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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0148600 |
| Transcript ID | LotjaGi4g1v0148600.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | U2 snRNP-associated SURP motif-containing protein; TAIR: AT5G25060.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9C5J3|RRC1_ARATH Protein RRC1; TrEMBL-Plants: tr|A0A0S3R3V4|A0A0S3R3V4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0148600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:24220199..24227848) extracted from Lotus japonicus Gifu genome v1.2.
ATTAAATTAGGATGGAATTCATCATTTATATTTATTTGCAGGTATGTTCCATCTTTTATACCACCTCCACTGGCAACCAA GGGGAAGGAATCTGAAAGGAAAGTCAGTATTGCAATTGAAGTTTTGACGTCTGATTTTATTTTGTATGTTATGATGTATC CAGAGATCTAATGCTCTTGTATGGTGCATTTTAGAAAGAAGAGGAAAAACCCAAGGAGAAAGAGAAAGGAAAGCCAAGGA ACATTGATTTTTTTATGGAGGAGCTAAAGCATGAGCAAGAGATGAGGGAGAAACGAAATCAAGAACGTGAAAATTGGCGT GATGGGCGTCCGGTAGAACATTCTACTACTGTAAGTGATCCTTTTCTCTGACCAAGCAAGTTATATGTAGGATTGTAGGT GCTTGTAATTGGATTCCAGTCCCTCTATCTTTAAATGTGCAGGACTTGTTTATTTCTTTTTGTCATCTCTATCTGCTTGT TCTGCTTTCTTTTCCTTGTTTTTATTTTTGCACATCACAAATATGACTTGATATACCTCTCAATCTACATACTATATTAT GAAAATAATTATCAGTATATGCATATTCTTAGCAGTTCATTTTATTTCTGTCGTGTTAAATATATTTGAGAGTTTTATTG ATATTTCCCGCTATACCAACAGGTTAGTCGTTTTGATGAACTGCCTGATGATTTTGATCCAAGTGGAAAACTTCCAGGAT CATTTGATGATGGTGATCCACAAACTACAAATCTTTATGTTGGAAATCTCTCGCCCAAGGTTTGAGTATCTCCTTAGCTC TGGGCTTTGTTGCTCTCTGTAAATTAAGAGCATGTTTTCTCATCTTGGCAATTTTTTTATTATTTTAGGTGGATGAAAAT TTCCTTCTCCGTACTTTTGGAAGATTTGGACCTATTGCTAGTGTGAAAATCATGTGGCCTAGGACTGAGGAGGAGCGAAG GCGGCAAAGAAACTGTGGTTTTGTGGCTTTCATGAACCGAGCTGATGGACAGGCTGCTAAAGATGAAATGCAAGGTCTGA TCCTTTTATCTGAATCCAGAAGATAAACTACAGAAAATATAGCTTATTTTTATTTTTTCTGTTTAGTATATTGTTGCAGG TTTGCTTCCATAATACCATGCTAAACTGCATCTAACTTGAATTTCAAATGAATATGATTAATTTCTTTGAATGATATCTT CTATAGAAGTTATCAAAGATATGACATTATGTTTTGACCTGGCTATAATTCGGCATTGCTTCTCTCGGTTACTTTCTCTA CTTAGAATTCTAATAATTTTTGGTCGAATTTTTTTGTAAATCCATGATATGTTTGTGCAGGAGTTGTGGTTTATGAATAT GAATTAAAAATTGGGTGGGGAAAGTCTGTTGCGCTCCCGTCACAAGCATTACCTGCACCTCCACCGGGGCATATGGCCAT CAGGAGTAAGGAGGTACTACTGTTATTTTATTAAAAAGGCAGTAACATTTAAAGATTTTTTGAGGATTGTAATTACAATT TGGTTGTAATCACCCTTCAGTGGCTATTCAATTCAAAATTAATCATTCCTAGTTTCTATTTTTTCTCATTGTAATTATTC ATCTAAAATAATTCTTAAAAGAAAAAAAAATTCCCTCTCCACTGAAAAAAGGTAAGAGAAAGAAACTTACCCATGCTATC