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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0322900 |
| Transcript ID | LotjaGi4g1v0322900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase, putative; TAIR: AT3G42880.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9M1L7|PRK3_ARATH Pollen receptor-like kinase 3; TrEMBL-Plants: tr|G7JS80|G7JS80_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi4g1v0322900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:70103795..70107309) extracted from Lotus japonicus Gifu genome v1.2.
ATTTGACCTGAAATGGAGCTGACCCGGTCAACACAATTTTTGAGTTGCAGAAATATCGGAATCATTTGAAGGAGCCATGA ATGTGTTAACTATTCTTAGCATGCATGGTAATTCTGGAACTCCATTCTCCATCATCAAACCATGTCAACCTTTGGCTACC CAAATCCAACAAAACTAAATCCATCCAAAAAACCACTTTCACTCAGGGAACAACCTCATTCTCTCCGACGAGCAGCGGTC CATTTCTACCCAGCCGCAATAACTTTCCGGCTCGGCAATGGCCGCTGTTCGCCGCCGTCTCTCTCTCCTCCTCCTCCTCA CCCTCTTCACCTCCCTCTCCCCCACCTTCTCCGCCAACGAGAACCAAGCCCTCCTCAAGCTCAAGCAATCCTTCATCAAC CCCAAGTCCCTCTCCTCCTGGGTTCCCAACCAGAACCCCTGTTCTTCCAAGTGGGTCGGTGTCATCTGCTTCAACAACAT CATCTCCAGCCTCCACCTCACCGATTTAGACCTCTCCGGCACGATCGACATCGAAGCTCTCATGCAGATTCCCACCCTCC GAACCATCAGCTTCGCCAACAACTCCTTCTCCGGCCCAATGCCGGAGTTCAACAAACTCGGTGCCCTCAAAGCTATCTAC CTCTCGCAGAACCAATTCTCAGGGCCAATCCCTGCAGATTTCTTCTCCCACTTAGCTTCCCTGAAGAAAATCTGGATTTC CAACAACAAATTCTCCGGCAACATCCCTGACTCGTTAACCAAGCTTCGTTTCCTCTCGGAACTCCACCTCGAGAACAACG AGTTTACAGGCTCTGTTCCTGAGCTGAAACAGGACATCAAATCACTAGACATGTCGAACAACAAGCTACAAGGCGCAATC CCCGCCGGAATGTCGCAGTACGGCGCGAAATCATTCTCCGGCAACGAAGGGCTCTGCGGGAAGCCGCTTGACAACGAGTG CGACCCGTCTTTGACACCGTCTGGAACAGGGCAAGGAGGGTTCACCTGGGTGATGAAGATCATCGCGATGCTCTTCATTG TGGCGGTGATGATGGTGGTGTTCATGTTCGTGAAGTCTCGGCGTGCCCGGGATGATGATTTCAGCGTGATGAGTAGGGAG AATCTGGACGAGGTTGTGCAGGTGCACGTACCGAGTTCGAACCATAGCAGGGCTTCGGAGATTAGCAAGAAGGAATCATC GAAGAGAGGGTCGTCGAGGAACGGGATGGGTGATCTTATCATGGTGAATGACGAGAAGGGTGTGTTTGGTTTGCCGGATT TGATGAAGGCTGCGGCGGAGGTTTTGGGGAACGGTGGATTGGGTTCGGCTTACAAGGCTGCCATGTCGAATGGATTGTCT GTGGTGGTGAAGAGGATGAGGGAGATGAACAAAGCGAGCAGAGACATCTTTGATGCTGAGATGAGAAGGTTTGGGAGGCT TAGGAATCGCAATATCATGACTCCTTTGGCTTACCATTACCGCAGGGAGGAAAAGTTGTTTGTCACTGAGTACATGCCCA AAGGAAGCTTGTTATATGTTTTGCACGGTATCATATCATATTATCAAAACTTTTCCCTCTATTTCTTCCCTAGTTATGTT CATTGTTCATCTCCTTATGAAGTTTGATTTCTTGTGCCTGAAATGCTCTTGTATGATGAACTTTTCAAAACAAAATGCAC TGATAGGTATAATTGGTGGAGGGTATGAAAGTGGGGTATGCAGTTAGCTTCACATATGGATATTCAGATCACCTTATTTT TACTGAATCAATTCTGTTGCTCAGAAGTTATAGTGCATGTTTGAAAATCATTCTACAATTGATTCTAAAGCCTTTGGAAT TGATTTTGAGAAAATAGAAACTTATCCAAACATGCTATTAGTAGAAGCTTATCCCAAAAATTGATTCGGGCTTTAGAATC AATTATGACCAAGCTAAATGTTAACATACCAGTATGTGGGGTTCTGCATTTCCAGTTCTAAATAGTGTTGCTGTAGATTA