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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0173000 |
| Transcript ID | LotjaGi4g1v0173000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Rhamnogalacturonate lyase; TAIR: AT2G22620.1 Rhamnogalacturonate lyase family protein; Swiss-Prot: sp|Q8RJP2|RHIE_DICD3 Rhamnogalacturonate lyase; TrEMBL-Plants: tr|K7MSC9|K7MSC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0173000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:34427714..34436960) extracted from Lotus japonicus Gifu genome v1.2.
ACCGTATCCCTAAGTTGAAGGGAAGACTTCTTTAACGTGTAATCGTGGAAACAGAGGGGCAGAGGTTAAACAGAGGAAGT CCAAAATATTTTGCAACATAAAGGAGAGGTTACTGGTCAATGAGTTTTGGTTATAAATAAGACCATTAATATTTCATTTG TCATTTTGTATGTTAGCACGTTTTTTAAGGTGCACATTAAGGTTCCAAAGAAGAAAAAGTACACAAATTAATTCACAGGG AAGAAAAAATTCCAAACAGCTGTTTCAGTTTCAGTTGATCTTTCATCTTCTCTTGTTCTGTGTATTTGATTGATGCAAAT GCATTTGCAAGTCTAAAGAGGTTGGTCCATATGTTTCAAAACGCTCTTTCTCTTGTCAAAAAAAAAATTCGTTTGGTTAT CAACCATTTTGTATGGTAGTTTGATAATGCTCTTTAGTCTTTAGGTTTCACCATTCTAACAGCATTAATTTCTGAATTGA TTTTGGCATTCTTTTAATTCCTTCATCATCTGAGCCTTGGTGTACTTTTCTCTGAAATGAAGCTGCTAATTATTTTTTGC AGGTTCATAATTTTGTCAAGAGATGAAGATGGTGGATAAGAAAAGCAAACGATTTTTCTTCCTTTGGTGGTTTGGTATAA CTGTGCAGCTCTGTTTCTTGCTCTGTTCCTGTGCTGAGAAGACATCATTAAGGTTGGTTTCTTCCTCTTCTTACCATTCT CATTTGGGCTATATAGCAATTCTTTTTTTTTTCTGGTTATCTTTGTGTGTGTCAGAGAGCACAAAAGGGAAAAAGGGGAA GAGAAGCATGAAGCATTAAAAAAGAAGATATTCCATGTTAATGTTGGTGTTTCAATTCTTTTCATGAAAAGTAGTAATTA AAAAGAAAAAGAATGGGGAGAGAGAGTGAGAGAGGGCTTAAGGTAGAAAAAATAAGACAGTCACGGTTTCTTTGTCTTTT GTGTTCCCATGATCTCATCTCACATGAGAACTTTCAGAATCCCATTTCTTTTTGTTGTGGTTTCAGTTTTGAGTTACTTT TTACTTGGGTGCGTCACTTTATACTTTGAGGGAATGACAGGACACTTTTGCAAGTTAGCCATTGTAACAATGGAATTGGA AAGAATCGATTCTTGCACCCACGTCTTCCCTTGCAACCTGACACTTCTAGTTTCACATGGCTCCCTAAAATGGGTGTACA CAGCCCGGCTAGGTCCGACCTGTCTATTGACCCGTCCTGCCCCTGCTCCTTAAATTTGTGTATTATTGGTTTTTTCGAGT TTATTGACGAGTTTGTGTTTAAAAACTGTATTCAATATATATATGGGCCGGATAAAAGTTAAGTCTAATTTCTCTCAACC CATCCCTCAAAGGCTTAAACACCTCTTACCCACTTACTTTAAAATATAGTTTTGTGTATTTTCATTAGTAGTGTAACAAG