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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0191000 |
| Transcript ID | LotjaGi4g1v0191000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151R3B5|A0A151R3B5_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi4g1v0191000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:43720590..43726033) extracted from Lotus japonicus Gifu genome v1.2.
AAAGGTTTCAAAGTGTGAAAACGAAAGGTCAAAATAATAAAAATAAAAATAAAAAATGAATTGACTCATTCGAAAGGAAT AGACTCACTCACTCACTCACTCAACACTCCTCATAAAATGAGACGCAAAAACGGAAACAAAAGCGTGATCACGTAACAAA CCAAGATAGCTTCTCTCATAATTCTTCTCCTTCTTCTACCATTCTCTGTAACCGCTTCCTCACCAATGGCCACCATGGAG TCTCTCATAGCCCTAGTCAACCGAATTCAGCGAGTCTGCACCGCCCTCGGCGACCACGGCGGCGACGACTCTTCTCTGCC TACTCTCTGGGAGTCGCTTCCTTCCATTGCCGTCGTCGGCGGCCAGGTTCGCCGTTCTCGTTCACATTCTAGATAGTTCT CGCTTTTCGTTAACTCTAATTGTGTTGTTTTGCAACATGCAGAGTTCTGGAAAGTCCTCCGTGTTGGAGAGCATCGTCGG CCGTGATTTTCTTCCCAGGGGATCAGGTTGGTTCACTGTTTGCTGAGAAAACTGTGGAAATTGAAATTTCTTTGATTTTG TTTTTTCAATTTTTGCTTTTAGTTCTGTGTCAATTATCATTGGTTGAATTGAAGAATGAAATTGAAGGATGAATTGAACG GTGAATGGAAAAAAATTATGTGAAATTTATTCATCTCACTGACATTATACATTTGATGTGGTTTTTAGGGATTGTGACGC GGAGGCCTTTGGTACTGCAGTTGCACAAGACAGAAGAGGGATTACAAGACTATGCTGAATTTCTGCACTTGCCTGAGAGA CGGTTTACCGATTTCTGTATGTCATCATCATATTTGGTTCTGAATCTCCATTTGTAGATTGTGGAATTGAGAGTTCCTTG ATTACAGTACATTTTCTGCATGCTCACTCCTTCTTTGAAATGTACTGTTTAGTATGATATAGTCTAGTGTAGTTTCTGTG GCCTCATTTATGTGTGTAGAATTTAACTTTTCCATCTTTCTTTTTCGGCATTGCCTTTTGATTTTAGTCTGCTTGCTTAA CTTCAATTCATTCACAATATGTTATTGTTGTAGCCTCTATTAGGCTTCCGGCATTTATGCCATTTCCCCATTGCGCCGTC TGGCCAAGTCTTAAAAAGTTCATTTGATGTTTTCCGAAGTATTGTGATGACTAATGACATGAGTAATCATGTGTTTGGCT GTGTTGAGTATTTCATATTTGATGTTTGACAAAGGTTATCTTGTTGTAGGGCACAGATTCTTAGGTTGTCTCAACTCAAG TGATGTAATAGTAATACTGCTGTTATTTATTTTTTAGTAATTGTTATTCATGTTGAAACCGGTGGAAACTTTTAGTATAT GGTTTATGCCAACTATTTTCTTAGGATGCTTACTCTGAAAGAGATGAGTAATATATATTTGCTAATCTGTATGATTTATT TCTTTTCTAGATTTTTTTTTAGTCAACTTGTTGTTTGATTTCTTATTATCTTTTGTAGCTCTGGTTCGAAAGGAAATTGA