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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0172800 |
| Transcript ID | LotjaGi4g1v0172800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Rhamnogalacturonate lyase; TAIR: AT2G22620.1 Rhamnogalacturonate lyase family protein; Swiss-Prot: sp|Q8RJP2|RHIE_DICD3 Rhamnogalacturonate lyase; TrEMBL-Plants: tr|K7MSC9|K7MSC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0172800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:34365846..34375168) extracted from Lotus japonicus Gifu genome v1.2.
CATATTTTAAGGTGCGCCTTAAGGTTCCATAGAACAGAAAGTACACGAATTACTAATTCACAGGGTAGAAAAAAAACCAA AACAGCTGTTTCAGTTTCAGTTGGTCTTTCATCTCTATGGTTCTGTTTATTTGATGCAAATGCATTGATAAAAGTCTAAA GGTGTGTCCATGTGTTTTAAAACGCTCTTTCTTGTCAAAATTCTTTTGATTATCAACCATTTAGTTTGGTAGTTTGATAA TACTCTTCAGTTTTCACCTTTTTTACAGCATTTGGCATTCTTTTAATTCCTTCACCATCTGAAGTTTTCTTTAAAATGAA GCTGCTAATTTTTGTTTTGTTTTGCAAGTTCATAATTTTGTGAAGATATGAAGATGGTGGGTAAGAAGAGTAGAAGTGTT TTCTTCCTTTGGTGGTTTGGAATGACTTTGCAGCTCTGCTTCTTGCTCTGTTCCTGTGCTGAGAAGACATCATTCAGGTT GGTTCTCTCCTGCTTCTCAATTTGGCTAGAGTACAAAAGGGAAAAAACAGGGGAAAGAGAAGCATGAAGCATTAAAACAG AAGACATTACATGTTAAGTTGTTGTTTCAATTCTTTTCATGAAAAGTAGTATAATTAAAATGAAAAAAGATCTGCGAGAG AGAGAAAGAGGGATTAAGTGGGAAAATAAGAGAGTCACGGTTTCTGTCTTTTGTGTTCCCATCTCACATGAGAACTTTTA CAATCCCATGTCTTTTTGTTATGGTTTCAATTTTGAGCCCCGTTCATAAATCACTAATAATAGTAATAACATTTTTCATA CTTCTGATTTTTTTTTCTCAATTCTATTTTATTTTATCACATTTATCAGTTATCACTTAAATCTCTAATCTTCTTATTTC ACTATGATGTCTATCGAGTTTGGGTGTAAACCAAGCATAGTTGTTTCAATTTTAAACTACTTTTTAGTTGTGTATGGTCT TATACTTTATGGGAATGACATGATGCCTTTGCAAGTTAGCCATTGTAACAATGGAAAGAATCGATTCTTGCACCCACTAA CACTTTTCACATGGCTATGTAAGAAGAAAGATTAGTAAACGTATAAAATGTGTAGACCACTACAGAAAGATAGGAAGAGA TGAGAAATAAGTGATAAAAAAAAACATGTTGAGTATTTATACTATTTCAGTGTATACCAACCATTACCTTGTTATCTTGT GTGCTTGCAAAATACTTTTAAAGTGTTAAGTGGTAGACAAGTTACGTCTAGTAAAAATGAGATCACATTATCACAACATC AAACGCTAAAGAAGTATTTTGATGAAAGGGCCACCTCCGTTTCCTGAATAAGTAAAAGACAATAAGAAAAAAAACTAACG ACAAAAGTAGTTACAATTTGTTAATTATAACTATTAATCATTTAATCGCATTCTGTGACACCTACTCTGTATCCACCGCA