TGAATAAAGTTTATATTTTTCTCTCCTATTTTTCTATGAATTTTTTTAATTTTTAGTCGTTTCTTTCATTAGTGGGATGA GAAATTACTTTTTAACATCATAAGTATTTATAATTTTTTTGTGAGATTTGACATTGACATTCAATTAGTTCTTCAGGCCA ACCGGACTGATCTTTTGTGGGCCGGTCTATGTTATACTCACATTGTTTTCTTAGATTTTAGGGACTAGTTCAGATTTAAA AACTATCTCAATTAGTATTTAGGGCGGGATGAAAATTAAGTCAAACTTGTCCCAACCTATCCCATGAACACCCTTACTTC CTAAATCCCTAATCCTTCATGCTTGCAAGACAGACTTAGTTTGTGTTTGGATGAGTGTTTGTCAAAAATGATTTTTGGCT TAAAAAAGCCAATCACATTCCTAGATATTAATATTTTCATCTAAAATTGATTCTGGAGTTTACCTGCAGAAAACTAAACA CATTCTTAACCTGGGGTGGGGCACAGGTCACTTGTATCCTATGATACCAAATCCAATGAAGAAAGAAACTAACCATCATG TTTGTAAACCAATTATATTAATCGCATTCTCTGTCATTTACTCTGTATCTGACAGAAATGGTTTACACCAATTATATTGA AATATCCTATCTTAAAATTAATTCTGACACTCAAAATTTGCTCACAATTTCCAAACATGAATTCAGTATTGTCTTAGTTC CTGAAGTCCACCCGTGCACCTAAATTTATGTTATTTTCACACTTTTGTGCAAACATTTTCCATGTACACATCAATTCCAA TGTTCTGTATATGTTGGTACACTACACGTTACCTTGTATGTTCACAAATGGTCATACCCATGATTAAATAAATAATTTCT CAAAATTCAACCGTATTGTTCCATTGATAAACAATTTTGGTTCTGAATGCCTATCCCATTTTCTCTGTCCTGTTTCACAA AAATTGACTTTTCGATGGGGATAAAGAAGAAAAATATGGAATCCCCATAATTGGCAAGACAGAACCAAAATATGTTTTTC TGTTTCACAAATTTCAATTTAGCTGTCATTATATTCTTTCTTTTTTAAACATTGCCATGTTGCAAACACAAACAATGACA AAAGTCCATGCTAATGATTGCTCTTTTCATTTTAGAAACCAATTATTTCCATGCATTCCGTTCATCTGCAGAAGAGGTTT AAAGGACATCAGCAGCACAAAATCAACATCTATTCATTCTGGACTCAATCTTAATACAGATAACCATCAGCAGGTGACAC AAGCTACCTTTATGAGTAAACTATGTTCAAGTATCTTTCTTAAATTTCGTCCTTTTTAAAGAAAATTTTATCAATTTAGT GTGTTAGCATTAGCCTTAGTAGCATAATTGCCAAGTTTTAAGGCATGACTTAGCTTTTTCAATGACCTAACCCATTACTA GAATGTTAAGTTTATTTAACTGAAAATGCCTCTTAAAAAGGCCAAACAAGTTAGCGGGCTAATAAGGTAGCTATCGAACT ATTAATAAGAATAATATTATGTAAATAGGTCTGTCTATCCGGCCAAATATTTTTTTTTTATTGTTTGAGTCTAACCTTTT TAGTTAATCAACCTTTTAGAATGTCTAAGTTCAACCCTTTTAATAAAATTGTCAAACCAAGTCAAGCCTTTAACAAGCCC GACCGCGGGCACCTAATGAGTTGTTTACCCTATTTTCACCTTTTACCTAGAGAACTAGTTCAATCATGATATGAATCTTA ACTTGAATAATATTGCAATCCATGGAATATACTAGTCTTATTAAAAAAAAAGTCTAGAACTTATTTGAAAACGAAAGAAA ACAATCCGTTATATTTATTCTTTTGGTCTGAAACATGTACTTTGACCATGACAATTGTTGTCTACTTTTTTTCAGTTGGT