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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0090400 |
| Transcript ID | LotjaGi4g1v0090400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Anaphase promoting complex subunit 2; TAIR: AT2G04660.1 anaphase-promoting complex/cyclosome 2; Swiss-Prot: sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2; TrEMBL-Plants: tr|G7JG99|G7JG99_MEDTR Anaphase promoting complex subunit 2; Found in the gene: LotjaGi4g1v0090400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:11970615..11979740) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAAACCCATGCGCGGTTTGTTCTAACTTTTGAAACCTTACAACCAAATCCCTAATTAGATAATCTTGGAGCTTCAC ACCGGCAACAAAATCGTTCACGGCGGAGCTCAGGGACCTCATCGTGGCGGCGCCGCCCGACTCAGAGCTAGGTTTCCGCC GTTGCAGACTTCACCAGTGGAAAGCCGCATGGCACATCAGAGTTCACGCCAGTGACTGAGGAGTTGCCGCCTTCTCCCGG TCCTTCACCGCCGATCCTCGCGCCGCCTCCGCCGTGAAACAATGCTCAATTCGGAGTCATCAAGTGATATTCTGAACTCT TTGAGCCAAGACTCCGTGCACGAAATCCTCGACAGCTACAACGCCTTCTGCAACGCCACACAATCCCTCCTCGCCGGTGC CGGCGATCTCTCCGTCGGCGGCGCTGACTTCGTTTCCCACGTCCACTGCCTCTGCAAACACGGCCTCCACTCACTCGTTC GCGACCACTTTCTCCGAGTCCTTGAGGTACCCCACCCACACCCCATTGTTTATTTCCCTTAATGCAATCACAATCTTCGA ATTTTCACACACCCTTTTGGTCGCAGGAAACGTTTGAACGAAATGGGGCATCGAGTTTCTGGCGGCATTTTGAACCTTAT GCTGCTGGGTTTACCAAGAATGATGATCTCGATGATGTGAGTATTTCATGAAACCATGTTATTCTATTGTGTTTGGTGGC TTGTGCTAGTTCTAAGAGTTGATGTTTTGATGAGAAATTAGATTGATGAGGATGATATTCAGAGTGTGTTGTACAATGCT TTGGAAGAGATCTCTATGGAGAAACAGTATCAGGAGAAGTGCTTGTTGATATTAGTCCATGCTTTACAATCTTACAAGGA TCAAATGTCAGAGGAAAGCCATGATTTCGAGGCAGAAAGAAACTACCTTACATCTAAGTATCAGTGGATTGTCTCTTCTG TGCTTATGGCCACACTTCCTCGAGTTTTCCCTGGTTTGTTAGCCGTTGTTGATTTTTTATTCATGTTAAAAGAGGGGTTG CCATTTCATGTAATAAATTAATTTGGTCGCGTTCATTATCAAATCTTGTTAAAAAATACTTTGGTCTTTACCATATGCCT CGTTTCATTTACGCACAATACATATGGTCTTCACCATATACCTCATTTCATTTCATTAAAGAATCTTGTTGAAAAATAAC TTGGTCTTCACTATATGCCTCATCAAAGTTTGCTGCCATTACATTAGCTCTATTACGTGTCATACAGGTTGGTTCTCAGT ATGATACTTTCTTTGATCTTGGTAGAAAATTGTGGTTGCTTGAAAGTTACGCTTATTGGAAATATAGTTATTTTCATGTT AATATTCTTCTTTGGTTTTCGTATGAGCTTACCATTTTGTTCCTTTTTTTTCCGGTTTCTCTTCCCCTCGTTTGCTACCA