ACAGCTATTCAGTGCTGATAGAAAATTCTCCTCGTAATTATTTTTTACTTTAAAATTAATTATAAAAGAAATTGAACCAT ATAACCAAATATCCTATATTGTGTTCAAGATCAAATGCATAGAATCAATAATTTCATACGCTGGGACGATTTTCACAGAA AGAACAAAGTTGGGGACCAAATGTGTAATTAAGTCTATTTTATTAATCAATTCTAGACCAATAATTAGTCATCCAGCCTT TGATATCAAGTCAAGTGATGAAGCAATCTACACTTATGTTATTTGCACACTTTTGGGCAAACATTTCCCATGTACACATC AATTGCAATGCTCTGTACGTGTTGGTGCACGTTACCTTGTATGTTCAAAATGGTCATACCCGTGATTAAATAATTTCGGC TTAATTACAACTTTGGTCCCTGACGTTTACCAATGCCACGATTTTAGTCCCCCACCTAATTTAATTACATGGATGGTCCC CGACGTTGTAGGCTGCGTGCAACGTTAGTCCTACCGTTTATTTCTTAATGGAGGAGGCTTACGTGGACGTTTAGTTGGAG AGAAAAAGGAGATCTGAGGAGAAAGGGGAGCACGTGAGTATCACGTGAACTCACGTGAACCTTATATTAACCCATTATAC CCAAATCTGAAACCCTAGGGATCTAAATCGCGTTACCTTCTTCGTTCCAGGGAGGTCAGGGGTTTGGGTATAATGGGTTC AGATAAGTGTCACGTGATACTCACGTGCTTCCCTCTCTCCTCATACCTCATTTTTCTCTCCAACTGGACGTCCACGTAAG CGTCCTTCATTAAGAAATAAACGGTAGGACTAACGTTGCACACGACCTACAACGTCGGGGACCATCCATGTAATTAAATT AGGTGGGGACCAAAATCGTGGCATTGGTAAACGTTGGGGACCAAAGTTGCAATTAAGCCAATAATTTGTCAAATTCAACT ATGAAGCTTTTCCTTTGCTGTATTGTTCCCTTGATAAACAATTTTGGTTCTGAATGCCCATCCCATTTTCTCTGTCTGGT TTGACTTAAATTGACTTTTCGAATGGGATAAAGAAGAAAAATATGCAATGCCCATAATTGAGAAGACAGAATCAAAACAT GTTTTCTGTTTGACAAAATTCAAATTAAGATGCAAAAACGCAAAATATAACAAAACTCCATACTAATGATTGCTCGTTCC ATGCATTCTGTTCATATGCAGAAGAGGTTTAAGGGACATAAACAGCATGGAATCAACATCTATTCATTCTGGACTCCATC TTGACACAGAAAACCCTAAGCAGGTGATACCAGCTGCCTCTTTGAACAAGTTATTTTGTTTCAAAATTAGAGTAAACTCT GTTCAAGTGAACTCCGAGCATAGTGCTCAGAACAGTATTAACTCTCGTGGAGGATACATGTTTTATAAAAAAAGCGAAAA AATATTTTAAAAACGAAATAAAATAATCCGTTAGATTTCATTTTTGGGTCTGAAAGAACGACTATGACCATGACATTTGC AGTCTACTTTTTTTCAGTTGGTGGTTCATAATGGTATTGTTTCCGTCACTTTGTCAAGACCTGAGGGCTATGTCCTTGGA ATATCTTATAATGGAATTGACAACATTCTTGAAGCTGAAAACGATGAACAAGATAGAGGGTATGTACTTACTTCCTATGA AATTAACCAAGTTATAGTTTAACTAATCAAATTTGGCAAAAAATAGTGACATGCAAACTAGTCAGGGTTAATTTAATTGA CCGAATTTGCAGGTACTTTGACGTCGTTTGGAATAGGCCAGGAGAACCTTATAAATTTGAGAGGTATAATTTTTCACTGC TCAAATGTATTATATTAATATTTCGTCCACTCGATGTCAAAAAACTAGAAATAAAGCAATGCACAATATTTGAAGTGAAT