Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0041900 |
| Transcript ID | LotjaGi4g1v0041900.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|V7BTF5|V7BTF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4944732..4947196) extracted from Lotus japonicus Gifu genome v1.2.
GGTACCTTATGTTGTTTTGTGTTCATGTGTTACACGTATAATTATAGAAAGATATATTAATTTGGTGCTTTCGGTCTCTC ACTGAATTTGCTTTGTAAAATTTGATACTTACTACAGTTCAAGGCCGGCTGGTAATGATGTCATTGGTATTGATTTGGGT ACTACCAATTCATGTGTTTCTGTTATGGAGGGCAAGGCAAGATTTTCTTATTCTTAATTTTTTTTTAATATGTTTCATTA CATTGTGTTTGTGACTTTGTGTTGACTGTTGGCTAATATTTATAACAATCTCAGAATGCCAAAGTTATTGAGAATTCTGA AGGAGCAAGGACAACGCCATCAGTTGTTGCCTTCAATCAGAAAGGAGAGCTGCTTGTAGGTACACCAGCCAAGCGTCAGG CTGTGACTAACCCAACAAATACTGTCTTTGTAACCAAGAGAATGATTGGTAGGCGATTTGATGATCCCCAAACTCAGAAG GAGATGAAGATGGTACCGTACAAAATTGTTAAGGCATCCAATGGAGATGCATGGGTTGAAGCCAACGGGAAGCAGTATTC TCCCAGCCAAATTGGTGCTTTTGTTCTCACCAAGATGAAGGAAACTGCTGAAGCGTACCTTGGAAAATCAGTTTCAAAAG CTGTGGTTACTGTACCAGCTTACTTCAATGACGCTCAGAGACAGGCTACGAAAGATGCCGGTAGAATTGCCGGTCTTGAT GTCCAGAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCGTATGGTATGAACAACAAAGAGGGTCTCATTGCAGTTTT TGATCTTGGAGGTGGAACATTTGATGTGTCCATCTTAGAAATTTCTAATGGAGTTTTTGAGGTATGAACATTAACTTTTT AATCCTTATTTCTTTACATCATTAGGAATCATGCGGGACATTGTTACTGATAAGATTTTGTTCAGGTTAAAGCAACAAAT GGTGACACTTTCTTGGGAGGAGAGGATTTTGATAATACTCTATTGGACTATCTAGTGAGCGAATTCAAAAGAAGTGACAA TATTGACCTTTCAAAGGATAAGCTTGCCTTGCAAAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTGTCGTCAA CATCTCAAACAGATATAAATCTTCCATTTATCACTGCTGATGCATCTGGTGCAAAGCATCTGAACATCACATTGACTAGA TCAAAGTTTGAAGCTTTAGTGAACAACTTGATTGAGAGGACAAGGGCACCATGTAAGAACTGCTTGAAGGATGCTAACAT ATCTCTCAAGGATGTTGATGAGGTTCTTCTTGTTGGAGGGATGACTCGTGTACCTAAAGTACAAGAGGTTGTTCTAGAGA TCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCCGTTGCTATGGGAGCAGCTATCCAGGGCGGTATCCTA CGTGGGGATGTCAAAGAACTTCTACTCCTTGACGTAACTCCACTTTCTCTGGGTATTGAGACGTTGGGTGGTATCTTTAC CAGGCTGATCAACAGGAATACAACAATCCCTACTAAAAAGAGTCAGGTAATCCTTAAATGTTGATAATTACTTTTTCTAC TTGCCAGACTCTTGAGAGGATTGAATTCAGTCTTTCAAGAGTAATGTAACATTGAAACGACACAATTATATGCTTTGTTG AACAACCCTTCCCCCAAATAAATAAATAAAAAAGGTATCTTACAAAAATTCAAGGTGTTAAAGCGGAGAGCCACTGAAAG TAACTACATCTCTCTCTGGTTTGTAGATAGTTTAGACATTTCAGATGTTGACTCTAAATTTTGATATCAATGTTTCAGGT GTTTTCTACAGCTGCTGACAACCAAACTCAGGTTGGTATCAAGGTGCTACAGGGTGAGCGAGAAATGGCTTCAGACAACA AAATGCTCGGCGAATTTGAGCTTAATGGCATTCCTCCCTCTCGAAGAGGTGTCCCTCAGATTGAAGTCACATTTGACATA