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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0107700 |
| Transcript ID | LotjaGi4g1v0107700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidyl-prolyl cis-trans isomerase; TAIR: AT2G15790.1 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase; Swiss-Prot: sp|Q9C566|CYP40_ARATH Peptidyl-prolyl cis-trans isomerase CYP40; TrEMBL-Plants: tr|A0A0L9TGI2|A0A0L9TGI2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0107700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:15126480..15132594) extracted from Lotus japonicus Gifu genome v1.2.
GGAGTTGGTAACCGTAGAGTTGTCGCGGCACGAAAACAAAAAGGGTTTTTGAATTACAAAGCGGGATTAGGGTTTTACTA CTTCACTCTTCTTCTTCTGCTCCTTCTCCTTCTCCTTCTCCATCTCACAAAAATGGCGAACCCTAAGGTCTTCTTCGACA TCAGCATCGGCGGCGAACTCGAAGGCCGCATCGTCATCGAACTCTTCAACGACGTCGTTCCCAAAACCGCCGAGAATTTC CGCGCTCTCTGCACTGGCGAAAAGGGCATCGGTCCCCACACCGGCGTTCCCCTCCACTACAAGGTATCAATCACCGTTTT CCTAACTGCCATTGAAATTGAGTTCGTTAGGTGTTGTAACTGTTAACAGTATTGAGGGTTTTTTTTGTTTTTTTGGTTTG TTAAATGTAGGGTATGCGTTTCCACCGCGTGATTAAAGGCTTCATGATCCAAGGTGGGGATATCTCTGCCGGTGACGGAA CCGGCGGGGAATCGATTTACGGTTTGAAATTCGAGGATGAGGGTTTTGAGCTGAAGCATGAGAGGAAAGGGATGTTGTCC ATGGCGAATTCGGGCCCGGACACTAATGGCTCCCAGTTTTTTATCACTACCACTCGGACCCCTCACTTGGATGGGAAGCA TGTGGTGTTTGGGAAGGTTCTTAAGGGGATGGGGGTGGTTCGTTCTGTTGAGCATCTTGCTACTGGGGAGAATGACCGTC CGGTTCAGGATGTTGTTGTGGCTGATTGTGGGGTGATTCCGGAAGGGGGGGATTATGGAGTGCTTAACTTTTTTAAGGAT GGTGATAGTTATCCTGATTGGCCGGCGGATCTTGATGAGAAGCATGAGGAGCTTTCTTGGTGGATGAGTGCTGTGGATGC TATCAAAGGTTTTGGGAATGAGCAATATAAGGTGAAAGGTTTAGTTTTCATGCGAATGATTCCTTTGAGTGACTGTTTTT AGTACTGTGCTACCTTAGAGTATAATGTCTTACTATTACTTAGGAACTATGTGATTTTTGCATTATACGATAAACACAGT CTTATTTAGTGTTAGGTGAAAGGCTTAGTATACATAGGAATGATATGATTTGTATTCGTTTCAGTGATAGTTTTCACGAA TATACGGCTTTAGAGCGTAATGTTTTATTGAGAATTTGGTGGCTGTCTTTCTTCTGATCATAAGCTTTGTCGTGTCGTGA TGCATGGTTTCTGCAAACCAGAAGCAAGATTATAAGATGGCTGTCAGAAAGTACCGCAAAGCCTTGCGCTACTTGGACGA GTGTTGGGAGAAGGATGACATTGACAAAGGTCAATCTCATTGATTCGCTGCTCTTTTGCTGTCTTTTTTTATTTGTTGTC TGGGTTACTATATTGCTTCTTTAGTATCTTATCTTTTTGTTTTTTTGTTCTTGACTTAGCAGAAACGAGTGCTGCTTTGA GGAAGACCAAATCTCAAATCTTTACCAACAGTTCTGTAAGTACCTTGGCCATGTCATAATTTTATGTGAGCACAACTAGA GCATAGTTCTGCTACCAATTATTAGGATCTGAGATTTGAGACTAAAGATTATTATTTATTGTCAAGGACCAACTTTCCTA CAAGCTTCAGTTGTTTAGGTAGATTCCTAAGCGTGGTTTTATATATCTAACCTTAACATGATTTTAGTTTTAGGGTATTA TGAGGAGCTTACTTTCAATAATTAATTGTTAAGTTGAGCATCAGGCTTTCAGCATTTAGAAGCTTTAGCATGCTGAAAGA