TAGATTTGAGCATTGCTATAGTGCACGAAGGAATTGGCACACCCAGAGCACAACAAGTTGTTTCATGTTTTATGGAAAAC AACTCAAATTGTTAATAAATAAAAAGACAAAAAAAAAAATTGGTAAGATGCACTTGTCGTGCGTCTCGTGCATGGAAGTT CTCGTGCCTCATATCATTATTCATTAGATATTAATTTACTATTGACTATATATGCTGCAGAATCCATGGGACAAATTTTT CTGTTATAGCAAGTGATGGGGATTCAGTAGAGGTTTCATTTTTAAAGACATGGACATCTTCCATGAGTGGCTCAAGTGTT CCCATAAACATAGACATAAGGTGGATTATTTGTCTTAATTTTTTTATAGTAAAATTTATATATGACCTAATTAAAATTCA TGAAAAAAAAATTAATTTGTAAATGCAGATACATTTTTCGAAGTGGTGATTCAGGATTTTATTCGTATGCAATATTCGAT CGCCCTGAAGGATTGCCAGCTGTTGAGGTTGTTCAAATTAGGTTTGTTTACAAACTCAAGAAAGACAGGTAAGACTTTAG AATTTTGTACATGTGACTATGTGAGCATTGAAGGAGGCCTAACTTATCCCAAAAGCTTAAGCTGTTGGGTAAGGGCCACA TCAATGGTTTTATATTATATTCTAACACGCCCCCTCACGCAAGAGCCCTTTGGGCTTGAAGCGTGGATAAATGCACAGGC CCACCTACCATGTGCTTAATTAAATTCCACTTTTAATTAGAAAGTGAGGGGAGCATGGATCGAACTATAGACCTCTCGGT CATAGAGGCTCTGATACCATGAAGGAGGCCTAACTTATCCCAAAAGCTTAAGCTGTTGGGTAAGGGCCACATCAATGGTT TTATATTATATTCTAACAAGCATAAGATTCTTACGTTTATCAATTGGAAATAAGAACTATAGGTGTAGTTGGAGGTGGCT TTATCATTGTTTTGCCTCTCCATTTTGTTTTTTCCTTCCCCCTTGCTCTGTTTCTCTGTTTCCCTACCTGGTTTCTTGTT CTCTTGTTTCCTGTTTTTTGACACTTGAATTGTACATTGATTCTTTTGGGCACTTCTTGTGCTTTTAATAAACTTTTGGC TTATCTAAAAAAATTAAAATTGGAAAAAAGAACTATTACAATGTTTTTGGTACATCGGTAAAACATTTTTAATTTGGTAT AAATATTTAAATTTATATAGTAGGTATAATATTAATACATTTTTTTTAATTAGGTTCTATAAACTTCAATTCCACTCAGT TCTTAAATTTTATAAGGTTAAATGTGTTTTTAGTACCTATAAAAATATGGGTGAATTAAATTTTGTCATTTCAAAAAATT TCATAGGTAGTCCCCAATATTATTCATGAAATAAGTGAAGCTAGTCCCTATTGTTCTTTTTGTGGTTGTTTTAGTGCATT ACTGGTTATTTTAACTGCCACAAATTATTTATTCTTAATTTTAGGGTGGTTAAACTGCCGCAAAATAAACTAAGGACTAA TTCCACATATTTCATTAACTTTGGGGACTAAAAACTATGGAATATTTTTGAAGTAACTAAATCCAATTCAACCCTATTTT ACAGTACTTAAAACATATTAAGTCCAATTTTGTAATCTATTTGCATTTAAGCCTAAGTGTTGTATAAATTAAAATATTTC TTAGACTCAACTGCCAAAAATCTGTGTTATGTGGAAAATTAATATATGTTTGGATATGGGAATCTCATAATCAATTTTCA GTGAGTAAAATCACTTTTGAATAATGAATTTATTTGATTTTCAAAATAAATTTTATGTAAAACTTTAACATTACATTGAA ATTCACAACATTATCAGAAAAGTAACTTATTTTATAAATGTATCTAAACATAAATTAGTACACCTTCAACTCACTTCTTC TGGCATAGTGATCTATTGTGCCAAAATCAATTGAAACAATTTTGATTCAATGATAGTTTTGTCAAACTTTAGTGTCTTGA