GGTTGATAATGGCATTGTTTCCGTCACTTTGTCAAGACCTGAGGGGTACGTCATTGGAATATCTTATAATGAAATTGACA ACATCCTTGAAACTGAAAACGAAGAAAAAGATAGAGGGTAAGTACCTACTTTCCTATGAAATTAACCAAATTATAGTTTA ACTAATCCAATTTGTCAAAAAAAAGTCACATATGCAGCTAGTCATGGTTAATTTAATTGACTGAATTTGTAGGTACTTTG ACGTCGTTTGGAATGAGCCAGGGAAAGCTAGTAGCTTTCAGAGGTATAATTTCTGTCTTTCTCAATTGTATTTAATTAAA TTAAAACATCATTTTTCGTATACTCAATGACATTTAATAGAAATTAAAGCAATGCACAATTCCTACTTTGAAGTGAATTT TTTAGGGATTAATTCACAATTGAAACTATATATGCTGCAGAATCCATGGGACAAATTTTTCTGTTATAGCAGCTGATGGT GATTCCGTAGAGGTTTCATTTCTAAAGACATGGACATCGAGTGATTCAGATGTTCCCATAAACATAGACATAAGGTGGAT TATAAGTTAATTTTCTCAGTAAAATCTATATATATGACCTTATTAACATTAACTCATGAAACAAATTTAATTAATATATG CAGATACATTTTTCGAAGTGGAGATTCAGGATTTTATTCGTACTTAATATTCGATCGCCCTGAAGGATGGCCAGCTGTGG AGGTTGATCAAGTTAGGTTTGTTTACAAACTCAAGAAAGATAGGTACGTATCTAGAAAATGGAAATTATACTACATCCTT TGAGAAAACCGTTTAAGTAGACCTTAGGATTTTTTATATGTGTGATCAAAAGATTCCTATTTATTGAAATAAAAAAGCTA CTAATAATGTAGGCATAAAGATTAATACATTTTTTTTAACTTGTTCCTATAATGTTCAATTTCCCTCAGTTCTTAAATGC TTATAATCTATCTCAATTTAACCCTAATTGCATTTTTGTATAAAATAAAATTGTTCCCATAACTGAGTGTGATGTCTTGG GGTGCATAGACTTCGAGTGTGAAGAAAAAAGTTAGGTAAATATTTAATAAGGGTAGACAATGAGAAAAAAAAAAAAAAGA GACGCGATAAATATGATTTATGATATTGTAAAATGTGTGAGAAAGAGTAAAAAATTGGGCGGATATGATGAATGTAATGT CTAGTGCTACACATGGTGCAGTGAGTATCCAAAACTAAACTATTTTATGAGGTATTGAACAAGATTAAATTAATAGTTTT GTCAAATTTTAGTCTTTTATTCGTTGTACATGTCAAATTCTTCTTAAACTAGCTCGTGCCTCTTGTATGAGCTAATTACT CCACTAATTAAGATATGGGTGTTACACCTCAAACACGTTTGACCCCCCGCTATATTAGGAAAAAAAAACTAGTGTATTGA AAGGAAAAAAATAAAATTGAAGTTTGTGATGAAGTGATAGAAATTGAATGGTACAGGTTCAACTACATGGCTGTATCAGA TGACAGGAGAAGAATGATGCCAACAATGAAAGATAGAGAAACTGGTCAAATTCTTGCTTACCCTGAAGCTGTTCGTTTAA CCAAACCAACCAACCCAGAATTCAGAGGAGAGGTATGTACCAATTTACACGCTTGTTTAATTTGAAAAAGAGGCTTTTGG CTTATTCTTTCCTTTTCTACTGACTAGGCTTTTGGTTTAGCGGACAGTCGGACACATTCGAATACACTCATTATAATTGG TTTATTTTATGAAAAATCAATACATTTCTCTCATTTTTTAAGCAATATATTGAATTGAATTCTTAAGAAATAAATCAATC ACAATGAGTGTGTTAAAATGTGTCCTTTAAAAAATGTGTCGGTAGCAAAAGAGGCTTTTGGCTTACTGTTTGTTTTGCTA GCTAGTGACATGCAGGCTTCTAGTGTTAAATGCCCGTGAATGAATAATTGTTATGTTGGGTTCAGGTGGATGATAAATAT