CTCAAGATTGAAAATTGGAATCAATGCCTATGTTTGTTCCCCCCCCCCCTTAAAAATAAAATAAAATATACCAGATCTTC ACATCTGCTTGGCTCATGTTTTACAGATTTGATGGTGTTCCTACTTTCCTGCCCTATAACTATTTTTCACTCAGTGGCCA TCCACCTTATGAGTGATTATTTTATTAGAGACACCCGTGTGTTCTACACAAAAGCTCACTCTCTTAGGCTCAGACTCACA GGGCAGGGAGAAGGAGATACTGGATATGATCATGATCCAGCACACACCATCATACAATTATTATCGGACATACATACCAC ATACTTATACTCTGTATTTATCTTATTTTCATCAATCAGTTCACTTAAATAAATGACTTGAGTTCTGTGGTTTTGATTTT TAGGCTTGTAAATTGAAATTAGGCGATCTACAAGGAGCTGTACTAGATGCAGACTTTGCATTGCATGAGGGAGATAATGC AAAAGCTTTGTTCCGCAAAGGCCAGGTTGACATCTTACCCTGAAGAAAGTAGGATGTTGATGAAAGTGCTTAAATTGTGT GATCACTGATCACTGATCAGTGATGTATCTTTGAACAATTTAATCTGTTATTATACTTTTGAATTTTATGCAGCGCTTTT CTATTTTATTTTTTTGTAAAGCAAGATTAGACCTATGCTAGTAGGTCTCAGGCCTGTGTTTGCTTCCTTAGTTCATATGC TTTTGTGAATTGTTTGATGCCTTTAAGATTTTTTTTTGGATGTATGGTGGGAATGGGAAGGGAAAGGGAAAGGTTAAGGG GGAAGGAAAGGTAGATGCTTACCCTAGATTAGATGCAAGTATGCAACAAATTGAAAGGAATGGGTCACTAAAAGTGCATG AGAAAGATTTTATAGGGCATATGAGTATATGACAAATCCTCATTCCCTTCTTCTTTCTTACTAAACTCTGAAACAGGGAA AATACTAAAATAAGCCTTTCCCTTCCTTCTTTTTGTCTCCTAAATCCTCCATCCAAACAGATCCTCAAAAACTAATTTCG TGAGATATATCATTCATGAATTTGCAATCTTAAAATAATTATGTATATATTTAAAGCCAGTAATTTTGTTATATATGTTT TTGTCTGCCCAATCTCAGGCATATATGGCACTCAATGACATAGATGGTGCTGTTGAAAGCTTCAAGAAAGCATTAGAGTT GGAACCAAATGATGGTAGGTGGCTATTTAAATTTTGTGAATTTTAATTTCATTCATTGCTTGTGCTCATGGATGCTTTCT AGAAACTGCTTTTCTTAAATCATTTACTTTTTTTCTTCTCTTGAGAGAGGGTGTTGTTAGGAGTGAACTTCCCCGGTTGA TGAAATTGTGAGGTTTTACTCATTTAGGACCATAGTTTTTGGCTTAAAGAATACCAGGGTTTAAGGAAGGCATCAATAAT AACTTAATAAGGCACAATGCACAACATGATAGTCTAGTGTTTGTTCTAGCTAATAAATTACTTTCTCCATTAAATTATTT CTCTTTAGTCCCTATTTCATTGTTCTTAAACCATCCCTGTTTGGGTAAATGACACAATCACTTAAATATGAAATCTTTTG AAAGGAAATTATCTCATCAGTGTGTAGGAATTAGTATTTGTTTTTAAAGAATATGATCGTCCATGGTACATTACAATATT AAGCAGAAGTGAATGAATGTATAGAGATCTGACAAATTACTGGACCATGGCACTTGAATATTAACATTTTTGCCGGTGTT GCGAAGCCAACATGTGGTATTTCTAGTAAAGTGTAACAATTCCCTTCTCTGTTTTCAGGAGGGATCAAGAAAGAGTTTGC AGCTGCGAGGAAAAAGGTCAATAATTTCAACTTTTTTATTCCTCAACCATTTCATTTGCCATTTACTTCATGTTAGAATA TAATATAAAACCATTGATGTGGCTCTTACCCAACAGCTTAAGCTTTTTGGATAAGTGGTTACTTAACATGGTATCAGAGC CTCTATGACCGAGAGGTCTAGAGTTCGATCCTTGCACCCCTCACTTTCTAATTAAAAAGTGGAATTTAATTAAGCACATG GTAGGCGGGCCGGTGCATTTATCCACGCTTCAAGCCCAAAGGGCTCTTGCGTGAGGGGGCGTGTTAAAATATAATATAAA ACCATTGATGTGGCTCTTACCCAACAGCTTAAGCTTTTTGGGATAAGTGGTTACTTAACACTTCACTTTAATAGGTTTAT TCTGATTACTGATTTTGGATACAGGTTGCTGATAGACGTGATCAAGAGAAAAAAGCTTATGCTAAGATGTTCAAATAGAG TTCCTGCTGTTATGGTGCATGTAGCAGCTGTATGATCTGAAAAGTTAGATTTTTGTGGGGGGTAGTCCATGTAAACATCA