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LotjaGi4g1v0316600.1

Overview

Field Value
Gene ID LotjaGi4g1v0316600
Transcript ID LotjaGi4g1v0316600.1
Lotus japonicus genome version Gifu v1.2
Description chromatin remodeling 1; TAIR: AT1G48310.1 chromatin remodeling factor18; Swiss-Prot: sp|Q9NZC9|SMAL1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; TrEMBL-Plants: tr|K7LZ63|K7LZ63_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0316600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:69402609..69411308) extracted from Lotus japonicus Gifu genome v1.2.

TGATTCTCTTGTCATTCATTTCTATTTCTATTGTACTACTACAAATTTAAAAAACTTTCCCAAATACCAAATAGCAAGTT GCATCTTGTAACCTACCATGTCAACAACACAAAACTGAAGAGTGTTCTGCTCACCAAATTCAAAACAGAAAAACAAAAAC ACACAAGGAAGAAAAAGAAGCAGGTTTGAATTTCTGTGAATTCATAATAGAGAGAAGAAGAGAAGATAGAGGTTGTTTGC ATTGTACAGTATGGAAACAGAGGATTGGGACTTGAGCGCTGAAGACCTTGATTCCCTCGAACGTGACGCTTTCCAGAAGA TTGCTCAACTGCGCCACGCTCCTTCTTCTTCCCAACAACCGCATTCTGCAACTCACCACTCGGAGCGACACCCACCAAAC CCTCTTCCCGATTCACGTCCTCAAAGGGTAAAGTTAGAATCTTTTTTGGTTTTCTATTTCATTGCTGTTTTCCATTTTAT ATGGGTCATGGGTTAAATTCATCATGATGAATTTTTGTTCTTTTTTCCTGTTAAGTGTGTGTTTATTGCTTTTCTCATTC AATTTTTTTTTTTTTTGTGTGCTATAGTTTCTAGTATTCTGCTATTTTGTAAAGAGCATTGTTTTGTTTCTTAGTTTTAT TGTTGCAATTCCAGGTTGATGCTTTGTCTCAACAAGGAGCTAGAGTACTTCCCACGTCAGTGAATTTGAAAGCAGGAACA GCAAACAATGGTGTGGTTTTCATTGACTTAGTCACCTTTCTTTATCCATCTTTTGTAAATTTGTTCCCAGCATTGTTTGT CTTAGGGAGTGCTATGTAATTGTAGACTTTATATCGATTTTTGTTCCCGGCTTTTCCTCCTCTTTTTTTATTCTATTGTT GTAATTTTGTTCTGGTTTTCATTTTATCAAATTTTGATATGTTGGCTTTTATTTTGTGTACATGGCTTTCTGTGTAAGCA GATGAACACGCAAAAGAACGGTCGAAGATTATGGTCAAATTTTTCCTTCATTCTAGTGGAAGCATCGCCGCAAGGTTTCA ATATGACCAGGTTTTATTTGCTAACCACTTGTAGAGTGTTGAGTTTTATTCAATTTTGGCTCTTCCTTAAATTAGGTTTT TTCTTTGGTGATATTCGGGCTCATGATAAGGACTTTGTTTTGCATCAGGTAGTAGTTGCTGCTTTCCGGAGAATACCTAA ATCTTTTTGGAATGCAAAGGAGCGGTATGTTTTTCCACCCTTCCTCCATTGTGTTTTGCTATTGCTAGTGCATTATTTCT CTAGATTGGCTGCTTTGCAGCCTTAGCAGTTAGCCTCATAAAAACCTTGTGTCTGCAGGTTATGGATGTTTCCACTATCT