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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036317
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.584s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0767400.1
n.a. Cullin 1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1NB34|I1NB34_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0767400 LjG1.1_chr1 134015072 134021503 +
2 domain predictions
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LotjaGi2g1v0258300.1
n.a. Cullin family protein; TAIR: AT1G69670.1 cullin 3B; Swiss-Prot: sp|Q9C9L0|CUL3B_ARATH Cullin-3B; TrEMBL-Plants: tr|A0A0L9VNM3|A0A0L9VNM3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0258300 LjG1.1_chr2 72503486 72507644 +
2 domain predictions
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LotjaGi2g1v0258300.2
n.a. Cullin, putative; TAIR: AT1G26830.1 cullin 3; Swiss-Prot: sp|Q9ZVH4|CUL3A_ARATH Cullin-3A; TrEMBL-Plants: tr|A0A0L9VNM3|A0A0L9VNM3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0258300 LjG1.1_chr2 72505144 72507171 +
2 domain predictions
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LotjaGi2g1v0304900.1
n.a. Cullin family protein; TAIR: AT1G26830.1 cullin 3; Swiss-Prot: sp|Q9ZVH4|CUL3A_ARATH Cullin-3A; TrEMBL-Plants: tr|I1KXS9|I1KXS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304900 LjG1.1_chr2 77822304 77827923 -
2 domain predictions
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LotjaGi2g1v0304900.2
n.a. Cullin, putative; TAIR: AT1G26830.1 cullin 3; Swiss-Prot: sp|Q9ZVH4|CUL3A_ARATH Cullin-3A; TrEMBL-Plants: tr|A0A1J7HV59|A0A1J7HV59_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304900 LjG1.1_chr2 77823372 77825396 -
2 domain predictions
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LotjaGi4g1v0090400.1
n.a. Anaphase promoting complex subunit 2; TAIR: AT2G04660.1 anaphase-promoting complex/cyclosome 2; Swiss-Prot: sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2; TrEMBL-Plants: tr|G7JG99|G7JG99_MEDTR Anaphase promoting complex subunit 2; Found in the gene: LotjaGi4g1v0090400 LjG1.1_chr4 11970615 11979740 +
2 domain predictions
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LotjaGi4g1v0090400.2
n.a. Anaphase promoting complex subunit 2; TAIR: AT2G04660.1 anaphase-promoting complex/cyclosome 2; Swiss-Prot: sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2; TrEMBL-Plants: tr|G7JG99|G7JG99_MEDTR Anaphase promoting complex subunit 2; Found in the gene: LotjaGi4g1v0090400 LjG1.1_chr4 11970887 11979055 +
2 domain predictions
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LotjaGi4g1v0344300.1
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1MRG8|I1MRG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0344300 LjG1.1_chr4 72419983 72427534 +
2 domain predictions
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LotjaGi4g1v0344300.2
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1MRG8|I1MRG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0344300 LjG1.1_chr4 72420018 72426572 +
2 domain predictions
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LotjaGi4g1v0344300.3
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1MRG8|I1MRG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0344300 LjG1.1_chr4 72420025 72426572 +
2 domain predictions
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LotjaGi4g1v0344300.4
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1MRG8|I1MRG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0344300 LjG1.1_chr4 72420316 72426572 +
2 domain predictions
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LotjaGi6g1v0248100.1
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1L117|I1L117_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0248100 LjG1.1_chr6 56018318 56027834 -
2 domain predictions
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LotjaGi6g1v0248100.3
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|A0A0B2STE7|A0A0B2STE7_GLYSO Cullin-1; Found in the gene: LotjaGi6g1v0248100 LjG1.1_chr6 56019684 56022342 -
2 domain predictions
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LotjaGi6g1v0248100.4
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|A0A0R0G189|A0A0R0G189_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0248100 LjG1.1_chr6 56019684 56027176 -
2 domain predictions
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LotjaGi6g1v0248100.5
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1L117|I1L117_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0248100 LjG1.1_chr6 56019684 56027176 -
2 domain predictions
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LotjaGi6g1v0248100.6
n.a. Cullin-1; TAIR: AT4G02570.1 cullin 1; Swiss-Prot: sp|Q94AH6|CUL1_ARATH Cullin-1; TrEMBL-Plants: tr|I1L117|I1L117_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0248100 LjG1.1_chr6 56019684 56027476 -
2 domain predictions
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LotjaGi6g1v0310200.1
n.a. Cullin, putative; TAIR: AT5G46210.1 cullin4; Swiss-Prot: sp|Q8LGH4|CUL4_ARATH Cullin-4; TrEMBL-Plants: tr|A0A0S3S3A0|A0A0S3S3A0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0310200 LjG1.1_chr6 62898708 62907853 +
2 domain predictions
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LotjaGi6g1v0310200.2
n.a. Cullin; TAIR: AT5G46210.1 cullin4; Swiss-Prot: sp|Q8LGH4|CUL4_ARATH Cullin-4; TrEMBL-Plants: tr|A0A151RWC9|A0A151RWC9_CAJCA Cullin-4B; Found in the gene: LotjaGi6g1v0310200 LjG1.1_chr6 62898940 62906163 +
2 domain predictions
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LotjaGi6g1v0310200.3
n.a. Cullin, putative; TAIR: AT5G46210.1 cullin4; Swiss-Prot: sp|Q8LGH4|CUL4_ARATH Cullin-4; TrEMBL-Plants: tr|V7BPK5|V7BPK5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0310200 LjG1.1_chr6 62898940 62906163 +
2 domain predictions
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LotjaGi6g1v0310200.4
n.a. Cullin, putative; TAIR: AT5G46210.1 cullin4; Swiss-Prot: sp|Q8LGH4|CUL4_ARATH Cullin-4; TrEMBL-Plants: tr|V7BPK5|V7BPK5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0310200 LjG1.1_chr6 62898940 62906163 +
2 domain predictions
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LotjaGi6g1v0310200.5
n.a. Cullin, putative; TAIR: AT5G46210.1 cullin4; Swiss-Prot: sp|Q8LGH4|CUL4_ARATH Cullin-4; TrEMBL-Plants: tr|A0A151RWC9|A0A151RWC9_CAJCA Cullin-4B; Found in the gene: LotjaGi6g1v0310200 LjG1.1_chr6 62899330 62906163 +
2 domain predictions
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LotjaGi6g1v0310200.6
n.a. Cullin, putative; TAIR: AT5G46210.1 cullin4; Swiss-Prot: sp|Q8LGH4|CUL4_ARATH Cullin-4; TrEMBL-Plants: tr|A0A151RWC9|A0A151RWC9_CAJCA Cullin-4B; Found in the gene: LotjaGi6g1v0310200 LjG1.1_chr6 62899330 62906163 +
2 domain predictions
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LotjaGi6g1v0310200.7
n.a. Cullin, putative; TAIR: AT5G46210.1 cullin4; Swiss-Prot: sp|Q8LGH4|CUL4_ARATH Cullin-4; TrEMBL-Plants: tr|A0A151RWC9|A0A151RWC9_CAJCA Cullin-4B; Found in the gene: LotjaGi6g1v0310200 LjG1.1_chr6 62899386 62906163 +
2 domain predictions
 –