TTAGTTATACTGCATTGGTATTTTAAAAGAAGACTGGAGGAGTTAAGTACGATCATGGATGTTGAGTTCGATGATAACAC ATCTCAAAATAAGGATGGCATGGATTTAGATGAAAAAGGAAAAACATGCAACAAGGTTGGTGACATGGATGTTGATGATG AGTGCTATAACAACCATAGGTTATCAGAAAGCAGTAGACTGGTGAAGAACATTGGAAAAGTTGTTCTTGGTCTTAGAAGT CTTGGATTTACTTCTATGGCCGAAGATGCTTATGCTTCTGCCATATTTTTACTACTGAAGGTAAGCATATTTGTCTAATT CAAAATCTGGCTTTTCCATATTTCGGTATTTCCTCAATTTCTTTTACTAATTTTGCTTTGACCTTTTTGTTGCACTTTGT ATGTATCTCCATGTGAGTTTAATCTTTGTATGACATTGTTTTTATCTTGTCTGAAATCTGAATGACAGGCAAAAGTATAC GATGTAGCTGGTGATGAGTTTAGGAGCTCTGTTTTACAATCTATTCAAAGCTGGATACAGGTCTGTAGTGCATATAACTT GTGTATCTATAATCCATCCTGTGCTCCTGAGTGCAAAGAAAGATAAATGTAATATGGGATACATATTCCATTGTGTCTTG CACAAGCCACGTTTATCCTTTACTGTTGATTCTACATTACGAATTATCAATTGTTACTCCTGAAGAACATTTTGTTCTTT TACTAGTCCTAATTGTCTGCCAAGCTTCCATTATTATTTTTTAAACTACATTGAATCATAATTTTGAATTATATTTACAA GTGTGAATTTGTCTTAGATGCTGATAAGAAAATGTTGTTTTGATTCTCACCATTCAGTCAGCAATTTATCATCTTTAGTA GTTATGATTTGATAGAGATTGATTAATCAAATAGCGCCTACCCCCCCCCCCCCCCCACACACACACACACACAAAGCATT TCCAAATACCTAATTTTGACAAAATTTATGACACCTAAAACAAGTTTCCCTCTACTAAATTTTTTTAATAGCATTTTATA TTTCCTCAATCATGTTGCATCTTATCTTAATTCTTACAAAACTATGATTTCATATGATATATTTTAATTTCTTTTACATC ATTATTTTTTATATTTCCTGGTCTAGAATCACATTTTGTATGAAAATATCAATGATCATTCAATAACTCAACTGGGTAAG GGCATCTGCAGACATGTTCCAAAGTTGTTAATATAAAGAAATTAAAATTGGATAGTCACTGTGTTCTATCTAAAATATAT TGTCTTCCATACTAGCCTGCTTAAGGAAGCAAATGTTTTCACAGTTCTTACATATGATACTTATAACTGGAATCGTTCAG GCTGTTCCTCTCCAGTTTCTGCATGCCCTTCTTGTCTATCTTGGTGACTCTGTTAGTTATGAGAGTACTTCATCCGGTCT CAAATCACCTTTAGCACCACAGCCATCTTTGTTCTGTCCTGGAATTGATACTCCCTCTGAAGGGCTTGTTAGATGGAAGT TGCGGCTGGAATATTTTGCTTATGAAACACTACAAGATTTAAGAATAGCCAAATTATTTGAGATAATTGTTGATTATCCT GAGAGGTAGTTTCTTAATTATACTTTTCTGCTTTCTTTCTGGTTTTACAATTAGAAAAGTTATTGTCCTCTTTTATGTCT TACTAAACTGAAAACATCATTGACTGAAACATTTTTTGGGGGTTGAGCTTCCTATTCTAGAAGAAGAGAATGACGATTGC TCTAGGCATTGACATTTCTCCTCATAAATGTAGTTGTCATGGGTGTCAAACTCGTGAGTTGACTCAAAACTTGTACGAGT CTACAATTCTAGGTAGGAAAATCGAGTCAAATCTCTTGTAAACTCGGTACATTCGTGGTAACTCATATGAACTTGGATAG ATTTGCTAAATTCAGAAAATTAACCCTTAAAATTGGCAAACAACAACGTTTTCAATTAGGCTTGTTTCCTATAGTATTGG TCTTGTTCTAGGATAACTCATGACCAGATTTGTGAGGCATCCCAGCCAAGCAAAGACCCTCTCCTTGCTGTCTCAGCTTG