TATATAGTATATGTTCTCGAATTTATGCTCTCTAGATTGTGAAGTTTTGATAGAGATAGTCATTTCATACCTTTTCCTTC TGCCAAACTCTTTGAGCGTCAACCATTAACTGTTGATTTTTGACAAAAGAGGCATATTGAGACGTCAGAATGAGTGCTCC CAAACTATGGTATTTGGTCGAATCACTAGTTTTTCTGGCAGCAAGTAAATATCAACCGTTCAAATCAGTAAAACTCCACT TTTGTTGATTTTTAGATTTAAGTGTTATCAGTTTTATTATAATATAGAAAGTCATATCGCTGTATGTAACTTGATTTTTG CTTTATGGATTGACTAAAGAATATGCAATGTCATCCACCCATTTTCCTTATCTTCTATTCAAGCCTTCAAGGCATTTTCT CATTTTGTACAAAAAGGATGGCTTTTTCTTTTCTGTTTTGATACTAATTCTTGATCCTCTGGACTGCTGTGGCTTTCCTC CTTCAAACTTGGCCAATGATTTGGCATTGGATGTGGGTGAAGCACTTTCTATGTTAGTTGCTACTTCCTCTTCAACAATT GCCTCTTGGCGTTTACCCTTTTCTGTGCACCATTCGCCTGTTTTGTTTCTTCTGTTCGTACTCAATGATCTGTTAGAGTA AAACTTGTTCAATCTTGATGATGCTAACTCACGGGTAGCCTCAGCAGCATGCTTTTGCTCCATAGAAGCAGAAATAAGCC AATTTGCTCGTGATATTTTTTCTCCAGCTTTTCTTTTTAGGGCATGGTAGTCTTCACGTGTAAGCTGTATGGCAGCTGTG TGACTTTCTGAATGGTTGATCTCTTGAATTGCTTCGGCGGTAGATTCTTCTACAACATCTGACTCGAGAAGCACAGCTTG AAGAGTGAGCTGCAAGGTTTGAGCTGTATTCCTCCTTAAATGCAGAGTTTGCCTCAGTTTTGCCCTTGTTTGCTTTTCTT TCTTTTCCTCAAGCTTGAGCCTTTCCATTTCATTACGCGTTTGATCCAAAACATGGTTCATCTCGTCTATCATCCTTTCT GTCTTGAGTTGGTCCTCCCTTTTGGATTTGATGCTCTCGAGTATAATCTCCAGCTTCAATTCCAACTCTGCAATGTCAGT TTCTGATGTATTTGAACTTTGTTGAGCATCAGCAAGATTAGCTTTCTGCCTCTCAAGTTCATCTATGAGAGGCTTGGAGT CAAGCCAGGATTGCATTGCACTCTCCTTAGCTCTCATGAGCTCTTCCTTTGCCTCAGCTAGTTCTGCTTTTATATCCTCG TGTCCAACACTCTGGTTATCTTCCTCTTCTCGTTCTTGGTACATGACTACCTCCAATGTTTCCTGCGTTGACTTCGTGAA GCCTTGGATAGATATAATGTGGCATCAATTATCTGTTTTGTGGTTGCTAGAATCAGTTAAATATAATGTGGTTACAGTTA TCTGTTTTTTTGTGTCTGGTCGATGGGGACAATTATCTGAATGAAGTCACATTGTCATTTGAGATTTCCTAGGAAGATTG TCATCTGAAGTTGCATATTTATGAGATATCTACGAAGCATATTGTTTATACCGCTTTGCTACGTCTTGTGTGCATGTAAA TACTTGGCTATATGATATGCTGCGATTGTGAGACTCATATGCTGAAAAAACCTGGTTTGGTAATTCTAGATAATTGGGAA ACACCAAGGTTTGGATGTGTAGAGTTAGAGGCAGCCACCCAATAGATTCTCCTCCCCTTCTCCGTCCATAAGGTTAATTA GTATAACATCTGTGCGGCGCAGAATAATTAGTTGTCTTCTGAAGCATCAACAAAACAAAAAGAATAATGAGTTGTGATTA ATAGTGTAGTTATATAACCAAAAGTATATATAGGACATAACCATCAATGCAACTTATAAAACTCGAAAATATGTAGATCC AAGTAGTAAAATATGTAAAAAAATAGATGTTCAAG
CDS sequence (LotjaGi4g1v0107700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAACCCTAAGGTCTTCTTCGACATCAGCATCGGCGGCGAACTCGAAGGCCGCATCGTCATCGAACTCTTCAACGA CGTCGTTCCCAAAACCGCCGAGAATTTCCGCGCTCTCTGCACTGGCGAAAAGGGCATCGGTCCCCACACCGGCGTTCCCC TCCACTACAAGGGTATGCGTTTCCACCGCGTGATTAAAGGCTTCATGATCCAAGGTGGGGATATCTCTGCCGGTGACGGA ACCGGCGGGGAATCGATTTACGGTTTGAAATTCGAGGATGAGGGTTTTGAGCTGAAGCATGAGAGGAAAGGGATGTTGTC CATGGCGAATTCGGGCCCGGACACTAATGGCTCCCAGTTTTTTATCACTACCACTCGGACCCCTCACTTGGATGGGAAGC