AGATGAAACTGATAAAATAACTGGGACATCAAATCAAATATCCCCTGTTCCTATTCATCTCAGCATCTACTCCCCAAACG GTAAGGAGTTTATGTTTTACATTTCATTCAGGTGTCATTTATCCCTTAGTTCAGATTCTTTTTATCTCATTATTCTAGGA CATAGCTTTCTAGTAGGAAAATGCTTTTGTTGTTTTTATGAAACATAATATAATATGTCGAACTACGATAGATATTTACT TGCTTGAAGAAAATGCATGATCAGTCCTTTCCACTTTTACATGTGCCTTGAAAAACTTGGCAGTGTCTATCTATATTTGC GCTATTTATTTCTCTCTTTGATGTCTTTTTTATTTTTAGTAACTAAGCTGAGTGTCTTGCTTATCAATTATGGGCGATTC AGTGTTTCATGAGAATATGCACTATCCTTTTCAGGCAAGAAGTTAGATTATCAGGAATGACCCAATATAATGTTTTAAGG GAGTTGACAGCCTCTAATATTGTTGTATATATATGAATTCCTTTCAGCGTTGGAGAGGTTGCTCTTTGTATGTAGATTGT GGATTTTCCTTTTTGTCTTGTGAGATTCAAGTTCAACTGATTAATTTTTTTATGGTTGATAGTTGTCAATCTAACATTGA TAGATCTGCCGGGTTTGACAAATGTTGCTGTAGGTACGATTTCTTTTCATTCCTTCTTGTCAAATAAGCATGTAATTCAT ATTATCAATTTTTTTCCTATTTTTGATTTAGTAAGTTGAACATTTTTTATTTTGTCAGAGGGGCAGCCAGAAAGTATTGT TCGAGACATTGAAAACATGATTCGCTCATATGTTGAGAAGGTACTTAAAAGATGTACTTTTATGTTCACTGCTACAGAAA GAATTCTTTCTTGGTTCTTGTCTGAAATCTGATGTTTTGGGTTTACTGTCATTCAGTAGAATACAGAGAAGGTCATTCCA AACTAATGGGAATGACTGAGCGCGACCTCCTACTCCAACATTCTACTTAAACACTTTCTGCTTTTCAACCTTCCAATTAA TTCCTCATTTTACAGAATTTTACTTTGATGCACTTCAGTTAACCACACTTTTAACTCTTCTATGAATCGATTCATTATTT TTTTCCCTTGTGTATTGCAGCCTAATTGCTTAATTTTGGCCATTACTCCTGCAAATCAAGATGTTGCAACATCAGCTGCC ATCATGGTTTCCAGACAAGTTGACCCTGCAGGTATGGTTGCTGCATTTAATTTACAATTATCTTCAACTATACAAACCAT TTTCATTTGTTTTCTTATTATGCTATTATGGTTTATCACTTTATCTTGACAGTGCGTTCGAAATGTTTTCTCTTCAGGTG AAAGAACATTTGGTGTGTTGACAAAGCTTGATTTGATGGACAGAGGAACAAATGCTTTGGATGTAAGAATCTTTGCTTAT TTTGGCGATGAAACTTAATGGACACGGATACAAATGGTTTTCGTATATCGTTCATAATGTTCTCATTTTGACCGTGGTGT AGGTCCTTGAGGGAAGGGCATTTAGACTTAAAAACCCTTGGGTGGGAATCGTAAACCGTTCTCAGGCAGATATTAATAGC AATGTGGATATGATTGCTGCTCGGCAGAGAGAGCGTGAATTTTTTGTCAACAATCCTGATTACGCACATTTGGCTAGCAG AATGGGCTCGGAATATCTAGCAAAGCTTCTCTCAAAGGTTTGTATTTATCCTACTATTATGAAGTTGTGGCCGTGGGCAT GATTTTCTTTGGCTATTGCAACTCTCCTTAGGGCTACTTGATTACTTATAGAACTGGTTGGGTTTCAGCATTTGGAGTCT GTGATAAGAGCTCGAATTCCTGGGATCGTATCATTTATTAATAGAAACATTGATGATCTTGAAGCAGAGTTGTCACGCCT