CTAAGCTCACAGCCATTTACCGACCAAGAACATTTTGGTTAGCATGCTACTGTTCGTTTAGAAACCCAACCTTTGATGCT CTGATGCGCCCACTGTGCAAGGACCCTTCCCTACACAAACATATCACTGATGGGTGCTTCCTTAATTGTCTAGTACCATC ACTGCACAGCTGACTGCATGAAACCATCTCTCCTTTTGCTCAAATTTCATTGTCTTTGCTTTCATGTGAACCTATGTCTA TCAGTCTAATAGTCTATGTATACGTCCAGTATATTGAGCCTGTCCATCAACTCTTTTTCTGCTGTTATTCTCAACTATTA CTTTAAAATTTCACTTGATGATTTGGTCATATTTATGTATGATTATAACTTGTATCATCATACTTCTATTATTGTGATGT GCTTTATTGTTAGAGTTGGAATGTTGAATATTTATCATGTTAATGCAATTCAATTATGTTTGGATGATATATTAGGTTTT GAGTTTATGTAGACTCTTGCGTTTGGCAACCTTGATAGTTGTGGATGTATGACAGAATAATGAAACTTATTGTGTTTGAA TTATTAACCTTTGTTTTCAATAAATTTTAAACACCAACAATAACCACAAGCACCATTGGACCTGTCACGACAAATTAATT CTTTGTAGATCATAACTCATTTGTTTGTGCAATGTCTTCTGGCTGTTGAATTTCCTTTCTCTGTTGATATTTGAAGCTCT CCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCGAAGCTGGTGGAGTCATTTATTTCTGCACT GCGTTATCGCTTGCTTACTGCAGGCGCATCAACCAATGATATATTGCACCAATATGTTTCAACTATTAAAGCCCTAAGGA CAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCTATAAGGGATTATTTAAGAGGAAGAAGAGATACTATA AAATGCATAGTGACCATGCTGACAGATGGGACTGGTGGAAATTCGAGTGCATCTGGAAATCCGGGAGATAGCCTTCTGGA AGAGTTGAACAGAGATGAAGAGATTCAAGAGAATGTTGGTGTTGACGATGATTTTAACACTGATGATAGGGAAGCATGGA TCAATGCCTCACGGTATATTTGTATTCTGATTGATGATATGCTGTTTTCACTCTTCTTTCTTGTGTATTTTGCCTTCCTT ATTATAAACTAATTTTTTTCCCTTTGGGTTTTCCCAAGCAGATGGCAACCTGATCCTGTGGAAGCAGATCCATTAAAGGG AAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAAT ATCGAACTATGCTTGCTGAAAAACTACTAAATAAATCTGATTATGATATTGACTCTGAGATACGTACTCTAGAACTCCTT AAGGTACTTAGTCAAATAAAAACTCTCGTTGCCTTTGTTTGACTGGGTATGCAGTTAATATTTAATTATTATTGCGTGTC TTTAATCTTGCTTTGTTTTGCAGATTCACTTTGGAGAGAGCAGTCTACAAAAATGTGAGATTATGCTCAATGATTTAATT GGCTCAAAGAGAATCAACAGTAACATTAAAGCTACCATATCTCAGCCATCTCAGACAAGTAATTTCCAAGTTCAGATATT CCATGTTTCTCATTGCCAAAGACAATTTTAACTATTATTTATTTTGAAGTCTTTGTGACGAAAGTTTGTTGATGCACTCT TAGATGTTGAGGTGGAAGAGAATGCAATATCCATGGACAAAATTTCTGCCACTATCATATCTTCAAATTTCTGGCCTCCA ATACAGGTTTGCATACGAGATTCTTGATTAAATTATAGGGTGTAATCTTGATTAAATTATAGGTATGTGCAAAATAACCG GTTCAATGAACCAAACCAAAATTAAACCAAACTGTTTTTTAAAATCTAACCGTTTTACCAAAAAGCTGATCCATCATCCA TCCCGTTTTATTGTACAGCTAACAGTCTGGTCAAATTGTTTCTTATTGTGGTTCAGTTATAATTTTTTTGTGAACCGATC