TCTTTATCAGAAGCAGAAAGGGTTCTTGGAGAATTATCTGGTCATAATGTTCAGGTAATAGCTTCTTCTATTTTTTATTT CCTTTGGAGCTTATAAGTTGGTGTTAGTTTACTATTTGCCACCATATGATAAATAACCTTAGCATAGTCCAACTTCATTT TCTTGTTGGATTTGTTACCTTGAGGGAGAGCCTGCCGACACAATAAGATTGTTGTCAGTGTCTTGTGATCTAGTGTGGAT AGGGCCGTGCACTTTGTTCTTTTTATAGGAACAACCACAACCACTCCACTTCATGTAATTGATCTGTTAATTTTTTTTGG CCGGAGGGAAACAATAGCTTTCACGAGCTTCAACTCTTTACTTTGGAGATAAAAGGAAATGATATATTTGCTCGTCCTGA ATCATAGTTGCCTTTTTTTATTTATAATTTTATACATGTGTTAAAGATACTTTCCCCCCTTCTGTCTCTTGCCTCTTCCA CATTTTTGTTTTCTTCCCCCGATACACTAACACTGTATATGCACACTTTGATGTTCTAAGATTCGTATGGAGATAGGTCT TAAAAAAGGAAAAAATCATATCTGGATAATAAGATTAAGTGCAACGATTACTGATTCATATATTTTTATTTCTGCTGTCC TAGAGTCAGGGCTTGTGCCAGACTTTTGTGCTTACATTTGTGATTTTTATCTGGATTATATGGTTCCTTAATTTCTATAT ATTTTAGCTTTCTTCCTAGTTCCTAATGCAATTTTCTAAATTATTGTACAGGTGGAAAACTTAGATCCCTTAGTGCAGCG GGCCATTACTGCTGCATCTGCTGTTCCAGATCTTCAAGGTACATGCTGATTGCTGAATGTTTTGATTATCAGGATTTTTG TTTCCTTCTCTCTAGACCTGCAAATGATTTAGGCATCTATCTTTTCCCCAAAAAATTCTGAAGTTTCTATTTTTTGCTGC CTTTACTGAAAGGTCGATACGACAAGATCCCTAGCGATGTTGAATCAAAGCTTTTGCCATTTCAGCGAGAAGGTGTTAGG TATACTCACCTTTCTCCCACCATTCTTGTATGATATGGATGAGTTATTGTGGTTTATCTTCCATGTCTTTCCTTCCTAAC TTGTTCTTCTACTATGCCTTGATTTTAGTCGTTATTTATTTGTTTTCAGGTTTATATTGCAGCATGGAGGTCGTGCTCTT TTAGCTGATGAAATGGGACTTGGGAAAACTTTGCAGGCAATTCACTGTCTAAAACTAAATTATTTGCATACTTCAACTGT GCAACATGTGTAGAAGCATTTTATTTCTTGATGAACGAACAAAAATACAATTGTTTGTAGCTGTAGATGTATGGCCTTCT CAGAATTTCTGCTTATACACAGCCTTGTAAATTTTGTTATGTTTTTCTTCCTTCTGCAATCAATTTTTTTTATTAACCCA TGGTGGAAATCATACTTATTTGATGCTACCCCTGAACCATTGATGTGGTCATGTATTCAGGCCAAAATCCTGCTGCTTGC TCAGTTACCTCATTATTCTCGTAAAATTTTGGAAATTTCTATCAATTTTGATGACTGATTATGAATATCTTATATCATAA TCTGAGCTGAAAGTAGACGGTAAATATTAAAATCGTTAAGATACATGTAGGCATCAGCTCCATGTTCTAAATACATATAC ATATTTGATGTATGACTCTTTTCGTGAAGTTGTGACTACTGACTAGATACTCTCTTTTTAACAAATTGTCCCTGTAAGTT TTTAAATTGATCAAATTGTCTGTGTGTGTGTGTGTACATGATAAATCACGACAGTAGATAAATAGAATTTATTATGCCTG CTTGGGAGAAGGGGAAAGTAGGATAATGGTGGGAGTGAAACCTATTGATCATTAGTGAACTTTTGCTGTGGTTAATCTCC TTTCTGCCTTTCTCTCTTTCCCCTTCTTCCTTGGGAAAGAAAAGTGAGGAATAATTATTCTTGTGGAGTACCACATCACT