCTTGGAAATAAGATTCTCCTTCATATTTGAATCAATTTGTATTGTTTTCGTTTATCATCTCTTCTCTTTTTT TTTATGCTGTTGGGTTATTTCCTAACCTAACAGATTGTGTGATTCACAAAAGCAGAACCAAACAAGCTCATAATTACATA TATGCCTTGGTTTTGATTGTCCTCGCATTTTTTCTAACAAGTGCCATGTGATATGGCTGTTTCATGCAGGGGTTGTGTGT GTTGACTCTTTCTGCATCTCTTCCAGCTTTGAAGCCAGCTGAATGTTTTGGTTCTGCCTGCCCATCAGCTACTCCAGCAC AATATGCTGTGTTATACTTTGCTCTCTATGTAATTGCACTTGGAACTGGTGGTGTAAAATCATGTGTGTCATGTTTTGGG GCAGATCAGTTTGATGATACTGATCCCAATGAAAGGATAGGGAAGGCTTCCTTTTTCAACTGGTTTTACTTTTCGATCGA CTTAGGTGCTGTGGTATCATGCAGCTTCATTGTGTGGGTTCAAGATAATGCAGGATGGGGTCTTGGATTTGGCATTCCTG CTTTTTTTATGGGAATAGCTATTGGAAGCTTATGTTTAGGCACACCTCTCTACAGGTTTCAAAAACCCTGGGGAAGCCCT GTTACAAGAGTGTCCCAGGTTGTGTTAGCATCAATCCGGAAGCGGAATCTGGTTGTCCCCGATGATAGTAGTCTCCTGTA TGAGGCGCCGAACAAGAGACTTGAAAACAAAGGGAGTCGCAAACTGATGCATATTGATGATCTGAGGTATTTGTCTTTAC ATGGAGTTTTATGTAGTAGTGTTATTAGCTTTATTAATTGTCTCAATATATGGCAAAGCATTATCTGTTGTATGTTGACA TTCTATCTCATTCTTTTTAATATGCAATTTGTTTAATACCAAATTGGGAATTGGTTGTTTATGGGAAAAATGTGATCTGA GCCCTGCTCTTATGTTGCTTCTGTAGAATTGTATATGTTAGGTTCTAACTGGCCAGTTACAAATTAGATAGACTTTTCAT TTTTGTTTAAATGAAGGTTTCTTGATAGAGCAGCTATAGTGTCTGATTCCGAGAGCAGAAGTGGTGACTATACTAATCCA TGGAGGCTTTGCACCGTGACACAGGTAGAGGAATTGAAAATCTTGATCCGCGTGTTACCAATTTGGGCTACTGGAATTGT TTTTGCTGCTGTTTATGCCCAGATGTCAACATTGTTTGTGGAACAAGGAATGATGATGGACACAAGTATTGGTTCCTTCA ACTTACCACCAGCTTCCCTCGCAACTTTTGACGTGATGAGTGTTGTTTTGTGGGTTCCTGTATATGACAGGATCCTTGTT CCTATTGCAAGGAAATTTACAAGCAAGGAAAGTGGCTTTTCAGTGTTTCAGAGAATGGGAATTGGCCATTTTATTTCTGT CCTATGCATGTCATCAGCTGCTGTCGTGGAAATTGCGCGCCTGCAACTTGCCAGAGAGCTTGACCTTGTGGATAAACCTG TTTCTGTCCCTTTTAGTGTGTTCTGGCAAATACCTCAATATTTCTTATTAGGCGCAGCAGAGGTATTCACACTCATTGGG CAGCTTGAGTTCTTCTATGACCAATCTCCAGATTCTATGCGGACTTTATGTAGCGCGCTGTCACTCATTAATTTTTCATT GGGGAATTACTTGAGCTCTTTCATTCTTACTATAGTAACTTACTTCACTACACAAGGTGGAAATCCTGGGTGGATTCCAG ATAACTTGAACAAAGGTCATCTTGATTACTTTTTCTGGCTTTTAGCTGGACTTAGCTTCTTAAATATGTTGGTGTACATA GTTTCTGCAAAAAGGTTCAAGCAGAAGAAGGCTTCTTAAGATTTTTCAAGCATTATTCTTCTTCCACTTAACTAGTTCAA CACAGGCCCTGCTCCCTCTCATGAAGCCTTTTACTCAGAGCTGAACTGGCTGCATAACACATTCATGTAAATTGTTGGTT GTTAATGTTCACTTGCTGTATATTGTAAAAATCACATTATCTACATTATCTTCAATTGATATCCGATTATTTAGTCTCCA TAGAAAGTTTGATTTTTGGTGTCTACTGTTTATGATCATTATTCATTGTAGTCGATTAATAATAACGAAAAGCAAGGAGA CTGAATTACTGGGTAATCAGCACAGCATAAGTCATCAAACATGCATATACTCTAATAATATGAGGAAGGCTCACTGAGAA CATTCAAAAGCAAACTATGAGCAGAACCTATTTGCCTCATTTGCAGTGTGTTGGGGACTATTGGATTCATTAAAATCTTA CATGCACGGTTCCAAATATGCCATTAGTAAAATTAATACAGTTTTAAACAAGTTTTTCTATAGTGTGGTAAGTTGATTTA TCTGACTATTTAATTAGCCCTTGTGCAAAACTTTGGGATCACTGATGAGAATGGAGTTAGCTCCTGGTAGTACTAGCAAG AATTGTGTAATCA