CAGGAAATACATTTGATTTCATCTCCTAACTCTTTCTCCACCAGAGTTCCAGACCCTAATCCCTCATTCCATCGACTCTT ACAAGCATAGTAGTTTATCATTGGATATTATGGCATTGCTAGATCTATATTACTCATCGTCACAACCACCTAGTAAAATC TTGTTCTAAAATTTGATCTGAGTCTTCTTAAGAAGCTTAACCAATTTCAGAGTTCCTTGATATTCCTTTTCACTTTCAGT GTTAATTTCATGCAAACATGTTGAGAATTTCTTCACACTAGTAAGATATATATGCCTTGGTACTTTTATTATCTGTTATC TTCCCTTGAAATTGGGTTACTCTGCTTTTATGATCTATTGTCTTATTGAGTCATTCTCAATTTGAAGCATAAAGCCAAGC ACAGTATGATAAAAATGTCTAGCCTTTTGCTATAAATGAATATGTTGGACCAAAATATATTTTGGCAAAACTGTGTTCTA TGATTAACTTGGTAGAGAATTACAGGATGAGCCCCTTAACCTGCCTGAACCTGTGGACAAACTCCTTTCCGATTATGCAA AGAGATTTAATGAAATCAAAACACCTCGTAAGCTACAGTGGAAAAAAAGTCTTGGGACCGTCAAGGTTAGTTGTTCTATA TATTTGTGATCTCTACTTGTCTGCAAATATTTAGCAGTTTTTATAACTTGATGAGTGAAGTTTCCCCTTGCCCACCTTGT ACAGTTTTACCTGTATTTTCTCCTAATGTTATCATATCCAATGGTATAGCTGGAGCTGCAGTTGAAAGATAGGGTATTGC AATTCACAGTAGCCCCTGTTCATGCATCCATCATTGTGAAATTTCAAGATCAAACCAGGTATCCTCAGCAATCGATGCAT ACATTTAGTCTTTTTTTTAATTGTAAAGTAATGTTATTACATTTCTGCCTTCAGCTGGACCTCCAAAAACCTTGCGGCTG CTGTTGGCATACCTGTTGATGCATTGAATCGGAGAATGAGTTTCTGGATAAGCAAGGTATATCTGATAGGCCTCTTATAC AATTTTTCTTGGTATTCTTTTAGTTCTGTCGACAAATATTATTTTAGTTTGGTATTGATGTTCATATGAATCATTCATCC TTATCTTTTTATGGCTTGACTTGCTGTTCAATTGGGTAAAATTTTATGAACTGTTGATTATCATGTTTAAAACTGTGTAG GTCTTATGTAATATGTTTAGCAGTGAAGATGATACTAACAGATCCTTTTAAATACACAGGGGGTCATTGCAGAGTCGTCA GGGGGAGACTCCTCTGACCATGTATTCACCATTATGGAAAGCATGGTTGAGACAAAGAAAGGAGACAGTAGTGGCAGTAC TCAGGAACTTCTTGGAGGAGGTGATGAGGAGGAAGATAGGGCTGTGGCCACTATTGAAAATCAACTTCGTAAGGAGATGA CTATATATGAGGTACATGAGATAAAGTTGTGTATTATGTTTTAGGAGTAACTTGCTTTCATATTTTTAATCATTGATAAA AAAATATAAACTACTGGTAGGAAACCTGTTACTAAAAAGTGGTAAAGAGAAGGAACAAGAGGTGCGCCGCATTTGATCAC AGCTCAGAGAGAGAAAATAACTAACTGCATAGTGAGGGTGCATAGTATGGGCAGTGTGCGTGGAGAATCTTGGGTTGAGC GGGTATGTTGTAACAGAATGAGGACTAAAAGAAAATGGGAAGTGGAGAGTGGGCAGGCTTGAATTAGTCTGGAATTCAGA GAGTTTAGGCTGTTCTAAGTGCCTTAGACTTTGTTCTGTGCTTCCCTTTACTTTCTTCTGCACTTTGTACTGTCATCCAT CTATTCCAAACCTGAATGCACTTTTATTCATTAATATACGTTATGTCAAGAACTAATTATCCCAAAAGCTTAAGTAAAAG ACACATGAATGGTTTTATATTATAATTGGGCTTGAACCGTGGACAATGCACAGAGACTCACTTGCCATTTGCTGAAATTC