ATGTGGTGTTTGGGAAGGTTCTTAAGGGGATGGGGGTGGTTCGTTCTGTTGAGCATCTTGCTACTGGGGAGAATGACCGT CCGGTTCAGGATGTTGTTGTGGCTGATTGTGGGGTGATTCCGGAAGGGGGGGATTATGGAGTGCTTAACTTTTTTAAGGA TGGTGATAGTTATCCTGATTGGCCGGCGGATCTTGATGAGAAGCATGAGGAGCTTTCTTGGTGGATGAGTGCTGTGGATG CTATCAAAGGTTTTGGGAATGAGCAATATAAGAAGCAAGATTATAAGATGGCTGTCAGAAAGTACCGCAAAGCCTTGCGC TACTTGGACGAGTGTTGGGAGAAGGATGACATTGACAAAGAAACGAGTGCTGCTTTGAGGAAGACCAAATCTCAAATCTT TACCAACAGTTCTGCTTGTAAATTGAAATTAGGCGATCTACAAGGAGCTGTACTAGATGCAGACTTTGCATTGCATGAGG GAGATAATGCAAAAGCTTTGTTCCGCAAAGGCCAGGCATATATGGCACTCAATGACATAGATGGTGCTGTTGAAAGCTTC AAGAAAGCATTAGAGTTGGAACCAAATGATGGAGGGATCAAGAAAGAGTTTGCAGCTGCGAGGAAAAAGGTTGCTGATAG ACGTGATCAAGAGAAAAAAGCTTATGCTAAGATGTTCAAATAG
Protein sequence (LotjaGi4g1v0107700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANPKVFFDISIGGELEGRIVIELFNDVVPKTAENFRALCTGEKGIGPHTGVPLHYKGMRFHRVIKGFMIQGGDISAGDG TGGESIYGLKFEDEGFELKHERKGMLSMANSGPDTNGSQFFITTTRTPHLDGKHVVFGKVLKGMGVVRSVEHLATGENDR PVQDVVVADCGVIPEGGDYGVLNFFKDGDSYPDWPADLDEKHEELSWWMSAVDAIKGFGNEQYKKQDYKMAVRKYRKALR YLDECWEKDDIDKETSAALRKTKSQIFTNSSACKLKLGDLQGAVLDADFALHEGDNAKALFRKGQAYMALNDIDGAVESF KKALELEPNDGGIKKEFAAARKKVADRRDQEKKAYAKMFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 360 | 360 | 1.8E-185 | – | |
| Gene3D | 1 | 173 | 173 | 5.6E-85 | ||
| PANTHER | 1 | 360 | 360 | 1.8E-185 | – | |
| SUPERFAMILY | 2 | 173 | 172 | 3.21E-75 | ||
| CDD | 4 | 171 | 168 | 1.37074E-107 | – | |
| ProSiteProfiles | 7 | 172 | 166 | 45.782 | ||
| Pfam | 8 | 172 | 165 | 4.9E-50 | ||
| PRINTS | 24 | 39 | 16 | 1.6E-37 | ||
| PRINTS | 61 | 73 | 13 | 1.6E-37 | ||
| PRINTS | 104 | 119 | 16 | 1.6E-37 | ||
| PRINTS | 119 | 131 | 13 | 1.6E-37 | ||
| PRINTS | 132 | 147 | 16 | 1.6E-37 | ||
| SUPERFAMILY | 210 | 355 | 146 | 1.49E-24 | ||
| SMART | 212 | 245 | 34 | 0.32 | ||
| ProSiteProfiles | 212 | 245 | 34 | 7.139 | ||
| ProSiteProfiles | 212 | 245 | 34 | 7.509 | ||
| Gene3D | 212 | 360 | 149 | 1.4E-38 | ||
| ProSiteProfiles | 297 | 330 | 34 | 14.337 | ||
| ProSiteProfiles | 297 | 330 | 34 | 14.414 | ||
| SMART | 297 | 330 | 34 | 7.5E-9 | ||
| Pfam | 297 | 330 | 34 | 8.3E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein peptidyl-prolyl isomerization | The modification of a protein by cis-trans isomerization of a proline residue. | ||
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0107700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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