CAATACTCATGTGAGAACACAGACAACGGTGTTCACGGATGGATTAGTACTCTTGATTCTGATGATGATGATGCACCCAC CATGGGTTTCTGGATGATAACACCAAGTAACGAGTTCCGCAATGCTGGCCCAATCAAGCAAGATCTTACTTCTCATGTTG GCCCCATCACACTCTCTGTATGTCCCTACACCTTGTCTAAATCAATACAAGCAGAAAACACATTCACAGATAAAATCAAA ATAAAATACAAATATAAGAACAACACAATTCCCAATTTCAATAGGGTAGAGTTCAGTTTGACAATGGTGCATGCAATCTA TTTTCAGTGCAGCCACTCTGATCCGGGAATCTCGGCTATTGGATGAATTAGATGGTTGAGATGAGATTCTGAAAACATGT TTTACATAAAATTTATTCTATTGAAATCAGAATCGTTCAATCTTCAGCTGTAACCCAAACTTGTGATGGGTGCACAAAAA AATGACTTTAGCTAAGTGCCTTATGAAAATGCGCACATTGGACCCACACTAGCCTTAAGTTGAGTCCTTATATTTTTGTT ACAAACACATTAGAGAAATGCTAGAAACACGGTCTTTTAATTAGCTCCTCAACACTTCCTGTAATTGATCAATTTTTTAA AAAAATTCTACATATGTTTGTAAAACTACGACAAATATGTTGTTTTTTAAAAAATAGACTAATAAAACACAAGTATGGAA TGGAATGGAAGTATGTGTTAAAATTCAAAAAAATGTGTTGGTGACAGAACACTATTGTTAACACAAGAAGCACTACCCCA TAACCAACATATGCATACATACAATTACATTTCCCCCTAATCTGTATACTTGTTTATTGTTTAGATGTTTGTGAGCACTC ACTATGCTGGGAAGGAGGTAACCATGGCATTTCAAGAAGGTGAAACTTATAAGAAGGTTTTTGGCCCTGTATTTGTGTAC CTTAACTCTGCTTCAATCGATGATGATGATGATACACTATCCCTCTGGTCAGATGCTAACCAGCAGGTACTACTAGTTAT TCCTAATAGAAGCACGTTGTGCTTGTTTATCACACATTATTAATGCTTATGGCATGACTCAATTTGATTTTGTTGTTTAT CCAAAATTAGTTATCCATTGAAGTCCAGAGCTGGCCTTATGATTTCCCTCAATCACAAGATTTCTTTCCACCCAGTCAAC GAGGAGCAGTAACAGGAAGATTGCTAGTCCAAGATTGGTAAATTTTAATGCCTTGTGCTGCCACATTTTAAACTTCAATT TTTTACATGTATGATTCCCTTTTAAACAAGATGTTGGATTCGAGTATTGTGTATGAGATTAACCCCGCTTTTACAGCTAG TTCCATGAGGATGTGGATGTTCCTGCCTTGACCAGAATTACGTCTGATGTTGGTTATATGTTAATATGTTCTCACACAAA AAAAAAACAGCTAATGTTTTTCCTTTCCCCTGTTTGATCAGGTCAATTAAAGGAGGGAGATATCAATATTCTGACAATGC GTATGTTGGTCTAGCTTTGCCTGGAGAAGCAGGATCATGGCAGAAAGAAAGCAAGGTACATTCGTTGTTGTTCGAGCCCC AGGAAACTTATTTATGAGTTATGATATATACACATATTTTCACTTTTTTCCAACTTCATTTTTTATCTATTTCTCTTTTA TCTATCAATATCACCTATCACATCTTTACTTTCTCTCTCATTTCTTCCTATCTCTCTCTTCCTCCACCTCTCCACACCTC ATTTTATGAGGTGTGAAGATATAATTATTCCTTATTTATAGCATGTTTGGATTAGTTTCAAAATTAATTATGACATCCAA AAGTTATTCACTGAAAATGATTCTAGTTTTGAAATCCATTTTGTAGACTAATTTCCAAATATGTACTTAATTTCATGAGT