AACTTCTTTTATTAGAATAATGGGGGCAATAAAGATTCGTAAAAGTTTTGAGACCAGTACATGAACCAATTATCCCAAAA GCTTGAGCTTTTGGGTCAATGACATATGAATGGTTTTATATTATACTTCTAACATGTTCCATTTTCATTCTGTTTTCACT GGTACCTATCAACTACCAACAAATGGGAATCTGTGTATTGTACATTATTTAATCTATGTGGGTAGTATATGCTCATGTTG TAGAAATTCTTAATGGTCTCCTGACAACAAAAAGGGGTTTGGGTAAAACCAATAAATGGAGGAATACCATATGAGAACAG AAATTCCACGGAGTAAATAAAGCTGTCCTTTTCTTCATCATAAGCATGTTACTCCTAGTTTTGCTAATGTGTAATACATC TTCTAACCTATGATGATAGTTGGCTGCACAGTTTTCTTGTTTATGCTTGCTGAAGTATTTAAACATAAGTGAATGTGCAA TGCATTTAAGTTATGATATCTAACATGCGTTGTTTTATGTTAGAAATTTATCATGGGGATGCTGACAAACTTTGGTAGCA TGGCATTAGATCGCATTCACAATACTCTCAAGGTAAGAATGGTTTTACACTGGTGCCCAAAATAAAATAAAAAAAGAATA GTTTTACAGCTCGTAAATGGTTGGACAGTCACTGTTATCATTATCAGTTTTATTCATTATGTGATTGCATTACAACAGAT GTTTTGCATTGCCGACCCCCCATATGACAAGTCACTGCAACAACTACAAAGCTTTTTGTCTGGTCTAGTCTCTGAGGAGA AGTTGGAACTTCGGGATGGAATGTACACTCTAAAGAAGTAGTGGGGTTAAGGATTTCAAAACAATCCTTTTGGGCATAAG TTTTGAACCAAAAGGTGCAATTTCAAAATATTTCCCAGAAACCTGAATTTCTTGAAATTGTTTCACATATTTTCTTAGTC CTTTTCACATATTTATTTCGTTGCATTGATCATGATTATCCATGTTCTCACTAGTGATTTTCATTGCATTGTTAAACAAC AGCTTGAGCTCCATGGAAACGGCTTACTCTTGGAAAGGGTTTGTTTCCAGAGTTGGCTAGTCATTGGTGTCATTTTATTT TGGCTGTGCAATAGGAATACCAATGTGAAATTTTCTTCAAATGGATGAGATAGAGAGACCCAAAATGCTTCTTGTTCCAA TTTAGAGGTGACAAACTCAAGCGGACGAAAGACATCTTTGCTCTATCTGAATACCTCTATGGCCGGTGGACTGGGACAAA ACCAAAAATCCTGAATGCTGTATTTAAAATTTCTATATGAAACTGTAATGTATTTTTATGTATTTATAGTTTCTATACTT GAAGAAAAATTAAAATCTCATTCATGACTACTGATATGAACAAAATACTAAATTTTTAATTGATGTTTTAATTTCTCAAA TAATAATTTTTATCATTTTTTTTATTAATTAAGTTCTTTTACTATTTATTTTTTAATTACATTAATTTATAAATTTTTCT TTATAT
CDS sequence (LotjaGi4g1v0090400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCAATTCGGAGTCATCAAGTGATATTCTGAACTCTTTGAGCCAAGACTCCGTGCACGAAATCCTCGACAGCTACAA CGCCTTCTGCAACGCCACACAATCCCTCCTCGCCGGTGCCGGCGATCTCTCCGTCGGCGGCGCTGACTTCGTTTCCCACG TCCACTGCCTCTGCAAACACGGCCTCCACTCACTCGTTCGCGACCACTTTCTCCGAGTCCTTGAGGAAACGTTTGAACGA AATGGGGCATCGAGTTTCTGGCGGCATTTTGAACCTTATGCTGCTGGGTTTACCAAGAATGATGATCTCGATGATATTGA TGAGGATGATATTCAGAGTGTGTTGTACAATGCTTTGGAAGAGATCTCTATGGAGAAACAGTATCAGGAGAAGTGCTTGT TGATATTAGTCCATGCTTTACAATCTTACAAGGATCAAATGTCAGAGGAAAGCCATGATTTCGAGGCAGAAAGAAACTAC