AAGAAAAAAGAATTGAAGTTTGTGATTGAGGGATAGAAAAATCATTGATACAGGTTCAACTACATGGCTATATCAGATGC CAGGCAAAGATTGATGCCAACAATGAGAGATAGAGAAACGGGTCAGATTCTGGCTTACCCTGAAGCTGTTCTTTTAACTA GACCAACCAACCCAGAGTTCAAAGGAGAGGTAGGTACCAATTTTTTATATGCTTGGTTGATTTGCAAAAGGCTTTTGGCT TATTCTTTGTTTTTTTAGTGACTTGTACACATTCCCACATATTCATTATGATTGATTTATATTTTAAAATGAATACATTT TTTTTACTTTTTATAAAATATGTTGACTTTTTAAAATATAAACTAATCAGTGTGTTTAAATGTGTCCTATACTATCAAAA GAGGCTTTTGGCTTATAGTTTGTTTTGCTAGTGACGTGGCTTGTGGTCTCAAATGCCCGTGAATGAATGATTAGTTTTGA TTTTATTTGCTTATTTGGCTTAAAACAAAATGAACAAATAATTGTTTATAGTTGTTGGGTTCAGGTGGATGACAAATACC AATACTCATGTGAGAACACAGACAACAGTGTTCACGGATGGGTTAGTACTCTTGATTCTGTGGGTTTTTGGATGATAACA CCCAGTAACGAGTTCCGCAATGGTGGCCCCATCAAGCAAGATCTTACTTCTCACGTTGGCCCCTTCACTCTCAATGTATG TCCCAAAATCTTGTCTAAATCTACAAACAGAACACTCATAGTTCCCAATTTCAATGTGAAAGAGTTCAATTTGTCAATCT TTTGTTTACTTTCCCTAAATGATCATTATTTAAGATAAGTGAAATTTATAACCTGTTTATTTCAAATATTATCGGTCCAC TTAGGACCAAGGTAATTTAACCCAAATTTTTCTAGTTTCGTCAGACAACTCCCAAATTAAAATGTATCTCCAAATGTGTT ATTTCTCATTTTTCATAATTCCTGACTAATTTGCATACTTGTTTTTTTGTTTAGATGTTTGTGAGCACTCACTATGCTGG GAAGGAGGTAACCATGGTATTTGAAGAAGGGGAAACTTATAAGAAGGTTTTTGGCCCTGTATTTGTGTACCTTAACTCTG CTTCAACCAATGGTCACAATACAGTATCCCTCTGGTCAGATGCTAGCAAGCAGGTACTACTAGTTATGACACATTATTAG TGCTTATGTTATGTTTTGACACAATTTGATTTTGTTCTTTGTCCAAAATTAGTTGTCCAAGGAGGTCAAAAGCTGGCCTT ACGATTTCCCTAAATCACAAGATTTCTGTCCACCTAGTCAACGGGGAACAGTATTAGGAAGATTGCTAGTCCAAGATTGG TAAATTTTAATGCCTTGTTATACCCACATTTTATTCTTTAATTTTGTACTATATATAAATATATTAAAGTCGCTACAAAC AGATGATTGAGTCAAGTGGTGCATACTTAATTCATCTTAAAAAAAGTCATGAATTAGAGTATTGTGTTTGGCTTAAATGC CGCTGGAAGAGCTGGTCTCACTAGGATAGGAATGTTTTGACTCGACCAGAATTGGCTCTGTAGAAAATACATATATTATT ACATAAAAAAAGCAGCTATTGTTTCTCATTTCCCCTGTTTCCCAGGCCCTTCAAGGAAGGAAAAATTCAATATCCTAACA ATGCTTATGTTGGTCTAGCTTTGCCTGGAGAAGCAGGATCATGGCAGAAAGAAAGCAAGGTATATTTGGTGTTGAACTTG TTAAACATACTTATTGCATGTCTAGATCAACTTTTATTTCCTCATAATCAATTCTGATACTCACATAAGCTTCTGCACAA AATTGATTATGCATTTATAATTACTTGTAGAAGGAATTACAAACATGAACTTATTTTCATGAATTTCGGATTGTGAGGCA