TACCAATGTACTACGTACATTTGCCCCTACATATGATATGCTGATAAAATATACGAGTTTGACTATCTTTATTTGTTTTT TAAAATGTACAAATTTCATGCAAGGTTTCCTACTATACGCATAGATCTGACCCTTCCATGGATCGCACAATGCTTCCCTT TTGCATTAAATGTAAAAAAAACGTTTGACCTGTTTTTTATTTTATTTTATTTTGCAGGGTAGTACTGTGATCTTGTCTGG CCCATCAGGTCCACCAGTAACGTCTGTGCCTAGTCAGAACTCTGAACTGGTAAATTCCTTGTTTTTAATTCTCATAATTT CTTTAAATCAATACCTTCTTGTGCTGTCATACAGTGATGAGACCAGAAATCATCATTAAAAATGTAATTATATATGACAC AAATTTGGTGCGTAGTCAACCATCATTTTGCTTTTGTTATGTTTATGGATTAGTTTTCTTTTGATATACCAGATTGTGGA ATTTTTTTTCAAAATATTTGTAATGGTATACAAATACCAGATATTATGTTACTTGAAGTTTTCTCTTACTCTCAATGTTC CTGATATAATGGTTCTTACCTCTACTATTCCTGCTGTTAATTTTTGTTAGGTTCTTACTCCTAATGTTCCTGATATAATG GTTACACCTCCTGAGGATGACCATCTAAGGCATTTAATTGATACTATGGCTTTGTATGTCCTGGATGGAGGATGTGCTTT TGAACAAGCAATTATGGAGAGGGGTCGTGGCAATCCTCTTTTTAATTTCTTATTTGTTCTTGGCTCGAAGGAACATACCT ACTATGTTTGGAGACTCTACTCATTTGCTCAGGTACATTCATTTTATTTTTGAGAAGATGCAATTTCCCTTCTTGGATTC TGCAGGAATTTATCTGCACCAAAGAACTCAAGAAAGCAAAATGCTTACATTTTGACAAAAAAAAATGGTGTAACACAGAT ATTTTCGAATCGTTGATTGAAAGTGTGTTTATTTTGCCTGGTATACAGGGTGACACTCTTCAAAGATGGCGGACTGAACC TTTTATCATGATAACGGGTAGTGGAAGGTACTGTAATGCATTGTTGGTTTTCATAAAGAATTAGAATTAAATGAAAAAGA AGTGTTTGTTATTTTCTTTATGTTGTTTCTGGATGAGTCAATTGGAGTAAGTATAAATTGGGCACTTTTTTTTTTCTAGG TGGATTCCTCCCCAATTACCACCATCGAGAAGTCCAGATCATGAAAAGGAGTCTGGTTCCACACACGCTGGAGGAAGAAG CAGGGTACTCCTTGTTGGATTTTCAATCAGGATGAATACAATTACTCAGTAGTGTTTCTCTCGATCTTCTCACTTTTCCT TGTTTTGATTGATATATGCAGCGTGTAGAGCCTGAAAGAACATTGACTGATGCACAACGGGATGAGTTTGAAGATAGGCT GCGTGCTTTAACATTAGAGAGGAGCCAAATAAAAGAGGCTATGGGGTTTGCTTTGGATAATGCTGACGCAGCTGGGGAGG TATTTTTTATACTCTGCTTATCTATTATTGGATTGCCGTCGTTATAATTCATTTTATTGGTTTACAGTCATATAATGTAT TCATCATGCTTTTCTATTTTAGCTCGTTTGGTTTGTCCATTACTCCATTCCAGTAAATCTTAGGCCTAGGCCTAACTTTC AGGTCAATGGGCTTTAACTCAAATCCAAACATTAGATTAGACAGCCTTATGACCATGCCTGGGCTTGACCTGGTCAATGT CATCCCCAAATCATCGATCTAATTACAAGACTTTGTACCACAACAAAAGATACTAAATTTATTTTGAATTTTGAACTGAT ATTTTCTCAATTTTAACACCCAGGACGACATTGGTTTGGCGTGAGAATCGTTGAACAGATATATTTCCTTACATTGTATT GTTTCCTTATGTTAGAAGTACAGTTCTTTTGCGTATGCTGAAATATCTGTATAAAGTCTCTCGATATTTTGTATAGAAAT CATCGGCACTGAGATAGAAGATTTGTCCGGTGCAGATTGAGCAAGATAAGAGATTGACTTCAGCATAGTAGTCAATCCCG GATAGCGGCCGACCCCAAAAGTGGGATAGCGGGATGACCGCTATTCTGATTTTTCATATATAATTAATAGTATTATAGTA TATACATGTAATAACTAAAAAATGATAAATACAACTTAAAATTCCTAACATGATGAAATGATAGAGAAGAGAGGAGGAGG