TGGTAGATCAGTTGCTGTTGATGCTGGGGTGAGGAGAATCTTGTTGCTCTATACTATCAATATAAGCGAAAATAATTCCT ATATATTCAGCACACTTCCTCTGATTTTGTCAGGCCCAGCTGTACACTATTCTAGAATTATGCCGAGCTTTTGACCGGGT ATTTAACGAGCATTTGGATGGAGGGTAAGATATTTTTTGTTTGAGGACATGCAATTTTTACCTGTGCGTTGTTTCTGTTT AAACTGCCAGCCATAAATATCAGTTCAATCCTAATTTTTAATATATTTATAGTTATATGCCTTTTATTTATCTTATTTTT CTTTCTATTTCTTTATATTCTTATCATATTACAACTCATTACCCTTTTCATTTATTCCTCTCACAGGCGATCAGGTGGCG ACCGGATTTTCGCAGTTTTTTATTACCAGCTTCCTGCTGCATTGAGAAAGCTTCCTCTGGACCGTCATTTGTCATTGCCA AATGTGAGAAAAGTTATTTCAGAGGCAGATGGGTACCAACCTCATTTAATCGCACCAGAGCAAGGTTACCGGCGCCTCCT AGAGAGCTCACTTAGTTTTTTCAAAGGTCCAGCACAAGCCTCAGTGGATGCTGTAAGTGCTTTAAATATTGGAAGTCAGC ATTTCCGAGTTTTTTCTTCTTTTTAATCTTGTTTAATGCTGTCTTTGAGAGCAACTTTAATCCTTATGTCTTAATTGCTA TGCCATATGTGGCAGGTTCACTTCGTCTTGAAGGAACTTGTGAGAAAGTCAATTGGAGAAACGCAGGTTTGAGTTGAGCA AGAGTTTTTCTTTTTAGTTTTTTTTTTTTGGGGTTTGTATTTTGGTTTTCCATTTATAATGGTTTGCTCATGTACCTTGA ATTCCATTAAAAATCATCTGAATTTTACAAAAGATAATCCAAATGTACACTAACTTTCTAGAAGATATGTGTTGTTAGCT AATTTTGACAAAGTTGCAGGAACTGAGGCGGTTTCCAACTCTTCAAGCTGAAATAGCAGCAGCTGCTAACGAGGCGTTAG AGAGATTCCGCGAAGATAGTAAGAAGACAACATTACGACTAGTGGAAATGGAATCTTCTTATATCACCGTTGATTTCTTC CGTAAGCTCCCTCAGGAACTCGATAAGGGAGGAAATCCAGCTCCCTCCTCCGCGGACCGCTACCCCGAGGGACACTTCCA GAGGATCGGTTCAAATGTTTTATCTTATATTGGGATGGTGTCTGACACGTTGAAGAATACTATTCCTAAGGCCGTGGTGT ATTGTCAAGTGAGGGAAGCTAAGCGATCTCTACTAGACAATTTTTACACTCAGCTGGGGAGAAAGGAGGTAATACATAAA TATGAATCATCCTGCTTTAGAGGGAAACATAAGATATAATAGCTGAACTATACTAAATAGTTACAATAATCAAAACACAA ACATATTGGAAAGAAAAAAAGGGCAGTGGAAAGACAGAAATTTGCTCATTGTTTGGACTCATTTTTGCTGTTTATTTTTC AGGGAAGGCAACTCGCGCAGTTGCTGGATGAAGATACTGTGTTGATGGAAAGAAGACAGAATCGTACCCAGATGCTTGAA TTGTATATGTCTGCAAGGAATGAGATTGATGCGGTTCATTGGTCGCAGGATGCGATTAATCCGGAGTGAACATGAAGAGA ATTTTAGTAGGAAAATATTACAATGATATAGCTTTATTTGAGAGGCTATTGGCAGCTCTGTTTATTGGTTTTTTCTGCAT AGTGTGACGTCTGATTCAGATTGAGTTCACAACCATGGTGGAATAGGCATTTTACTGAAAAGTTTGTTTTAGCTGATTTC TCAAAGGCCCCAAATGGAAATTATTCATTTTTTGTTCAATACTTTCAACATTTGCTTCTCACTTTTTAGCTTGAAAGTAT GAAGCGATAAAGCTACGGGAGTAAGATTCATGTTTGTACTTCGATTAGAGCCGCTCCAATTGAGAACCAATTTTTTTGTG GAGG