GCTTAAATGGTTTGAATTATTACACCATTCACAGGGCTATCAGTTCTGGACTCAAGCTGACTCAAAGGGATACTTTACAA TTAATAATGTTGTGCCAGGTGATTATAATTTGTATTCTTGGGTCCCTGGCTTCATTGGTGATTACAAACATAATGCAAAA ATCACCATCACACCTGGTAAATTATCTTTAACTCTTGTGGGTTTGGTCCAAAACTAGCTTTAACTTGCTCAATTCATCAA TTTACAATTACTTGATTTAACTTGTAGGTGGAGTCATCAAATTGAGTACACTAGTATATAAACCTCCAAGAAATGGACCA ACAATATGGGAAATTGGGGTCCCAGATCGCTCGGCTGCTGAATTCCACGTTCCAGACCCTTACCCTACACTTCTGAACAA ATTATACAGCAAACTAGGCACAGACAAGTAATTCAAAAAACCGTTATTACGAGTCTTTCCCATTTACGGTTAAAAAGTAT GAAAACCGAAAAATACCACGTTCTGAAAGTTGAAGTAGCGCGATATTACTTCAACAAGAAGTATCTCAAGGATGTGTTAT TATGGTTTTCATACTTTTTGACCGTAAAGCAAATGGGTACAATTGCTACTTCTGTTAGTCTCTCAAATCTGTTTATGTTA TTACTTCATTTAATACATTTAAAGCATCTCTATATTTTCTGCAGGTTTAGGCAATACGGGTTGTGGGATCGTTATGCTGA TTTGTATCCTAGAGATGATCTTGTTTACACTGTTGGTAAAAACAAGTATAGTAAGGATTGGTTTTTTGCTCATGTTACAA GGTAAATTAAATTTTGGTTTTGAGAATGATGGTTAAATTTTAAATGTTTTTTGACTCTGAATTGCTCATTATGCAGAAAC ACAGGAAATATAACATTCAAGCCAACGATATGGAAGATTATATTCGAACATGGTGAAGACATATTGAGCGGAAAATACAC ACTCCAACTGGCTCTGGCAAGTGCTACTGATGCTGAACTACAGGTACACAATTTCTTAATTTTCAGATTGTCTAACTTAC CCCATAAAGTTTTATATAACCTTGTTTTAGAAAGATCAATAGTATTATTTGTAAAACTTCAAGTAAGGATTATTTTCTAT CCCTCTTATCTCTTAATGTGCACCTAGAATGGGGTTATCATTATTGAGTAAGTTAGATATATGGCTCATTCTTTTAACAT CTAGTTGCTCATACTGCAGATACCTCATAAACTATACTTAATTGTAAAAAAAAAATGACTGAAAATTTTCACAAACTCAC CATTAATTTTTGTGTGTTTGATAATTAAAGAAATAAAAGAGTTTAAATGAATGGTGAAATGATGAAAATTGACATGATTA TGATTTCTTAATACTCCCTTTCTCTCAATCTTTTTTCTTCTCACAACACAACATCATATATCACATTCATTACTTATTTC TCTTCCTTTTTCACCCTCCCTGTCTACACGACTACACCCGTTGATTGTCTATCCAACATTTTCCTTCTTTGAACACAACT GATGTAGAGTTATACTTTAGCTGACATTTCTAATGGATGTTCATATCAGGTTCGTTTCAATGACCCTAGCATATATCCAC CCCACTTTACAACAGGGCCTATAGGAGGTGACAATGCAATAGGAAGGCATGGCATCCATGGATTGCATAGGCTGTTCAGC ATTGATGTACCAAGTAATCTTCTTATGAAGGGAAAGAACACCATCTATCTGAGGCAGTCACTAGCCATAACTCCATTACC AGGACAAATTAATGGAATGATGTATGATTACATCCGCTTGGAACGACCTCCGACTCCAAATACATGATTAATGTGTCACG CCTCTAGTTGACACAGTAAATATGCGTGCAGTTATGCTTTTTGTATTAAATTTCAATTATTTTTTATAACTGTGCTAGAA AGTTGTAATTGATTTATAAAATGAATTATTTCATTTGTATTTTCAACTACGTAATTAATTGTCTCTATTTCCATGTATTT GTATAAACATTTACAATAAAGAAAAATTACTTTCATCCGGTTC