ATGCTATGCTGGAAGAGGAGAGAACCAAAGGGTAACAAAATGAATTGATTGAGAATAGAAAAATAAAGAGGAAAAGAAAG GAAAGAAAAATAGAGGAACAGAAAGATAAAAAAAAAACAGAGCAGAACAGAGGCCCAAGGGAAACAGGGGCAGTGGTCGC CGGAGATAGGCTGAAAGTCACCGCACAGTGTTCGCCGGAAGTTGGACGGTGCTTGTCGGAGGTCGGGCGGTGGCCATGGG TGCTGATCGACGGTGGCAAAAGGAGGTCGCACAATGACCATGGGTTCTGGTCGCCGAAGAAAGAAGAAGATGAATCATGA GATGAAACGCGTGTTTCATTTATTAGAAGTTAAATTCCAAAAGCACCCTTAGAGTTTAACCTAATTATAAAATTTCAAGG GCAATTTAGGTTTTTCCGCGAGTTCCCTTTATCTTCTCCTTGTCGCGCCGCGATCTGTGATTTCTGGGATTTTGGCCGCA ACGCGATTGATTTAGAATCGCGGGGAGGGGCCGCGACGGCGCTATAGCGGCGCGATTTGCCGCGATTGACTACTATGGAC TTCAGACTGATTTTCTTTTTCTTTTTCGAGGGGCAACTAGGTTTCCTAGATGATTAAGACAAGAAATAAGGGTTACCCTC TACAGTCGTTTTCTTTCTCTACATATTTCCACCGAAAGCACAAGTACAATGCACAAGTATAGAGTGGACACATAGGCCTA GTATATACTAGTAATCTAGTATAAGCCTACAATAGAAGGCATGCATGTTATGCAAAGCTCTTGTGGATTAATCACTATCT GAATTCAGAAACAGAAGAAAGGGATTCTGACTTGTTCAGTTTTGTTTCCATGCAGTCATTTAATATGCACATTCTTGAAT TATCTTTCTTTGTGTTTCTTGAAGTATTTCCCTTATTGTATATGTAATTTTTTTACTGCAGATAGTTGAAGTTTTGACGG AATCCTTGACTCTTCGAGAAACTCCTATTCCAACGAAAATTGCAAGGCTTATGCTTGTCTCTGATATTCTTCATAATAGT AGTGCCCCTGTAAGAAATGCATCGGCATATCGGACAAAGTTTGAAGCAGCACTGCCTGACATAATGGAGAGTTTCAATGA CTTGTATCGTAGTATAATGGGACGTATTACTGCAGAAGCCCTAAAGGTATGCTGAACACTTGGACTGCCTTGGTATAACT TTATTATTCACCGTTGCTCTGTTTCTGATCTTTGTGTGAAATGTACCAGGAACGAGTCCTGAAAGTTCTGCAAGTGTGGG CCGACTGGTTTCTCTTTTCAGATGCTTATGTTAATGGCTTAAGAGCCACTTTCCTCCGACCTGGGAACTCTGGTGTGGTG CCATTCCATTCCATATGCGGTGATGCACCTGAGATTGAGCAGAAGATCACTTCTGAAGATACAGTTGTTGGTGGCAAGAT CAACCAAGATGCTGCATTGGCAATGGGTCGAGGAGCTGCAACGCAGGAGCTAATGAATCTTCCTCTTGCTGAGCTAGAAA GGCGGTGCCGACACAATGGATTATCACTAGTTGGTGGTAGAGAAATCATGGTCGCAAGGTTGTTAAGTCTTGAAGAGGCA GAAAAACAGAGGGTTTATGAACTGGATGATGAATTGAAATATCCCCACGGCCAAGCTAGTTCTGCGAAATATTCAAGTGG TCGGCGAGAAACAAGTGCAGAGCTTGAACCAGTGGGATATTCTGGATGGAACCATTATGGGGATGATGATTTGCAATCAC AAGGCAAAGAGTCTGTACCTTTAGCGCCAACTCTTCCTATTCCACAGCCTGAACTTAAAGCCTTCACAAAAAAGGAGAAG AATGACCCGGTTTTACCTGCCTCTAAATGGGCTCGGGAGGATGATGAGAGTGATGATGAGCAAAGAAGTGGAAAAAATCT CGGATTAAGCTACTCATCTTCTGGCAGTGAGAATGTGGGTGGTGGTCATATTAAAGCTGATGAATCAGAGTCTGCTGCTG ATACAAGTTTTTCAGCTCATGCTGACAGTGGACTGAATGAAGAACAGAGGTTGCTTTATAGTTTTTCAGTTATCGAGTTG TCTATGTCACATCTTACTCTCTTTCTTGTTCTGCCTGCATATGATGACTTTTGATTATTCTTTCTTTGTTTGCTCTTATA