CTTACATCTAAGTATCAGTGGATTGTCTCTTCTGTGCTTATGGCCACACTTCCTCGAGTTTTCCCTGTTATACTGCATTG GTATTTTAAAAGAAGACTGGAGGAGTTAAGTACGATCATGGATGTTGAGTTCGATGATAACACATCTCAAAATAAGGATG GCATGGATTTAGATGAAAAAGGAAAAACATGCAACAAGGTTGGTGACATGGATGTTGATGATGAGTGCTATAACAACCAT AGGTTATCAGAAAGCAGTAGACTGGTGAAGAACATTGGAAAAGTTGTTCTTGGTCTTAGAAGTCTTGGATTTACTTCTAT GGCCGAAGATGCTTATGCTTCTGCCATATTTTTACTACTGAAGGCAAAAGTATACGATGTAGCTGGTGATGAGTTTAGGA GCTCTGTTTTACAATCTATTCAAAGCTGGATACAGGCTGTTCCTCTCCAGTTTCTGCATGCCCTTCTTGTCTATCTTGGT GACTCTGTTAGTTATGAGAGTACTTCATCCGGTCTCAAATCACCTTTAGCACCACAGCCATCTTTGTTCTGTCCTGGAAT TGATACTCCCTCTGAAGGGCTTGTTAGATGGAAGTTGCGGCTGGAATATTTTGCTTATGAAACACTACAAGATTTAAGAA TAGCCAAATTATTTGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATAC ACTGGACAACATTCGAAGCTGGTGGAGTCATTTATTTCTGCACTGCGTTATCGCTTGCTTACTGCAGGCGCATCAACCAA TGATATATTGCACCAATATGTTTCAACTATTAAAGCCCTAAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTG GTGAACCTATAAGGGATTATTTAAGAGGAAGAAGAGATACTATAAAATGCATAGTGACCATGCTGACAGATGGGACTGGT GGAAATTCGAGTGCATCTGGAAATCCGGGAGATAGCCTTCTGGAAGAGTTGAACAGAGATGAAGAGATTCAAGAGAATGT TGGTGTTGACGATGATTTTAACACTGATGATAGGGAAGCATGGATCAATGCCTCACGATGGCAACCTGATCCTGTGGAAG CAGATCCATTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCAAAAGAT CAATTAGTTCATGAATATCGAACTATGCTTGCTGAAAAACTACTAAATAAATCTGATTATGATATTGACTCTGAGATACG TACTCTAGAACTCCTTAAGATTCACTTTGGAGAGAGCAGTCTACAAAAATGTGAGATTATGCTCAATGATTTAATTGGCT CAAAGAGAATCAACAGTAACATTAAAGCTACCATATCTCAGCCATCTCAGACAAATGTTGAGGTGGAAGAGAATGCAATA TCCATGGACAAAATTTCTGCCACTATCATATCTTCAAATTTCTGGCCTCCAATACAGGATGAGCCCCTTAACCTGCCTGA ACCTGTGGACAAACTCCTTTCCGATTATGCAAAGAGATTTAATGAAATCAAAACACCTCGTAAGCTACAGTGGAAAAAAA GTCTTGGGACCGTCAAGCTGGAGCTGCAGTTGAAAGATAGGGTATTGCAATTCACAGTAGCCCCTGTTCATGCATCCATC ATTGTGAAATTTCAAGATCAAACCAGCTGGACCTCCAAAAACCTTGCGGCTGCTGTTGGCATACCTGTTGATGCATTGAA TCGGAGAATGAGTTTCTGGATAAGCAAGGGGGTCATTGCAGAGTCGTCAGGGGGAGACTCCTCTGACCATGTATTCACCA TTATGGAAAGCATGGTTGAGACAAAGAAAGGAGACAGTAGTGGCAGTACTCAGGAACTTCTTGGAGGAGGTGATGAGGAG GAAGATAGGGCTGTGGCCACTATTGAAAATCAACTTCGTAAGGAGATGACTATATATGAGAAATTTATCATGGGGATGCT GACAAACTTTGGTAGCATGGCATTAGATCGCATTCACAATACTCTCAAGATGTTTTGCATTGCCGACCCCCCATATGACA AGTCACTGCAACAACTACAAAGCTTTTTGTCTGGTCTAGTCTCTGAGGAGAAGTTGGAACTTCGGGATGGAATGTACACT CTAAAGAAGTAG