CDS sequence (LotjaGi4g1v0172800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATGGTGGGTAAGAAGAGTAGAAGTGTTTTCTTCCTTTGGTGGTTTGGAATGACTTTGCAGCTCTGCTTCTTGCT CTGTTCCTGTGCTGAGAAGACATCATTCAGAAGAGGTTTAAGGGACATAAACAGCATGGAATCAACATCTATTCATTCTG GACTCCATCTTGACACAGAAAACCCTAAGCAGTTGGTGGTTCATAATGGTATTGTTTCCGTCACTTTGTCAAGACCTGAG GGCTATGTCCTTGGAATATCTTATAATGGAATTGACAACATTCTTGAAGCTGAAAACGATGAACAAGATAGAGGGTACTT TGACGTCGTTTGGAATAGGCCAGGAGAACCTTATAAATTTGAGAGAATCCATGGGACAAATTTTTCTGTTATAGCAAGTG ATGGGGATTCAGTAGAGGTTTCATTTTTAAAGACATGGACATCTTCCATGAGTGGCTCAAGTGTTCCCATAAACATAGAC ATAAGATACATTTTTCGAAGTGGTGATTCAGGATTTTATTCGTATGCAATATTCGATCGCCCTGAAGGATTGCCAGCTGT TGAGGTTGTTCAAATTAGGTTTGTTTACAAACTCAAGAAAGACAGGTTCAACTACATGGCTATATCAGATGCCAGGCAAA GATTGATGCCAACAATGAGAGATAGAGAAACGGGTCAGATTCTGGCTTACCCTGAAGCTGTTCTTTTAACTAGACCAACC AACCCAGAGTTCAAAGGAGAGGTGGATGACAAATACCAATACTCATGTGAGAACACAGACAACAGTGTTCACGGATGGGT TAGTACTCTTGATTCTGTGGGTTTTTGGATGATAACACCCAGTAACGAGTTCCGCAATGGTGGCCCCATCAAGCAAGATC TTACTTCTCACGTTGGCCCCTTCACTCTCAATATGTTTGTGAGCACTCACTATGCTGGGAAGGAGGTAACCATGGTATTT GAAGAAGGGGAAACTTATAAGAAGGTTTTTGGCCCTGTATTTGTGTACCTTAACTCTGCTTCAACCAATGGTCACAATAC AGTATCCCTCTGGTCAGATGCTAGCAAGCAGTTGTCCAAGGAGGTCAAAAGCTGGCCTTACGATTTCCCTAAATCACAAG ATTTCTGTCCACCTAGTCAACGGGGAACAGTATTAGGAAGATTGCTAGTCCAAGATTGGCCCTTCAAGGAAGGAAAAATT CAATATCCTAACAATGCTTATGTTGGTCTAGCTTTGCCTGGAGAAGCAGGATCATGGCAGAAAGAAAGCAAGGGCTATCA GTTCTGGACTCAAGCTGACTCAAAGGGATACTTTACAATTAATAATGTTGTGCCAGGTGATTATAATTTGTATTCTTGGG TCCCTGGCTTCATTGGTGATTACAAACATAATGCAAAAATCACCATCACACCTGGTGGAGTCATCAAATTGAGTACACTA GTATATAAACCTCCAAGAAATGGACCAACAATATGGGAAATTGGGGTCCCAGATCGCTCGGCTGCTGAATTCCACGTTCC AGACCCTTACCCTACACTTCTGAACAAATTATACAGCAAACTAGGCACAGACAAGTTTAGGCAATACGGGTTGTGGGATC GTTATGCTGATTTGTATCCTAGAGATGATCTTGTTTACACTGTTGGTAAAAACAAGTATAGTAAGGATTGGTTTTTTGCT CATGTTACAAGAAACACAGGAAATATAACATTCAAGCCAACGATATGGAAGATTATATTCGAACATGGTGAAGACATATT GAGCGGAAAATACACACTCCAACTGGCTCTGGCAAGTGCTACTGATGCTGAACTACAGGTTCGTTTCAATGACCCTAGCA TATATCCACCCCACTTTACAACAGGGCCTATAGGAGGTGACAATGCAATAGGAAGGCATGGCATCCATGGATTGCATAGG CTGTTCAGCATTGATGTACCAAGTAATCTTCTTATGAAGGGAAAGAACACCATCTATCTGAGGCAGTCACTAGCCATAAC TCCATTACCAGGACAAATTAATGGAATGATGTATGATTACATCCGCTTGGAACGACCTCCGACTCCAAATACATGA