TATGATAGTGTTACTTTCTTTTCCCGAATACAATACAAATGCCAGTAGAAGTGGAAAGGATTATATTTGTGCTGTATGTT TTCTCATGCTCACTGAGCTTAGCATGAACTTTTATACAGACAAAAGTTGAGACGCTTGGAGGTTGCTTTGATTGAATATC GTGAGTCTCTTGAAGAAAGGGGAATCAAAAACTTGGAGGAAATTGAGAAGAAAGTTCAGACGCACCGGAAACGGCTGCAA GCGGAGTATGGGTTATCAGATTCTGGTGAAGATGGACAAGGCAATAGTAAGTTCTTTCTGGCTTACTCTGTTGAAAATCA TATAAAAGCAATTGACTGTTGCATTTTTTAAATGACCCCAGGATGACAGATTTTGAAAATTCAATTGACTGTCTCGGTAG ACATTGATTGAGATGTAACATTTCTTTGTGATTATCCAGACAAATGTCTAGCAAATTAAATAAGTCATCTGTATTAAGTC AAATATCATATGCTGCTATCCAGTTAGAAACTTTCTGCAATTGCATGTGATGATGCTACTTTGGGTAACACTGTAACAGA AATTAAGATGATATTATTTTTATATGATTTATGTATGATTTGTACTTGAAACATGATTTGGTTATAATAATTCAATTGCA TGGCTTCAGCATATTCTTTTACATGTGTACCATGTTTTCCAATTTTGACGTTGTTTGGTTCAAAGGGTATGTGTTAATGA ATCTGAACAGTTAAAGATGCTATGGTGGAATTTGTCTGCCCCATTTTCATTGATATATGAACTCTGCTATGCTATGTAAC TTCCTCACAAATTTACCTTGGCTGCATTTAATGTTGTTTGCATTTTTAACTCATTATGTTGTATGTCTTTGGCGTTCTGG CATCATAGTCATACACAGCTCCCTGTTGCTAATCCTCATAATCCGCTCTCTCTATTAAAGAAAGAAAACAAATGATTATT GTTATACTTTCCAGTCAGAATGTCTGATAATGTGTTTGGTAGGAGAAAAAATGGAAGAAAATAATAGGCATGGAGTGCAA ATCTCTCTAGGCATAAATCGTGTCATATGATGCATGCTTTCATACATTCCTCTGAGCATATTGGATTTCTTTCAGAAATA TCATTAAAATGTGAAGATCTCTATTAGTAATTCTAGAGTGAGAATTTTGTTTGGTAATTTTACACTTGCAGGAAGATCAT CTTCAGAGAGGAGGGATAGACATGATTTCTCGAGGAAACGGCACCGTAGCCCCAGTCCAAGGGGTAGTCCACAACACAGA TTATCTAGCAAAGACAGAGATAGAGAACATGATTTAGAAAGGGATCGAGACCGACAAAGAGATAGAAGTCACGATTTTGA TAGTGATAGAGGAAGGGACCGGCACCGGGAAAAGAGTGGAAGCAGGGACAGGGATGATCATGATAAGGATAGAAGCAGGG ACCGGAGACGACGGGCGAAATAAGAACATTTCTTGTGCTCTCCAGCAGAGATCTGCAGATTTGTTTGTAAGCGTCTGGAC AGTTGGCTTGTTTTCATCAAAGGGGGTCCTGGCGATGTGAAACCTGGTGA
CDS sequence (LotjaGi4g1v0148600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGCTAAAGCATGAGCAAGAGATGAGGGAGAAACGAAATCAAGAACGTGAAAATTGGCGTGATGGGCGTCCGGT AGAACATTCTACTACTGTTAGTCGTTTTGATGAACTGCCTGATGATTTTGATCCAAGTGGAAAACTTCCAGGATCATTTG ATGATGGTGATCCACAAACTACAAATCTTTATGTTGGAAATCTCTCGCCCAAGGTGGATGAAAATTTCCTTCTCCGTACT TTTGGAAGATTTGGACCTATTGCTAGTGTGAAAATCATGTGGCCTAGGACTGAGGAGGAGCGAAGGCGGCAAAGAAACTG TGGTTTTGTGGCTTTCATGAACCGAGCTGATGGACAGGCTGCTAAAGATGAAATGCAAGGAGTTGTGGTTTATGAATATG AATTAAAAATTGGGTGGGGAAAGTCTGTTGCGCTCCCGTCACAAGCATTACCTGCACCTCCACCGGGGCATATGGCCATC AGGAGTAAGGAGGGTAGTACTGTGATCTTGTCTGGCCCATCAGGTCCACCAGTAACGTCTGTGCCTAGTCAGAACTCTGA ACTGGTTCTTACTCCTAATGTTCCTGATATAATGGTTACACCTCCTGAGGATGACCATCTAAGGCATTTAATTGATACTA