CTATGTGCATGTGTAGATATATGGTGAAAAACCACGGTGAGACCAAAATCATGGTGCACAGTTACAAAAGCTAAGGGAAG TTGCTTTTGTCCGCCGTGATTTTCCTCCGTGTATTCAAACTTTAACTTGTTGTCTTGTTCAATCTGATTTAGTTTTACAT TCACAAAACCAAAATGAAGCCTGATCATGATTCCCTTTTAGTCTTTCCTTTAGATCCTTGTGTTTTCATTTGGTGGAAAT GATGTGTCACTTGATGTTTTTTCAGGTGATAGAGGGACTAGTCATGCTGAGCTGAACTGGCCTACCCGTTTGAAGATTGT GAAGGGAATTGCAAGAGGGTTAGGCTTTCTCTATACTGAATTTTCTGCTGAAGACCTGCCCCATGGAAACCTCAAATCCA GCAATGTTCTGCTAGATGACAGTTACGAGCCTCTCTTAGGTGACTTTGCCTTTCACCCCCTTATCAACCAGAGCTATGCC GTGCAGACAATGTTTGCCTACAAAACTCCCGATTTCATGCTGTACCAGCAAATTTCGCAGAAGACCGATGTTTACTGCCT CGGAATCATCATTCTTGAAATCATCACTGGGAAGTTCCCTTCTCAGTATCACAGCAACGGCAAGGGTGGGACTGATGTGG TGCAATGGGTCTTCACAGCGATTTCCGAGAGAAGAGAGGCAGAATTGATTGATCCAGAGTTGGCAACGAGCAATAATGCG AACTCAATGGGTCAAATGTTGCAACTTCTCCAAATTGGGGCTGCTTGCACGGAGAGCAACCCCGAACAAAGACTTAACAT GAAGGAAGCCATTAGGAGGATAGAGGAGGTACAGGTTTAAAGATCATGTCAATATGCTAGCTTAGTGCAAGTTGCTTTTT TAGGGGAGATTACAGGCCTAGGAAAGATTACAATATTCAGCATCTTGATCCAACACTTCTATTCTGAATGATCTTCGAAA GCGTCGTGGTAAGCAATGAGTATTGCACGTGATGAAAAACAAACATGGGGCCACAATGAACATGTGGAGGAAGAAAAAGA GGTAGAGAGGGAGAAAAGCTTCATGGAAGAGTTCGGTTATACTGAGAACGATGACATGTTGGGTGAGGGCGGGAACATAA TCTCATTACAGTTAACAGAATGAGAGACAGAAACTTAGAAACAATAATTGAGAGATGCTGATGCTTGGAGTGTTTGCCAT GTTTTTCTTGTCCATTTGAAGAGAGGAAAATGTTGAAGTCCAAGCTCAGTTTGAGTGAGTGTGGTGTTGGTGTGCCTCTT TCTGCTGATAAAGGTCCTTGTAAATTTTGTGCAATTCTTGTAAAATAAAAACAAAACCATTTTTGAGACAACATCCCTCA AAATTTACTGCTGAAAAGTTTGTACTAGACGGATTTTCAAGCTTTCCTCTTATGTCTATCAAATCCAAGGGCTGTTTCTC TTTTTGTAGTTTAATTTCTTTTAAAAAATTAGCCAATTCTAGTTGCTCTAAGAAATGCCTTTTGCCTAATGTCCA
CDS sequence (LotjaGi4g1v0322900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCTGTTCGCCGCCGTCTCTCTCTCCTCCTCCTCCTCACCCTCTTCACCTCCCTCTCCCCCACCTTCTCCGCCAA CGAGAACCAAGCCCTCCTCAAGCTCAAGCAATCCTTCATCAACCCCAAGTCCCTCTCCTCCTGGGTTCCCAACCAGAACC CCTGTTCTTCCAAGTGGGTCGGTGTCATCTGCTTCAACAACATCATCTCCAGCCTCCACCTCACCGATTTAGACCTCTCC GGCACGATCGACATCGAAGCTCTCATGCAGATTCCCACCCTCCGAACCATCAGCTTCGCCAACAACTCCTTCTCCGGCCC AATGCCGGAGTTCAACAAACTCGGTGCCCTCAAAGCTATCTACCTCTCGCAGAACCAATTCTCAGGGCCAATCCCTGCAG ATTTCTTCTCCCACTTAGCTTCCCTGAAGAAAATCTGGATTTCCAACAACAAATTCTCCGGCAACATCCCTGACTCGTTA ACCAAGCTTCGTTTCCTCTCGGAACTCCACCTCGAGAACAACGAGTTTACAGGCTCTGTTCCTGAGCTGAAACAGGACAT CAAATCACTAGACATGTCGAACAACAAGCTACAAGGCGCAATCCCCGCCGGAATGTCGCAGTACGGCGCGAAATCATTCT CCGGCAACGAAGGGCTCTGCGGGAAGCCGCTTGACAACGAGTGCGACCCGTCTTTGACACCGTCTGGAACAGGGCAAGGA GGGTTCACCTGGGTGATGAAGATCATCGCGATGCTCTTCATTGTGGCGGTGATGATGGTGGTGTTCATGTTCGTGAAGTC TCGGCGTGCCCGGGATGATGATTTCAGCGTGATGAGTAGGGAGAATCTGGACGAGGTTGTGCAGGTGCACGTACCGAGTT CGAACCATAGCAGGGCTTCGGAGATTAGCAAGAAGGAATCATCGAAGAGAGGGTCGTCGAGGAACGGGATGGGTGATCTT