CDS sequence (LotjaGi4g1v0191000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACCATGGAGTCTCTCATAGCCCTAGTCAACCGAATTCAGCGAGTCTGCACCGCCCTCGGCGACCACGGCGGCGA CGACTCTTCTCTGCCTACTCTCTGGGAGTCGCTTCCTTCCATTGCCGTCGTCGGCGGCCAGAGTTCTGGAAAGTCCTCCG TGTTGGAGAGCATCGTCGGCCGTGATTTTCTTCCCAGGGGATCAGGGATTGTGACGCGGAGGCCTTTGGTACTGCAGTTG CACAAGACAGAAGAGGGATTACAAGACTATGCTGAATTTCTGCACTTGCCTGAGAGACGGTTTACCGATTTCTCTCTGGT TCGAAAGGAAATTGAAGATGAAACTGATAAAATAACTGGGACATCAAATCAAATATCCCCTGTTCCTATTCATCTCAGCA TCTACTCCCCAAACGTTGTCAATCTAACATTGATAGATCTGCCGGGTTTGACAAATGTTGCTGTAGAGGGGCAGCCAGAA AGTATTGTTCGAGACATTGAAAACATGATTCGCTCATATGTTGAGAAGCCTAATTGCTTAATTTTGGCCATTACTCCTGC AAATCAAGATGTTGCAACATCAGCTGCCATCATGGTTTCCAGACAAGTTGACCCTGCAGGTGAAAGAACATTTGGTGTGT TGACAAAGCTTGATTTGATGGACAGAGGAACAAATGCTTTGGATGTCCTTGAGGGAAGGGCATTTAGACTTAAAAACCCT TGGGTGGGAATCGTAAACCGTTCTCAGGCAGATATTAATAGCAATGTGGATATGATTGCTGCTCGGCAGAGAGAGCGTGA ATTTTTTGTCAACAATCCTGATTACGCACATTTGGCTAGCAGAATGGGCTCGGAATATCTAGCAAAGCTTCTCTCAAAGC ATTTGGAGTCTGTGATAAGAGCTCGAATTCCTGGGATCGTATCATTTATTAATAGAAACATTGATGATCTTGAAGCAGAG TTGTCACGCCTTGGTAGATCAGTTGCTGTTGATGCTGGGGCCCAGCTGTACACTATTCTAGAATTATGCCGAGCTTTTGA CCGGGTATTTAACGAGCATTTGGATGGAGGGCGATCAGGTGGCGACCGGATTTTCGCAGTTTTTTATTACCAGCTTCCTG CTGCATTGAGAAAGCTTCCTCTGGACCGTCATTTGTCATTGCCAAATGTGAGAAAAGTTATTTCAGAGGCAGATGGGTAC CAACCTCATTTAATCGCACCAGAGCAAGGTTACCGGCGCCTCCTAGAGAGCTCACTTAGTTTTTTCAAAGGTCCAGCACA AGCCTCAGTGGATGCTGTTCACTTCGTCTTGAAGGAACTTGTGAGAAAGTCAATTGGAGAAACGCAGGAACTGAGGCGGT TTCCAACTCTTCAAGCTGAAATAGCAGCAGCTGCTAACGAGGCGTTAGAGAGATTCCGCGAAGATAGTAAGAAGACAACA TTACGACTAGTGGAAATGGAATCTTCTTATATCACCGTTGATTTCTTCCGTAAGCTCCCTCAGGAACTCGATAAGGGAGG AAATCCAGCTCCCTCCTCCGCGGACCGCTACCCCGAGGGACACTTCCAGAGGATCGGTTCAAATGTTTTATCTTATATTG GGATGGTGTCTGACACGTTGAAGAATACTATTCCTAAGGCCGTGGTGTATTGTCAAGTGAGGGAAGCTAAGCGATCTCTA CTAGACAATTTTTACACTCAGCTGGGGAGAAAGGAGGGAAGGCAACTCGCGCAGTTGCTGGATGAAGATACTGTGTTGAT GGAAAGAAGACAGAATCGTACCCAGATGCTTGAATTGTATATGTCTGCAAGGAATGAGATTGATGCGGTTCATTGGTCGC AGGATGCGATTAATCCGGAGTGA