TGGCTTTGTATGTCCTGGATGGAGGATGTGCTTTTGAACAAGCAATTATGGAGAGGGGTCGTGGCAATCCTCTTTTTAAT TTCTTATTTGTTCTTGGCTCGAAGGAACATACCTACTATGTTTGGAGACTCTACTCATTTGCTCAGGGTGACACTCTTCA AAGATGGCGGACTGAACCTTTTATCATGATAACGGGTAGTGGAAGGTGGATTCCTCCCCAATTACCACCATCGAGAAGTC CAGATCATGAAAAGGAGTCTGGTTCCACACACGCTGGAGGAAGAAGCAGGCGTGTAGAGCCTGAAAGAACATTGACTGAT GCACAACGGGATGAGTTTGAAGATAGGCTGCGTGCTTTAACATTAGAGAGGAGCCAAATAAAAGAGGCTATGGGGTTTGC TTTGGATAATGCTGACGCAGCTGGGGAGATAGTTGAAGTTTTGACGGAATCCTTGACTCTTCGAGAAACTCCTATTCCAA CGAAAATTGCAAGGCTTATGCTTGTCTCTGATATTCTTCATAATAGTAGTGCCCCTGTAAGAAATGCATCGGCATATCGG ACAAAGTTTGAAGCAGCACTGCCTGACATAATGGAGAGTTTCAATGACTTGTATCGTAGTATAATGGGACGTATTACTGC AGAAGCCCTAAAGGAACGAGTCCTGAAAGTTCTGCAAGTGTGGGCCGACTGGTTTCTCTTTTCAGATGCTTATGTTAATG GCTTAAGAGCCACTTTCCTCCGACCTGGGAACTCTGGTGTGGTGCCATTCCATTCCATATGCGGTGATGCACCTGAGATT GAGCAGAAGATCACTTCTGAAGATACAGTTGTTGGTGGCAAGATCAACCAAGATGCTGCATTGGCAATGGGTCGAGGAGC TGCAACGCAGGAGCTAATGAATCTTCCTCTTGCTGAGCTAGAAAGGCGGTGCCGACACAATGGATTATCACTAGTTGGTG GTAGAGAAATCATGGTCGCAAGGTTGTTAAGTCTTGAAGAGGCAGAAAAACAGAGGGTTTATGAACTGGATGATGAATTG AAATATCCCCACGGCCAAGCTAGTTCTGCGAAATATTCAAGTGGTCGGCGAGAAACAAGTGCAGAGCTTGAACCAGTGGG ATATTCTGGATGGAACCATTATGGGGATGATGATTTGCAATCACAAGGCAAAGAGTCTGTACCTTTAGCGCCAACTCTTC CTATTCCACAGCCTGAACTTAAAGCCTTCACAAAAAAGGAGAAGAATGACCCGGTTTTACCTGCCTCTAAATGGGCTCGG GAGGATGATGAGAGTGATGATGAGCAAAGAAGTGGAAAAAATCTCGGATTAAGCTACTCATCTTCTGGCAGTGAGAATGT GGGTGGTGGTCATATTAAAGCTGATGAATCAGAGTCTGCTGCTGATACAAGTTTTTCAGCTCATGCTGACAGTGGACTGA ATGAAGAACAGAGACAAAAGTTGAGACGCTTGGAGGTTGCTTTGATTGAATATCGTGAGTCTCTTGAAGAAAGGGGAATC AAAAACTTGGAGGAAATTGAGAAGAAAGTTCAGACGCACCGGAAACGGCTGCAAGCGGAGTATGGGTTATCAGATTCTGG TGAAGATGGACAAGGCAATAGAAGATCATCTTCAGAGAGGAGGGATAGACATGATTTCTCGAGGAAACGGCACCGTAGCC CCAGTCCAAGGGGTAGTCCACAACACAGATTATCTAGCAAAGACAGAGATAGAGAACATGATTTAGAAAGGGATCGAGAC CGACAAAGAGATAGAAGTCACGATTTTGATAGTGATAGAGGAAGGGACCGGCACCGGGAAAAGAGTGGAAGCAGGGACAG GGATGATCATGATAAGGATAGAAGCAGGGACCGGAGACGACGGGGGGTCCTGGCGATGTGA