GATTTATTGAATGTATAATTTTTCTTGGTTTTTGTAGGCCATTGCTGTAGCTGCATGCGTTCAGGACTCGTGGCCGGTTC TTATAATTGCACCTTCTTCATTACGCTTGCAATGGGCTTCTGTAAGGGTTGTAATTGTACATTTTTCATCATTTGTTATA ATACACTTGATAACATATGTGCTTATTGTTTTGCCTTAGATGATTCAACAATGGCTGAATATTCCTTCATCAGATATAGT TGTATGTAATCATTGATCCCTTCATTAATTTTTTTTAGTTTGTTCTGTTTTGGTTTGTATAGACGGACTTTTCTTTTTTG GTTGCTTTAAGTTCTTTCTAATATAATATTAATTTTCTTCTACTTATGTTGAGTAGATTGTCTTATCTCAAAATGGTGGA TCAAATAGAGGAGGATTCAACATAGTATCTTCTAGTGCCAAAGGAAGCATTCATCTGGATGGGCTATTCAATATTATCTC ATATGATTTGGTGCCAAAGCTACAGAATATGCTTATCGCATCCGACTTTAAGGTTAGCGCCATCCACTTACCTAATTTTT CCCCCATGATGGTCTTTTCCCTTATAGTATAATCTTTAAAAAATGAAAATGGATTGAGAAAGTGGCCAACACTAACTTTT GGCATTTCAGTTATTTTATTAACTATTAATGAGCCATGTGCTGTACAATCAGAGCTGTCCCTGAAGTAATGACTGGGTCT ATATTTACCTGTGTCCTTTGCAAAAACAGTTCCAGTTATTGCTGATAAATCATACTCTTAGCTGTGAACTATTTTTATTC AGGTTGTCATTGCAGATGAATCACACTTTCTGAAAAATGCTCAGGCGAAGAGGACTACTGCTTCTCTGCCAGTTTTAAAG GTATTCACTCTTGGAAGTCACAATGACATGCTTGCGGTTGGTCTGGGTATATTACCTCTAAAGTAAGCTCATGTTTAATA AACATAGAAAATATGTAAGGAGAAGATAAAACAAGAAGAGAGAGAAATAAATGGATATTTAACGAAAGAAAAAATAAAGT CATGGTGTGTGCAGGATTTTGGGTGTCTAGCACTCTGGACCCTGCTTGCCCTCCTCTGAAAAGGAACTCTGGTTTTATAT GTAAAGGATTTTCATTGGTGTATGTTTTAGCTTGATTATTAGTTGAGTACTTGAGTTACAGTATAGACTGCTAGCTACAG TGCAGAGTAATCTCTCTTTATCCAATTCCGTCATGCTTTTGTTCACTGTAAAACTAAGTGTGACAATGTCAGAATGCTCA ATATGCAATATTGCTTAGTGGAACTCCTGCTTTATCCCGACCGATTGAACTATACAAGCAGGTAACTTATTTTTGTGTAT TTTGGTCTAATACCTCATTAATGTTTGACCTTGTTGGCATCTACATTTTGATAATCTGTTTGAAATTGTGCTGCAGCTGG AAGCTTTGTATCCTGAAGTATATAGGAATGTTCATGACTATGGTAACCGGTATTGCAAGGGTGTAAGTCCTCTCATATTC GCTACATATAGGATTCATTTAAAGCCATTTTTCCTTTTGCAGCTGATGGATGAGTATTTCAACTAACCATTAACGCATTA ATCTTCCAGGGAATTTTTGGAATTTATCAAGGTGCAAGTAACCATGAAGAATTGCACAATTTGATGAAAGCAACAGTGAT GATTCGCAGGCTTAAAAAGGATGTTCTTACTGAACTTCCTGTAAAGCGTAGGCAACAAGTGTGTACATTTATCGCCATTT GTCTCTGCAATCTGTTAATGTTCTGCACGCTTTTTTCGGTTTATGTATGAAAGTATGAAACTATGAATGCACACAGCTTA TTGATGGAAGTTTAGAGTTAATTATTGTCTTTGTTTTGCAATTGATTCTTAGGTCTTCCTAGACTTGGCTGACAAGGACA TGAAGCAAATTAATGCTTTATTTCGTGAGGTAATTCAGCAGATTTGTTGTAGGCCTTGAGATGACGATAGCATCATCCAG