TTTGGATCGTGAGGCAGCTAAAATGGGTTGAATTTTTTGTAACATTCACAGGGCTATCAGTTCTGGACTCGACCTGACAC TAATGGATACTTCACAATAAATAATGTTGTGCCAGGTGATTATAATTTGTATGCTTGGGTCCCTGGCTTCATTGGTGATT ACAAACGTAATGCTACAATCACCATCACACCAGGTAAATTATCTTTTACTCTCTTGTTGGTTTGGTCTAAAACTAGTAAT AACTTAGTGAATTCAACAACTTACAATTACTTGATTGAACCTGTAGGTGAAATAATCAATTTGAGTTACGTAGTATATAA TCCTCCAAGAAATGGACCAACAATTTGGGAAATTGGTATCCCAGATCGCTCAGCTGCTGAATTTCATGTACCAGACCCTT ACCCTATGCTCATGAACAAATTATACACCGAAAAACGCAAAGACAAGTAATTCAAAAACCCATTATGAACAATTGCTTTT CTTCTGTTAATTAGTCTGTGAAATCTTTTTTTTTTTTAATTTGTTATCACATCCTTTTAATTATTCAAAGTATCTTTACT TTTGACAGGCTTAGGCAATATGGGTTGTGGGAGCGTTACACCGATTTGTATCCTAGAGATGACCTTGTTTACATTGTTGG TGATAGCAAGTATAGAAAGGATTGGTTTTATGCTCAAGTTACAAGGTAATTAAATTTTGTTGTTGAGAATGATGGTTAAT TTTTAGATGTTTGATTTTTTTAGTCTAAATTGCCCTTTAATTTGTGCAGACACATGGGAAATGAAACGTATGAGCCAACA ACATGGCAGATTATATTTGAACATCGTAAAGACATATTTATCGGAAACTACACACTCCAAGTGGCTCTGGCTAGTGCTTC TGATGCTGAACTACAGGTATACCATTTCGTTCAATTGTATTATTTGTATAATTCAAGTAAAAAGGGAGGTTTTTTTTCCT TTTCTTTCTATCCCTCTTATCTTAAAACTATTGATCTACTTAGGATGAGATTATGATTATATATATCATTAGGTAAGTTG GATAACTCATTCTTTTAACATTTAGTCTCTCAAACCGTTTGTACAGACACCTCACATGTATTTTAAATTTTAATAAATAG ATCTTCTCAATTGTAATGTTAAGTTTCACCATCTCACAATTATTGATTTTTGTGTTTTTTATAATTAAGGAAATATAAGA AAATTAATTTGATGGTAAGATGGTGAAAATTGACATGGTCATTTATCTTACAATTGATTGAGGATTACTCAATTTTTCTC TGTACATATATCTCTTATCATATATTTACATCTTTCTCTTCCTTTCTGACCTGAGTATCTACACGACTGCACCCATTGAA TACCTATCCAACATTTTCCTTCTTTCAACACAAGTGATATTTTCTATAGTAGTTATTTTAGCTGACATTTCTAAATGAAT GTTCATATATATCAGGTCCGGTTCAATGACCCTAGCATAAATCCACCCCACTTTACAACAGGGCACATAGGAGGTGACAG TGCTATAGCAAGACATGGCATCCATGGATTGCATAGGCTGTTCAGCATTGATGTACCAAGTAATCTTCTTATGAAGGGAA AGAACACCATCTATCTGAGGCAGTCAAGAGCCAAAAATGCTTTCCAAGGAGTTATGTATGATTATATCCGTTTGGAAAGA CCTCCAAATCCAAACACTTGATTTTGTCCGACCTTTATTTGACACAGTAAATATGTGTTGTTAGAAATATAAAAAAAAAA ATCTTATAATATCTTAATCTTATTATTTTAGAGTATTTTATAATATCCGAGTTTTATCTTAGAGTACTTAAGGTATTTTA AATTACTTCTTATATTGATTTGTTTTCTTATTGAATTATTTAATTAAAATTAAGATTCTACCCATTATTTAAAAATATGG GTAAGGATTTTATCTTTTAATCAAATCAATCATTGAATATATATGCC