Protein sequence (LotjaGi4g1v0148600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEELKHEQEMREKRNQERENWRDGRPVEHSTTVSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPKVDENFLLRT FGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAI RSKEGSTVILSGPSGPPVTSVPSQNSELVLTPNVPDIMVTPPEDDHLRHLIDTMALYVLDGGCAFEQAIMERGRGNPLFN FLFVLGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPQLPPSRSPDHEKESGSTHAGGRSRRVEPERTLTD AQRDEFEDRLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLRETPIPTKIARLMLVSDILHNSSAPVRNASAYR TKFEAALPDIMESFNDLYRSIMGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATFLRPGNSGVVPFHSICGDAPEI EQKITSEDTVVGGKINQDAALAMGRGAATQELMNLPLAELERRCRHNGLSLVGGREIMVARLLSLEEAEKQRVYELDDEL KYPHGQASSAKYSSGRRETSAELEPVGYSGWNHYGDDDLQSQGKESVPLAPTLPIPQPELKAFTKKEKNDPVLPASKWAR EDDESDDEQRSGKNLGLSYSSSGSENVGGGHIKADESESAADTSFSAHADSGLNEEQRQKLRRLEVALIEYRESLEERGI KNLEEIEKKVQTHRKRLQAEYGLSDSGEDGQGNRRSSSERRDRHDFSRKRHRSPSPRGSPQHRLSSKDRDREHDLERDRD RQRDRSHDFDSDRGRDRHREKSGSRDRDDHDKDRSRDRRRRGVLAM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 840 | 840 | 0.0 | – | |
| PANTHER | 1 | 840 | 840 | 0.0 | – | |
| MobiDBLite | 1 | 44 | 44 | - | – | |
| Gene3D | 1 | 144 | 144 | 5.8E-19 | ||
| MobiDBLite | 1 | 58 | 58 | - | – | |
| SUPERFAMILY | 54 | 149 | 96 | 4.16E-20 | ||
| CDD | 60 | 143 | 84 | 8.27336E-46 | ||
| ProSiteProfiles | 61 | 142 | 82 | 14.266 | ||
| SMART | 62 | 138 | 77 | 2.3E-16 | ||
| Pfam | 63 | 135 | 73 | 6.2E-12 | ||
| SUPERFAMILY | 183 | 265 | 83 | 6.8E-20 | ||
| Gene3D | 187 | 265 | 79 | 5.7E-18 | ||
| Pfam | 208 | 260 | 53 | 7.6E-15 | ||
| SMART | 208 | 262 | 55 | 1.9E-17 | ||
| ProSiteProfiles | 210 | 253 | 44 | 12.125 | ||
| MobiDBLite | 282 | 320 | 39 | - | – | |
| MobiDBLite | 292 | 320 | 29 | - | – | |
| Gene3D | 318 | 461 | 144 | 3.6E-29 | ||
| ProSiteProfiles | 318 | 463 | 146 | 38.025 | ||
| SUPERFAMILY | 322 | 459 | 138 | 1.57E-8 | ||
| Coils | 323 | 343 | 21 | - | – | |
| CDD | 323 | 457 | 135 | 2.53188E-10 | – | |
| SMART | 325 | 460 | 136 | 9.9E-19 | ||
| MobiDBLite | 586 | 698 | 113 | - | – | |
| MobiDBLite | 621 | 651 | 31 | - | – | |
| MobiDBLite | 652 | 667 | 16 | - | – | |
| Pfam | 693 | 740 | 48 | 1.7E-6 | ||
| SMART | 693 | 742 | 50 | 5.4E-10 | ||
| Coils | 694 | 714 | 21 | - | – | |
| Coils | 720 | 740 | 21 | - | – | |
| MobiDBLite | 731 | 846 | 116 | - | – | |
| MobiDBLite | 782 | 846 | 65 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
Expression pattern of LotjaGi4g1v0148600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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