TTTTATTATAACTATAGGTCTAAAGCTAGTTATGGAATGCAGTTGCTAGGCATATTGGCAATTTTTTAGCTTATTTTTTG ACAACATTTTTTGAGTTGCATTATATTAGATTGTTCAATTCCAAACCAAGTAAAATTGACTTAATTTACGCTATTTAATG AATGTTCATATCATGAGTATTTTGTTTTTCTCACTTTTGAATAAATGAATAGTAGTCTTACTTCTGAAGTCTGTTGTAAA TTTGCTCAACAATTTTGTCTAGAACAGTGGTGGTAGTTTCTTTACCAAGAATAGGTAATTTTGCTTGGGAGTAATAATAT TTATGTCTTGGAGTTTGAGGTGGTAAAACTGCTCTATGATTGTTGCTTTGCAGTTGGAGATGGTTAAAGCCAAAATTAAG GCATCAAACTCAAAAGAGGAGGTTGAATCACTGAAGTTTACTCAAAAGCACCTTATTAACAAGGTATGGATGGAAGAAGG TGTAGTTTGCACAAATTTGTTTGAGATATTGTTACTATTTCCGAGAACTAGAAGAGCTTTATAGTTCACTGCAATGCCCG GTCATGCTCAGTATACTGGCAATTTGAATTATTATAACTTGTTTTGTTACTAAACTCTGAATCTCTATTCATATAATTCC AGATATATACTGAGTCTGCAGAAGCCAAGATTCCATCGGTTCTGGATTATGTGGGAACTGTCATTGAGGTATGCCTCACC TCAACATCAACTGAAGATTAATACTTCCAACTGCGGCAAGCCTGCCACCTTATTAACTGAAAATGCGTTAAGATCTGTTT TTAGCATTCTCAATCATCTATTTTTTCTTTTTAGAATGTGCTTGCATGTATGCATGTCTATTTTGTTATCAAATACTATT CAATATGTTTAATGTCAGTTGAATTTGTCATTTTCTGTTACTTTTAGTACAAATTGTGCCCCTTAATGCTGACTGTAAGT TGAATGAATTGACTGAATATTTTAGTAAATTTTTGACTGTGAACTAAATATAATGGAGCTTCCATGTCCAGTCATCTCAT GAGTTATAACCTTGATTCTACAAGAAGATATAAAATACCATTGTGTTATACCTTCTTAATTTTGATACTTTCAAGCTTCG ATATGCAGCGTTTGTTTGACTTGATCCTTGCTTTTTCTTGTAGTTAAAATTGCGCAGTTTAGCATCATAGCATGTGGTAA TGCTAGATTTGTCATGATTCTTGCAGGCAGGTTGCAAGTTTCTTATCTTTGCACATCATCAACCAATGGTTGAGGCCATA CATGAGTTTCTTCTTGTAAGGCCACTTAACTTTTATAAATCTTATCATGAAATGATAAACACTTATGGGAACTGTTAAAA ATTTCCAGAAGAAAAAAGTGGGCTGCATCCGGATTGATGGAGGTACACCAGCTGCATCAAGGCAACACTTGGTTACAGAG TTTCAGGAAAAAGATGCTATCAAGGCAGCAGTGGTATGGTAATTTCATTCATGTGTCTAGTAGTTATTTTTCTTTTCTCT CGATTGAGCTCTTGGCTTGTTTCATCTGTAGTTTTGGTGTAAAATATGGTTCAATTCTGATATAATGGTTTCCTGTTCCT TGTACTGTCTTGCAGCTATCTATTAAAGCTGGAGGCTTTGGGTTGACTTTAACTGCTGCCAGCACAGTCATTTTTGCAGA ATTATCTTGGACTCCAGGTGACCTAATTCAGGCAGAAGACCGTGCTCATAGAATCGGCCAGGTAAAGATAAAGGGAGAGA TCTAAATATCATTTAAATAAAAAACAATCCGCAATTATAAAATGGTACTAGCTCTTGGGAATTCGAGTGAGAGTTTTGAG TCCTGCATTGGTTAATAATGAGGAAGATAAAAGTAATATAAGAGAACAGACCCATATACCCAATTCTTTAAGATTCTAGG