CDS sequence (LotjaGi4g1v0173000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATGGTGGATAAGAAAAGCAAACGATTTTTCTTCCTTTGGTGGTTTGGTATAACTGTGCAGCTCTGTTTCTTGCT CTGTTCCTGTGCTGAGAAGACATCATTAAGAAACCAATTATTTCCATGCATTCCGTTCATCTGCAGAAGAGGTTTAAAGG ACATCAGCAGCACAAAATCAACATCTATTCATTCTGGACTCAATCTTAATACAGATAACCATCAGCAGTTGGTGGTTGAT AATGGCATTGTTTCCGTCACTTTGTCAAGACCTGAGGGGTACGTCATTGGAATATCTTATAATGAAATTGACAACATCCT TGAAACTGAAAACGAAGAAAAAGATAGAGGGTACTTTGACGTCGTTTGGAATGAGCCAGGGAAAGCTAGTAGCTTTCAGA GAATCCATGGGACAAATTTTTCTGTTATAGCAGCTGATGGTGATTCCGTAGAGGTTTCATTTCTAAAGACATGGACATCG AGTGATTCAGATGTTCCCATAAACATAGACATAAGATACATTTTTCGAAGTGGAGATTCAGGATTTTATTCGTACTTAAT ATTCGATCGCCCTGAAGGATGGCCAGCTGTGGAGGTTGATCAAGTTAGGTTTGTTTACAAACTCAAGAAAGATAGGTTCA ACTACATGGCTGTATCAGATGACAGGAGAAGAATGATGCCAACAATGAAAGATAGAGAAACTGGTCAAATTCTTGCTTAC CCTGAAGCTGTTCGTTTAACCAAACCAACCAACCCAGAATTCAGAGGAGAGGTGGATGATAAATATCAATACTCATGTGA GAACACAGACAACGGTGTTCACGGATGGATTAGTACTCTTGATTCTGATGATGATGATGCACCCACCATGGGTTTCTGGA TGATAACACCAAGTAACGAGTTCCGCAATGCTGGCCCAATCAAGCAAGATCTTACTTCTCATGTTGGCCCCATCACACTC TCTATGTTTGTGAGCACTCACTATGCTGGGAAGGAGGTAACCATGGCATTTCAAGAAGGTGAAACTTATAAGAAGGTTTT TGGCCCTGTATTTGTGTACCTTAACTCTGCTTCAATCGATGATGATGATGATACACTATCCCTCTGGTCAGATGCTAACC AGCAGTTATCCATTGAAGTCCAGAGCTGGCCTTATGATTTCCCTCAATCACAAGATTTCTTTCCACCCAGTCAACGAGGA GCAGTAACAGGAAGATTGCTAGTCCAAGATTGGTCAATTAAAGGAGGGAGATATCAATATTCTGACAATGCGTATGTTGG TCTAGCTTTGCCTGGAGAAGCAGGATCATGGCAGAAAGAAAGCAAGGGCTATCAGTTCTGGACTCGACCTGACACTAATG GATACTTCACAATAAATAATGTTGTGCCAGGTGATTATAATTTGTATGCTTGGGTCCCTGGCTTCATTGGTGATTACAAA CGTAATGCTACAATCACCATCACACCAGGTGAAATAATCAATTTGAGTTACGTAGTATATAATCCTCCAAGAAATGGACC AACAATTTGGGAAATTGGTATCCCAGATCGCTCAGCTGCTGAATTTCATGTACCAGACCCTTACCCTATGCTCATGAACA AATTATACACCGAAAAACGCAAAGACAAGCTTAGGCAATATGGGTTGTGGGAGCGTTACACCGATTTGTATCCTAGAGAT GACCTTGTTTACATTGTTGGTGATAGCAAGTATAGAAAGGATTGGTTTTATGCTCAAGTTACAAGACACATGGGAAATGA AACGTATGAGCCAACAACATGGCAGATTATATTTGAACATCGTAAAGACATATTTATCGGAAACTACACACTCCAAGTGG CTCTGGCTAGTGCTTCTGATGCTGAACTACAGGTCCGGTTCAATGACCCTAGCATAAATCCACCCCACTTTACAACAGGG CACATAGGAGGTGACAGTGCTATAGCAAGACATGGCATCCATGGATTGCATAGGCTGTTCAGCATTGATGTACCAAGTAA TCTTCTTATGAAGGGAAAGAACACCATCTATCTGAGGCAGTCAAGAGCCAAAAATGCTTTCCAAGGAGTTATGTATGATT ATATCCGTTTGGAAAGACCTCCAAATCCAAACACTTGA