GATGCCAATGGGATCGTTACTGTCTCTGCGAAAGACAAGGCCACCGGAAAAGAACAACAAGTCACCATCCGCTCAGACTC CAGACTCTCTGATGATGAGATTGAGAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGGCTC TTATTGACATCAGAAACAGTGCGGATACATCCATCTACAGCATTGAAAATAGCTTAAATGAGTACAGGGATAAGATTCCC AGTGAAGTGGCCAAAGAGATTGAAGATGCAGTTTCAGATTTGAGGAAGGCTATGGCAGGTGAGAATGCCGATGAGATTAA GTCAAAGCTTGATATTGCAAACAAAGCTGTGTCCAAAATCGGAGAGCACATGTCAGGTGGCAAAAGTAGCGGTCCCTCTG ATGAAGGTTCTAAGGGTGAGGGCGATCAGGCCCCCGAGGCTGAGTACGAAGAGGTCAAGAAGTGA
CDS sequence (LotjaGi4g1v0041900.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCATTGGTATTGATTTGGGTACTACCAATTCATGTGTTTCTGTTATGGAGGGCAAGGCAAAATGCCAAAGTTAT TGAGAATTCTGAAGGAGCAAGGACAACGCCATCAGTTGTTGCCTTCAATCAGAAAGGAGAGCTGCTTGTAGGTACACCAG CCAAGCGTCAGGCTGTGACTAACCCAACAAATACTGTCTTTGTAACCAAGAGAATGATTGGTAGGCGATTTGATGATCCC CAAACTCAGAAGGAGATGAAGATGGTACCGTACAAAATTGTTAAGGCATCCAATGGAGATGCATGGGTTGAAGCCAACGG GAAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTCACCAAGATGAAGGAAACTGCTGAAGCGTACCTTGGAAAAT CAGTTTCAAAAGCTGTGGTTACTGTACCAGCTTACTTCAATGACGCTCAGAGACAGGCTACGAAAGATGCCGGTAGAATT GCCGGTCTTGATGTCCAGAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCGTATGGTATGAACAACAAAGAGGGTCT CATTGCAGTTTTTGATCTTGGAGGTGGAACATTTGATGTGTCCATCTTAGAAATTTCTAATGGAGTTTTTGAGGTTAAAG CAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGATAATACTCTATTGGACTATCTAGTGAGCGAATTCAAAAGA AGTGACAATATTGACCTTTCAAAGGATAAGCTTGCCTTGCAAAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACT GTCGTCAACATCTCAAACAGATATAAATCTTCCATTTATCACTGCTGATGCATCTGGTGCAAAGCATCTGAACATCACAT TGACTAGATCAAAGTTTGAAGCTTTAGTGAACAACTTGATTGAGAGGACAAGGGCACCATGTAAGAACTGCTTGAAGGAT GCTAACATATCTCTCAAGGATGTTGATGAGGTTCTTCTTGTTGGAGGGATGACTCGTGTACCTAAAGTACAAGAGGTTGT TCTAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCCGTTGCTATGGGAGCAGCTATCCAGGGCG GTATCCTACGTGGGGATGTCAAAGAACTTCTACTCCTTGACGTAACTCCACTTTCTCTGGGTATTGAGACGTTGGGTGGT ATCTTTACCAGGCTGATCAACAGGAATACAACAATCCCTACTAAAAAGAGTCAGGTGTTTTCTACAGCTGCTGACAACCA AACTCAGGTTGGTATCAAGGTGCTACAGGGTGAGCGAGAAATGGCTTCAGACAACAAAATGCTCGGCGAATTTGAGCTTA ATGGCATTCCTCCCTCTCGAAGAGGTGTCCCTCAGATTGAAGTCACATTTGACATAGATGCCAATGGGATCGTTACTGTC TCTGCGAAAGACAAGGCCACCGGAAAAGAACAACAAGTCACCATCCGCTCAGACTCCAGACTCTCTGATGATGAGATTGA GAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGGCTCTTATTGACATCAGAAACAGTGCGG ATACATCCATCTACAGCATTGAAAATAGCTTAAATGAGTACAGGGATAAGATTCCCAGTGAAGTGGCCAAAGAGATTGAA GATGCAGTTTCAGATTTGAGGAAGGCTATGGCAGGTGAGAATGCCGATGAGATTAAGTCAAAGCTTGATATTGCAAACAA AGCTGTGTCCAAAATCGGAGAGCACATGTCAGGTGGCAAAAGTAGCGGTCCCTCTGATGAAGGTTCTAAGGGTGAGGGCG ATCAGGCCCCCGAGGCTGAGTACGAAGAGGTCAAGAAGTGA