TTGAAATCTGGTGTCAGTAGGTCTCCTTGCTTTCTGGGCTCTTCATGTCACCCCAGCACTAGCACATTAACACTAAGAAA ATGAAGCAACCTCGGAAAAAAATATGATAGATTATCTTGTCAAAGAAAAGATCTGTCATTGCTAAACCTTTTTTTTTAGT AGAAGAGGTTAATCTATACTCTGATGGTTCTTTAACTTTCTAGTTCTTGTTTTCAGGTATCTTCAGTAAATATATACTAC TTGCTAGCAAATGACACAGTTGATGACATCATATGGTAGGTTTTGTATTTTTCTTAGTCCTCTAAGGTTTGGTAATTGGT AATGACTTGACGTCTTTGATGCATTGATAATCTCATTTTTTTCAATTCTTAGGGACGTAGTGCAAAGCAAACTGGAAAAT TTGGGGCAGGTAAATCTATTTTTTGGCATCATATTTACTGCAAAATGAAAGATGTTGTAAATTCAGTTTCCATATGGTAA AATGATATGGACATTCGATTCTGATATTTACCTCAGAATCTATATATATATATATGAGGAGGGATACATTGACTCCGAGA GTCAATCTTATCGGAAAATATTTCTACCTTTTAGAGAATATTTACCTCAAGTAGTCTTTGATACTTCGTATTGATTTTTT AGAAGCATTCTGAATTTTTATTTTGTTATCGGAAAATCAGATGTTAGATGGCCATGAGAACACCTTAGAGGTCTCAGCTG GCCAGCCAGTGAGTAGCCCTGCAAAACAGAAAACTCTTGATCAGTTTGTTAGAAGATGTGGCAACATGGAACATCAGTCC AGCCCGAAACGTGCCCGACAATGACCTGAAATTCATGTGGTATAAGTAAACCCATTCTTGCTCCTGCACAACTGCTGGCT GAGTAATTAGGATCATGTCTTAAAAGTTCTGTGAGCAGGTTTACTTCTACTTGGAGAACATGTAGAATGTTGCAGTGTTA TCATTGTCCAGAAGCTTCCGTATGACATTTCTTTTTCATTTGGACAGCAGGTGCTTAAAATGGACAATGGTTGCATGTTG ACACATTCTTGCTCATCCCATGTAAAGGGCTTATAAAGTAGAGGGTGTAGTTAAACTCTGTTGACAAGAGGTCATATAAA ATAGGTTGTCTGAACAGCTTGCAACTCTAAACTATTTTGCTGGTACTGGAGGAGGTGATCGGTTACTGTACTGCGTATTC GATGAAAATGGCGATCAAGTCTACAACAGTTTTTAGGGTTCTTTTACTCCTTCCTTAACGTCTTGTCCCCTTAAGTTTTG TTCTCTGTGGGACCTGTACAGAATACATTATCATATGAATGTAACATATAAGTTGCTCTCCTAAATACAAAATTTCATAT TTCATCCATTTATGCTATTTACTTTTCTAGTTCTTCTACGGAGGATTTAACATATCCAAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0316600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAACAGAGGATTGGGACTTGAGCGCTGAAGACCTTGATTCCCTCGAACGTGACGCTTTCCAGAAGATTGCTCAACT GCGCCACGCTCCTTCTTCTTCCCAACAACCGCATTCTGCAACTCACCACTCGGAGCGACACCCACCAAACCCTCTTCCCG ATTCACGTCCTCAAAGGGTTGATGCTTTGTCTCAACAAGGAGCTAGAGTACTTCCCACGTCAGTGAATTTGAAAGCAGGA ACAGCAAACAATGATGAACACGCAAAAGAACGGTCGAAGATTATGGTCAAATTTTTCCTTCATTCTAGTGGAAGCATCGC CGCAAGGTTTCAATATGACCAGGTAGTAGTTGCTGCTTTCCGGAGAATACCTAAATCTTTTTGGAATGCAAAGGAGCGGT TATGGATGTTTCCACTATCTTCTTTATCAGAAGCAGAAAGGGTTCTTGGAGAATTATCTGGTCATAATGTTCAGGTGGAA