Protein sequence (LotjaGi4g1v0191000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATMESLIALVNRIQRVCTALGDHGGDDSSLPTLWESLPSIAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQL HKTEEGLQDYAEFLHLPERRFTDFSLVRKEIEDETDKITGTSNQISPVPIHLSIYSPNVVNLTLIDLPGLTNVAVEGQPE SIVRDIENMIRSYVEKPNCLILAITPANQDVATSAAIMVSRQVDPAGERTFGVLTKLDLMDRGTNALDVLEGRAFRLKNP WVGIVNRSQADINSNVDMIAARQREREFFVNNPDYAHLASRMGSEYLAKLLSKHLESVIRARIPGIVSFINRNIDDLEAE LSRLGRSVAVDAGAQLYTILELCRAFDRVFNEHLDGGRSGGDRIFAVFYYQLPAALRKLPLDRHLSLPNVRKVISEADGY QPHLIAPEQGYRRLLESSLSFFKGPAQASVDAVHFVLKELVRKSIGETQELRRFPTLQAEIAAAANEALERFREDSKKTT LRLVEMESSYITVDFFRKLPQELDKGGNPAPSSADRYPEGHFQRIGSNVLSYIGMVSDTLKNTIPKAVVYCQVREAKRSL LDNFYTQLGRKEGRQLAQLLDEDTVLMERRQNRTQMLELYMSARNEIDAVHWSQDAINPE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 614 | 614 | 0.0 | ||
| PANTHER | 1 | 614 | 614 | 0.0 | – | |
| SMART | 4 | 255 | 252 | 4.1E-108 | ||
| Gene3D | 5 | 323 | 319 | 5.8E-114 | – | |
| SUPERFAMILY | 33 | 311 | 279 | 2.38E-72 | ||
| ProSiteProfiles | 35 | 304 | 270 | 55.047 | ||
| CDD | 37 | 304 | 268 | 1.85576E-126 | ||
| PRINTS | 38 | 56 | 19 | 2.2E-57 | ||
| Pfam | 41 | 216 | 176 | 1.0E-51 | ||
| PRINTS | 63 | 80 | 18 | 2.2E-57 | ||
| ProSitePatterns | 64 | 73 | 10 | - | ||
| PRINTS | 136 | 153 | 18 | 2.2E-57 | ||
| PRINTS | 186 | 204 | 19 | 2.2E-57 | ||
| PRINTS | 205 | 221 | 17 | 2.2E-57 | ||
| Pfam | 226 | 493 | 268 | 1.1E-57 | ||
| PRINTS | 228 | 247 | 20 | 2.2E-57 | ||
| Coils | 307 | 327 | 21 | - | – | |
| Gene3D | 330 | 581 | 252 | 1.6E-50 | – | |
| SMART | 517 | 610 | 94 | 1.3E-27 | ||
| Pfam | 520 | 610 | 91 | 9.3E-22 | ||
| ProSiteProfiles | 522 | 615 | 94 | 16.896 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0191000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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