Protein sequence (LotjaGi4g1v0172800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMVGKKSRSVFFLWWFGMTLQLCFLLCSCAEKTSFRRGLRDINSMESTSIHSGLHLDTENPKQLVVHNGIVSVTLSRPE GYVLGISYNGIDNILEAENDEQDRGYFDVVWNRPGEPYKFERIHGTNFSVIASDGDSVEVSFLKTWTSSMSGSSVPINID IRYIFRSGDSGFYSYAIFDRPEGLPAVEVVQIRFVYKLKKDRFNYMAISDARQRLMPTMRDRETGQILAYPEAVLLTRPT NPEFKGEVDDKYQYSCENTDNSVHGWVSTLDSVGFWMITPSNEFRNGGPIKQDLTSHVGPFTLNMFVSTHYAGKEVTMVF EEGETYKKVFGPVFVYLNSASTNGHNTVSLWSDASKQLSKEVKSWPYDFPKSQDFCPPSQRGTVLGRLLVQDWPFKEGKI QYPNNAYVGLALPGEAGSWQKESKGYQFWTQADSKGYFTINNVVPGDYNLYSWVPGFIGDYKHNAKITITPGGVIKLSTL VYKPPRNGPTIWEIGVPDRSAAEFHVPDPYPTLLNKLYSKLGTDKFRQYGLWDRYADLYPRDDLVYTVGKNKYSKDWFFA HVTRNTGNITFKPTIWKIIFEHGEDILSGKYTLQLALASATDAELQVRFNDPSIYPPHFTTGPIGGDNAIGRHGIHGLHR LFSIDVPSNLLMKGKNTIYLRQSLAITPLPGQINGMMYDYIRLERPPTPNT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 30 | 30 | 7.0 | – | |
| Phobius | 1 | 10 | 10 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| Phobius | 11 | 26 | 16 | - | – | |
| TMHMM | 12 | 31 | 20 | - | – | |
| PANTHER | 18 | 687 | 670 | 0.0 | – | |
| PANTHER | 18 | 687 | 670 | 0.0 | – | |
| Phobius | 27 | 30 | 4 | - | – | |
| Phobius | 31 | 691 | 661 | - | – | |
| CDD | 59 | 342 | 284 | 1.32618E-73 | – | |
| SUPERFAMILY | 59 | 344 | 286 | 2.32E-9 | ||
| Pfam | 62 | 248 | 187 | 2.8E-75 | ||
| SUPERFAMILY | 377 | 478 | 102 | 3.53E-10 | ||
| CDD | 380 | 480 | 101 | 3.79184E-34 | ||
| Pfam | 404 | 476 | 73 | 7.1E-27 | ||
| SUPERFAMILY | 487 | 684 | 198 | 1.45E-40 | ||
| Pfam | 490 | 683 | 194 | 1.5E-45 | ||
| CDD | 492 | 684 | 193 | 3.68261E-45 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi4g1v0172800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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