AACTTAGATCCCTTAGTGCAGCGGGCCATTACTGCTGCATCTGCTGTTCCAGATCTTCAAGGTCGATACGACAAGATCCC TAGCGATGTTGAATCAAAGCTTTTGCCATTTCAGCGAGAAGGTGTTAGGTTTATATTGCAGCATGGAGGTCGTGCTCTTT TAGCTGATGAAATGGGACTTGGGAAAACTTTGCAGGCCATTGCTGTAGCTGCATGCGTTCAGGACTCGTGGCCGGTTCTT ATAATTGCACCTTCTTCATTACGCTTGCAATGGGCTTCTATGATTCAACAATGGCTGAATATTCCTTCATCAGATATAGT TATTGTCTTATCTCAAAATGGTGGATCAAATAGAGGAGGATTCAACATAGTATCTTCTAGTGCCAAAGGAAGCATTCATC TGGATGGGCTATTCAATATTATCTCATATGATTTGGTGCCAAAGCTACAGAATATGCTTATCGCATCCGACTTTAAGGTT GTCATTGCAGATGAATCACACTTTCTGAAAAATGCTCAGGCGAAGAGGACTACTGCTTCTCTGCCAGTTTTAAAGAATGC TCAATATGCAATATTGCTTAGTGGAACTCCTGCTTTATCCCGACCGATTGAACTATACAAGCAGCTGGAAGCTTTGTATC CTGAAGTATATAGGAATGTTCATGACTATGGTAACCGGTATTGCAAGGGTGGAATTTTTGGAATTTATCAAGGTGCAAGT AACCATGAAGAATTGCACAATTTGATGAAAGCAACAGTGATGATTCGCAGGCTTAAAAAGGATGTTCTTACTGAACTTCC TGTAAAGCGTAGGCAACAAGTCTTCCTAGACTTGGCTGACAAGGACATGAAGCAAATTAATGCTTTATTTCGTGAGTTGG AGATGGTTAAAGCCAAAATTAAGGCATCAAACTCAAAAGAGGAGGTTGAATCACTGAAGTTTACTCAAAAGCACCTTATT AACAAGATATATACTGAGTCTGCAGAAGCCAAGATTCCATCGGTTCTGGATTATGTGGGAACTGTCATTGAGGCAGGTTG CAAGTTTCTTATCTTTGCACATCATCAACCAATGGTTGAGGCCATACATGAGTTTCTTCTTAAGAAAAAAGTGGGCTGCA TCCGGATTGATGGAGGTACACCAGCTGCATCAAGGCAACACTTGGTTACAGAGTTTCAGGAAAAAGATGCTATCAAGGCA GCAGTGCTATCTATTAAAGCTGGAGGCTTTGGGTTGACTTTAACTGCTGCCAGCACAGTCATTTTTGCAGAATTATCTTG GACTCCAGGTGACCTAATTCAGGCAGAAGACCGTGCTCATAGAATCGGCCAGGTATCTTCAGTAAATATATACTACTTGC TAGCAAATGACACAGTTGATGACATCATATGGGACGTAGTGCAAAGCAAACTGGAAAATTTGGGGCAGATGTTAGATGGC CATGAGAACACCTTAGAGGTCTCAGCTGGCCAGCCAGTGAGTAGCCCTGCAAAACAGAAAACTCTTGATCAGTTTGTTAG AAGATGTGGCAACATGGAACATCAGTCCAGCCCGAAACGTGCCCGACAATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0316600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