ATCATGGTGAATGACGAGAAGGGTGTGTTTGGTTTGCCGGATTTGATGAAGGCTGCGGCGGAGGTTTTGGGGAACGGTGG ATTGGGTTCGGCTTACAAGGCTGCCATGTCGAATGGATTGTCTGTGGTGGTGAAGAGGATGAGGGAGATGAACAAAGCGA GCAGAGACATCTTTGATGCTGAGATGAGAAGGTTTGGGAGGCTTAGGAATCGCAATATCATGACTCCTTTGGCTTACCAT TACCGCAGGGAGGAAAAGTTGTTTGTCACTGAGTACATGCCCAAAGGAAGCTTGTTATATGTTTTGCACGGTGATAGAGG GACTAGTCATGCTGAGCTGAACTGGCCTACCCGTTTGAAGATTGTGAAGGGAATTGCAAGAGGGTTAGGCTTTCTCTATA CTGAATTTTCTGCTGAAGACCTGCCCCATGGAAACCTCAAATCCAGCAATGTTCTGCTAGATGACAGTTACGAGCCTCTC TTAGGTGACTTTGCCTTTCACCCCCTTATCAACCAGAGCTATGCCGTGCAGACAATGTTTGCCTACAAAACTCCCGATTT CATGCTGTACCAGCAAATTTCGCAGAAGACCGATGTTTACTGCCTCGGAATCATCATTCTTGAAATCATCACTGGGAAGT TCCCTTCTCAGTATCACAGCAACGGCAAGGGTGGGACTGATGTGGTGCAATGGGTCTTCACAGCGATTTCCGAGAGAAGA GAGGCAGAATTGATTGATCCAGAGTTGGCAACGAGCAATAATGCGAACTCAATGGGTCAAATGTTGCAACTTCTCCAAAT TGGGGCTGCTTGCACGGAGAGCAACCCCGAACAAAGACTTAACATGAAGGAAGCCATTAGGAGGATAGAGGAGGTACAGG TTTAA
Protein sequence (LotjaGi4g1v0322900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAVRRRLSLLLLLTLFTSLSPTFSANENQALLKLKQSFINPKSLSSWVPNQNPCSSKWVGVICFNNIISSLHLTDLDLS GTIDIEALMQIPTLRTISFANNSFSGPMPEFNKLGALKAIYLSQNQFSGPIPADFFSHLASLKKIWISNNKFSGNIPDSL TKLRFLSELHLENNEFTGSVPELKQDIKSLDMSNNKLQGAIPAGMSQYGAKSFSGNEGLCGKPLDNECDPSLTPSGTGQG GFTWVMKIIAMLFIVAVMMVVFMFVKSRRARDDDFSVMSRENLDEVVQVHVPSSNHSRASEISKKESSKRGSSRNGMGDL IMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMSNGLSVVVKRMREMNKASRDIFDAEMRRFGRLRNRNIMTPLAYH YRREEKLFVTEYMPKGSLLYVLHGDRGTSHAELNWPTRLKIVKGIARGLGFLYTEFSAEDLPHGNLKSSNVLLDDSYEPL LGDFAFHPLINQSYAVQTMFAYKTPDFMLYQQISQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAISERR EAELIDPELATSNNANSMGQMLQLLQIGAACTESNPEQRLNMKEAIRRIEEVQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 8 | 20 | 13 | - | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Gene3D | 21 | 184 | 164 | 3.4E-35 | ||
| PANTHER | 23 | 613 | 591 | 0.0 | – | |
| PANTHER | 23 | 613 | 591 | 0.0 | – | |
| SUPERFAMILY | 25 | 207 | 183 | 2.62E-30 | – | |
| Phobius | 26 | 243 | 218 | - | – | |
| Pfam | 27 | 64 | 38 | 7.5E-9 | ||
| Gene3D | 185 | 230 | 46 | 4.1E-5 | ||
| TMHMM | 243 | 265 | 23 | - | – | |
| Phobius | 244 | 265 | 22 | - | – | |
| Phobius | 266 | 614 | 349 | - | – | |
| MobiDBLite | 291 | 317 | 27 | - | – | |
| Gene3D | 308 | 412 | 105 | 4.1E-12 | – | |
| ProSiteProfiles | 337 | 614 | 278 | 25.178 | ||
| Pfam | 341 | 607 | 267 | 1.1E-25 | ||
| SUPERFAMILY | 341 | 609 | 269 | 7.79E-47 | ||
| Gene3D | 413 | 614 | 202 | 2.9E-37 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0322900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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