Protein sequence (LotjaGi4g1v0173000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMVDKKSKRFFFLWWFGITVQLCFLLCSCAEKTSLRNQLFPCIPFICRRGLKDISSTKSTSIHSGLNLNTDNHQQLVVD NGIVSVTLSRPEGYVIGISYNEIDNILETENEEKDRGYFDVVWNEPGKASSFQRIHGTNFSVIAADGDSVEVSFLKTWTS SDSDVPINIDIRYIFRSGDSGFYSYLIFDRPEGWPAVEVDQVRFVYKLKKDRFNYMAVSDDRRRMMPTMKDRETGQILAY PEAVRLTKPTNPEFRGEVDDKYQYSCENTDNGVHGWISTLDSDDDDAPTMGFWMITPSNEFRNAGPIKQDLTSHVGPITL SMFVSTHYAGKEVTMAFQEGETYKKVFGPVFVYLNSASIDDDDDTLSLWSDANQQLSIEVQSWPYDFPQSQDFFPPSQRG AVTGRLLVQDWSIKGGRYQYSDNAYVGLALPGEAGSWQKESKGYQFWTRPDTNGYFTINNVVPGDYNLYAWVPGFIGDYK RNATITITPGEIINLSYVVYNPPRNGPTIWEIGIPDRSAAEFHVPDPYPMLMNKLYTEKRKDKLRQYGLWERYTDLYPRD DLVYIVGDSKYRKDWFYAQVTRHMGNETYEPTTWQIIFEHRKDIFIGNYTLQVALASASDAELQVRFNDPSINPPHFTTG HIGGDSAIARHGIHGLHRLFSIDVPSNLLMKGKNTIYLRQSRAKNAFQGVMYDYIRLERPPNPNT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 10 | 10 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| ProSiteProfiles | 1 | 30 | 30 | 7.0 | – | |
| Phobius | 11 | 26 | 16 | - | – | |
| TMHMM | 12 | 31 | 20 | - | – | |
| Phobius | 27 | 30 | 4 | - | – | |
| Phobius | 31 | 705 | 675 | - | – | |
| PANTHER | 64 | 701 | 638 | 0.0 | – | |
| PANTHER | 64 | 701 | 638 | 0.0 | – | |
| Pfam | 66 | 258 | 193 | 6.3E-75 | ||
| CDD | 70 | 363 | 294 | 5.43757E-73 | – | |
| SUPERFAMILY | 71 | 369 | 299 | 1.44E-7 | ||
| SUPERFAMILY | 394 | 498 | 105 | 4.12E-11 | ||
| CDD | 398 | 495 | 98 | 2.76108E-32 | ||
| Pfam | 422 | 494 | 73 | 1.4E-26 | ||
| SUPERFAMILY | 505 | 698 | 194 | 1.87E-44 | ||
| Pfam | 508 | 697 | 190 | 1.4E-49 | ||
| CDD | 510 | 698 | 189 | 1.14812E-47 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi4g1v0173000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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