METEDWDLSAEDLDSLERDAFQKIAQLRHAPSSSQQPHSATHHSERHPPNPLPDSRPQRVDALSQQGARVLPTSVNLKAG TANNDEHAKERSKIMVKFFLHSSGSIAARFQYDQVVVAAFRRIPKSFWNAKERLWMFPLSSLSEAERVLGELSGHNVQVE NLDPLVQRAITAASAVPDLQGRYDKIPSDVESKLLPFQREGVRFILQHGGRALLADEMGLGKTLQAIAVAACVQDSWPVL IIAPSSLRLQWASMIQQWLNIPSSDIVIVLSQNGGSNRGGFNIVSSSAKGSIHLDGLFNIISYDLVPKLQNMLIASDFKV VIADESHFLKNAQAKRTTASLPVLKNAQYAILLSGTPALSRPIELYKQLEALYPEVYRNVHDYGNRYCKGGIFGIYQGAS NHEELHNLMKATVMIRRLKKDVLTELPVKRRQQVFLDLADKDMKQINALFRELEMVKAKIKASNSKEEVESLKFTQKHLI NKIYTESAEAKIPSVLDYVGTVIEAGCKFLIFAHHQPMVEAIHEFLLKKKVGCIRIDGGTPAASRQHLVTEFQEKDAIKA AVLSIKAGGFGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDG HENTLEVSAGQPVSSPAKQKTLDQFVRRCGNMEHQSSPKRARQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45766:SF3
9 676 668 6.0E-278
IPR030101
PANTHER
PTHR45766
9 676 668 6.0E-278 –
MobiDBLite
mobidb-lite
19 64 46 - –
ProSiteProfiles
PS51467
90 164 75 12.392
IPR010003
Gene3D
G3DSA:3.40.50.10810
167 441 275 9.0E-43
IPR038718
SUPERFAMILY
SSF52540
177 417 241 2.02E-36
IPR027417
SMART
SM00487
190 383 194 3.8E-16
IPR014001
CDD
cd18010
194 417 224 1.58681E-105 –
ProSiteProfiles
PS51192
203 375 173 16.633
IPR014001
Pfam
PF00176
212 476 265 1.6E-28
IPR000330
SUPERFAMILY
SSF52540
316 646 331 7.6E-45
IPR027417
Gene3D
G3DSA:3.40.50.300
459 679 221 7.7E-44 –
CDD
cd18793
490 614 125 4.67307E-46 –
ProSiteProfiles
PS51194
494 646 153 13.726
IPR001650
Pfam
PF00271
503 603 101 1.3E-13
IPR001650
SMART
SM00490
520 603 84 2.1E-17
IPR001650

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006281
Biological process DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
Subterm of
GO:0031297
Biological process Replication fork processing The process in which a DNA replication fork that has stalled is restored to a functional state and replication is restarted. The stalling may be due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes.
Subterm of
GO:0036310
Molecular function Annealing helicase activity Catalysis of the ATP-dependent rewinding of single-stranded DNA (ssDNA) to reform base pairs between strands. Often acts on ssDNA bubbles bound by replication protein A (RPA).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0316600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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