Protein sequence (LotjaGi4g1v0090400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLNSESSSDILNSLSQDSVHEILDSYNAFCNATQSLLAGAGDLSVGGADFVSHVHCLCKHGLHSLVRDHFLRVLEETFER NGASSFWRHFEPYAAGFTKNDDLDDIDEDDIQSVLYNALEEISMEKQYQEKCLLILVHALQSYKDQMSEESHDFEAERNY LTSKYQWIVSSVLMATLPRVFPVILHWYFKRRLEELSTIMDVEFDDNTSQNKDGMDLDEKGKTCNKVGDMDVDDECYNNH RLSESSRLVKNIGKVVLGLRSLGFTSMAEDAYASAIFLLLKAKVYDVAGDEFRSSVLQSIQSWIQAVPLQFLHALLVYLG DSVSYESTSSGLKSPLAPQPSLFCPGIDTPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEY TGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTG GNSSASGNPGDSLLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKD QLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRINSNIKATISQPSQTNVEVEENAI SMDKISATIISSNFWPPIQDEPLNLPEPVDKLLSDYAKRFNEIKTPRKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASI IVKFQDQTSWTSKNLAAAVGIPVDALNRRMSFWISKGVIAESSGGDSSDHVFTIMESMVETKKGDSSGSTQELLGGGDEE EDRAVATIENQLRKEMTIYEKFIMGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYT LKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 166 | 166 | - | – | |
| PANTHER | 15 | 883 | 869 | 0.0 | – | |
| Phobius | 167 | 189 | 23 | - | – | |
| Phobius | 190 | 883 | 694 | - | – | |
| SUPERFAMILY | 526 | 777 | 252 | 5.23E-59 | ||
| Gene3D | 535 | 628 | 94 | 3.2E-7 | – | |
| Pfam | 545 | 750 | 206 | 1.9E-25 | ||
| SMART | 547 | 704 | 158 | 2.9E-7 | ||
| ProSiteProfiles | 551 | 754 | 204 | 24.134 | ||
| Gene3D | 643 | 783 | 141 | 3.8E-17 | – | |
| MobiDBLite | 782 | 801 | 20 | - | – | |
| Gene3D | 798 | 883 | 86 | 2.9E-29 | ||
| SUPERFAMILY | 812 | 882 | 71 | 7.34E-20 | ||
| SMART | 822 | 881 | 60 | 4.1E-29 | ||
| Pfam | 822 | 881 | 60 | 2.1E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Molecular function | Ubiquitin protein ligase binding | Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins. |
Expression pattern of LotjaGi4g1v0090400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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