Protein sequence (LotjaGi4g1v0041900.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSLVLIWVLPIHVFLLWRARQNAKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFVTKRMIGRRFDDP QTQKEMKMVPYKIVKASNGDAWVEANGKQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVVTVPAYFNDAQRQATKDAGRI AGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLDYLVSEFKR SDNIDLSKDKLALQRLREAAEKAKIELSSTSQTDINLPFITADASGAKHLNITLTRSKFEALVNNLIERTRAPCKNCLKD ANISLKDVDEVLLVGGMTRVPKVQEVVLEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGG IFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFELNGIPPSRRGVPQIEVTFDIDANGIVTV SAKDKATGKEQQVTIRSDSRLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIENSLNEYRDKIPSEVAKEIE DAVSDLRKAMAGENADEIKSKLDIANKAVSKIGEHMSGGKSSGPSDEGSKGEGDQAPEAEYEEVKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Hamap | 1 | 624 | 624 | 34.077 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 17 | 14 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| SUPERFAMILY | 20 | 184 | 165 | 1.52E-53 | ||
| Gene3D | 21 | 372 | 352 | 1.4E-149 | – | |
| Pfam | 22 | 596 | 575 | 1.7E-259 | ||
| PANTHER | 22 | 624 | 603 | 0.0 | ||
| PANTHER | 22 | 624 | 603 | 0.0 | – | |
| TIGRFAM | 23 | 596 | 574 | 1.2E-271 | ||
| Phobius | 23 | 626 | 604 | - | – | |
| PRINTS | 31 | 43 | 13 | 3.8E-72 | – | |
| PRINTS | 54 | 62 | 9 | 3.8E-72 | – | |
| PRINTS | 138 | 158 | 21 | 3.8E-72 | – | |
| Gene3D | 180 | 360 | 181 | 1.4E-149 | – | |
| SUPERFAMILY | 185 | 376 | 192 | 2.92E-67 | ||
| ProSitePatterns | 190 | 203 | 14 | - | ||
| PRINTS | 196 | 206 | 11 | 3.8E-72 | – | |
| Gene3D | 223 | 310 | 88 | 1.4E-149 | – | |
| Coils | 246 | 273 | 28 | - | – | |
| PRINTS | 328 | 344 | 17 | 3.8E-72 | – | |
| ProSitePatterns | 331 | 345 | 15 | - | ||
| PRINTS | 359 | 379 | 21 | 3.8E-72 | – | |
| Gene3D | 373 | 499 | 127 | 1.8E-58 | ||
| SUPERFAMILY | 378 | 534 | 157 | 4.19E-60 | ||
| PRINTS | 382 | 401 | 20 | 3.8E-72 | – | |
| PRINTS | 463 | 479 | 17 | 3.8E-72 | – | |
| Gene3D | 501 | 599 | 99 | 1.5E-28 | ||
| Coils | 556 | 576 | 21 | - | – | |
| MobiDBLite | 589 | 626 | 38 | - | – | |
| MobiDBLite | 611 | 626 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi4g1v0041900.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…