CDS sequence (LotjaGi4g1v0016600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTTCTGTGAACGAGCTTCTGTTTCTGGAAGAGCCTCTTCTTCAGGATGAAGGGGACAGTCAATACACAGGAGA TGGCTCAGTTGACATTAGAGGAAGGCCTGTTCTTAAGCAGAATACTGGGAATTGGAAAGCATGCCCCTTTATTCTAGGCA ATGAATGTTGTGAACGTTTAGCTTTCTTCGGCATTGCAACGAATCTTGTTACCTATCTTACCACCAAATTACATCAAGAA AACGTCTCTGCTGCGAGAAATGTCAGCATCTGGCAAGGCACTTGTTATCTTACGCCTCTCATTGCAGCTGTTCTTGCAGA TGGTTATTGGGGACGATACTGGACAATTGCTGTTTTCTCTATGATTTATGTCTTAGGGTTGTGTGTGTTGACTCTTTCTG CATCTCTTCCAGCTTTGAAGCCAGCTGAATGTTTTGGTTCTGCCTGCCCATCAGCTACTCCAGCACAATATGCTGTGTTA TACTTTGCTCTCTATGTAATTGCACTTGGAACTGGTGGTGTAAAATCATGTGTGTCATGTTTTGGGGCAGATCAGTTTGA TGATACTGATCCCAATGAAAGGATAGGGAAGGCTTCCTTTTTCAACTGGTTTTACTTTTCGATCGACTTAGGTGCTGTGG TATCATGCAGCTTCATTGTGTGGGTTCAAGATAATGCAGGATGGGGTCTTGGATTTGGCATTCCTGCTTTTTTTATGGGA ATAGCTATTGGAAGCTTATGTTTAGGCACACCTCTCTACAGGTTTCAAAAACCCTGGGGAAGCCCTGTTACAAGAGTGTC CCAGGTTGTGTTAGCATCAATCCGGAAGCGGAATCTGGTTGTCCCCGATGATAGTAGTCTCCTGTATGAGGCGCCGAACA AGAGACTTGAAAACAAAGGGAGTCGCAAACTGATGCATATTGATGATCTGAGGTAG
Protein sequence (LotjaGi4g1v0016600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSSVNELLFLEEPLLQDEGDSQYTGDGSVDIRGRPVLKQNTGNWKACPFILGNECCERLAFFGIATNLVTYLTTKLHQE NVSAARNVSIWQGTCYLTPLIAAVLADGYWGRYWTIAVFSMIYVLGLCVLTLSASLPALKPAECFGSACPSATPAQYAVL YFALYVIALGTGGVKSCVSCFGADQFDDTDPNERIGKASFFNWFYFSIDLGAVVSCSFIVWVQDNAGWGLGFGIPAFFMG IAIGSLCLGTPLYRFQKPWGSPVTRVSQVVLASIRKRNLVVPDDSSLLYEAPNKRLENKGSRKLMHIDDLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 87 | 87 | - | – | |
| PANTHER | 11 | 309 | 299 | 2.8E-140 | – | |
| PANTHER | 11 | 309 | 299 | 2.8E-140 | ||
| Gene3D | 16 | 310 | 295 | 2.4E-114 | – | |
| SUPERFAMILY | 41 | 255 | 215 | 9.94E-14 | ||
| CDD | 45 | 254 | 210 | 3.84824E-133 | – | |
| TMHMM | 88 | 110 | 23 | - | – | |
| Phobius | 88 | 106 | 19 | - | – | |
| ProSitePatterns | 102 | 126 | 25 | - | ||
| Phobius | 107 | 112 | 6 | - | – | |
| Phobius | 113 | 139 | 27 | - | – | |
| Pfam | 113 | 278 | 166 | 1.0E-56 | ||
| TMHMM | 115 | 137 | 23 | - | – | |
| Phobius | 140 | 158 | 19 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 159 | 182 | 24 | - | – | |
| Phobius | 183 | 202 | 20 | - | – | |
| TMHMM | 200 | 222 | 23 | - | – | |
| Phobius | 203 | 222 | 20 | - | – | |
| Phobius | 223 | 227 | 5 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 228 | 248 | 21 | - | – | |
| Phobius | 249 | 311 | 63 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0016600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…