Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0382500 |
| Transcript ID | LotjaGi4g1v0382500.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor 1-alpha, putative; TAIR: AT5G10630.1 Translation elongation factor EF1A/initiation factor IF2gamma family protein; Swiss-Prot: sp|Q5R6Y0|HBS1L_PONAB HBS1-like protein; TrEMBL-Plants: tr|A0A0R0K1F3|A0A0R0K1F3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76120009..76127496) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAATCTACAAGAGCAATCTACTCTACACGGATTGAGGAAAAGGGGGGGAGATCTGAGATGACAATGTTGTCGCAGCC GCACTCCGATTACACTCATTGATTTTCTCTCTCTTCACATCAAAATTCAAAACCCTATTCCCTTTTCCTCTTCGCGATTC CCATTGATTTCCCCTCAAGCTTCACTGTGCATGCTCTCGCTCTGAGACCATGCCTCGTAAAGTAAACTACGGACTCGATT ACTACGAAGACGACGACTATGCCGACTACGACTACGATCTTGACATACAAGAACAACATGGTTAGTTTTACTTTTCAATT TACTTCTATCTGTATCAATTCTCATGTGTTAAATCCTTTTTTCTTTCTTTCTGTAGTAACAGGAGAAGGACCTGATACAA AGCAAGAGACCGTGAGACCTGGACTTTGGCCATGCCCCATTTGCACTTATGACAACGATGACAGTATGACTACCTGCGAT ATTTGTGGTGTTGTACGTCATTCCTTTGTTAACATGGCAACTTCTAACACTATCAAACCAGGTAATTCTGATAGATATGG GAACATGGGACTTGGAATATAAAGTTTATATATTCGTCTAGCTTTACTACAGTGATATGAACAAGTTAATAAGTGGAATC ATATATACTCTATGTTAGATAAGATAAAAACTTATATGAAATTCTGGTTTCTCTATGATGTCTTAGGCCAAGCATGGTGG TAGATGACAAAAATGGAGTTATTGAAATAAAGTTGTAGTTTCAGTGTAAATAATTGACTATCGTGATGCTACGGATATGA TTTCTCAGTGTTTTTGGTCGTTTGTTAGGTAGTTTCCCCTTGCTTTTTTAGTAAATGAGGATAAGGATAAATATTATAAA TTTCACTAAGAAAGGGCACAGCAGGAGGACTAGGAATCCTCAATGGAGGAAAAGCTAGAACAATAATAAAATTAAATAGG CAACGATAATAAGAAAATAAAAGAGGAATTTAATATCTTTGCATATCTGAAAAAAAAAAGAGTGCGGAGGGGGCATCGAA GAATATGAGAACTTGTTTCTGATGAACAGTGCTAAGTTAAGAATGATGGACACGGAATACCTATAACCTGTTGAACAATC TCTTTGATGCAGTTGAAGACATAAGCAAAACTCCTGGAGCATCCAAGTTGGCCAGGTCTCTTTTTCAACCATTACCAAAA CAGATTCCCAAAGAGCTTGAATTATTTCCTAAGCAGGATGATGGTTTTCAGACAGGTGGCAGTGACTTCTACAAGCTTGA GAATGTCCAAGGAGAATTTCATGAAATTCATAAGGCTTTTAACACTCAAAGCCATCCCTATTTAAACATAGGTCTTCACA AGTCTTGATTCAGGATGTTAGAATCGTTTCTTCCATATTTGAGTCTTACATAATAGTAATTAGAATATAAGGTCTTATGA GTTGAGGTTCAGAATTTGTTTAATGACATTCTATGTTTTAGTTCCTGGAACTCCTTGCACATGAGAGCAAACCTTAATTG TTGTTATAAAACTATGTTTTTTCCAATGCACAGATTCTTTCAAGTTTGATGGTCCATCCCCAGATGATGTGGTTTATTCT GGCCTAAGTTCTTCAAAAAAGGGTCTGAAAGGTACCCCTCCCTCAACCAATCTGGTTTGCCTCCTGAGCTTAAGTTAGAG GAAATGTGATTAATTGTTGAGAGCTAGTGACCATTGTTTTGAATCTAAGAACTCATTCTTGCCCTTTCTCTGTGGTTTAC TTTACCAATCATTTTCTAGAACCTCTAAATTATTTTCTTTTTTGGAGAGAGAGAGAGAGAGAGAGAGTACTAGAAAGGAA GTGAAAATTATGAGAGGATAAGAAGCACGTTTTGGTTAGATTTTTAAGGGGAAAATTGCTTTTATTTTTCCTTTCGTCAA AAGTTCTCAGTAAACTTTTGATTATAAATTGTTTTAAATACCAAAAAAACTAATCCAGGCTCTTACAAGTTATCCTCTAA AAGAGAAAACAATGATGAAAGAAGAAAAAACCTTGAACAGGAAAACAGCTTAAAGAGAAAACTTCAAAAAAACTGGAGAC TGAGTAACCAGGACAAGTCAGGAGATGTAGAAACACTACACGGGGGAGAGAGAGAGAGGAAATGGAAGCAAAGGAAAAAC TCAGTTACCATTTGTGCTCTCCCTGACGTGTCTCTGCCTAAATTTTCTGTAACAATGTGTTGTTTCTATTTGCGGACAAC TTTTGGATTGTTTGATGCATTATTTTTCAACGTAGATATGTTAGTATGTTAGAGTATATTATAAATTCTATCATTAAATG CTTGGCATGGTTTTCGTAAGCTGATTAATAAAAAAGAGATAATAACCTGTCTCATGTTTACTAACAATTTGTGCCATCTG TCTTCAAGTTGTATCTTTTCCAGTGTAGCTTCAACCAAAAGATTAAAAAAGAGAACATTTTAGGAGAAAAAAGTTTTTCT TTATTTATTTTCTTCATGTTTTGATTACTTGTGGATAAATTTTAATCCATCTTTTTTTTGTAATGCTTTCAGATAAAGTT GCAAACTCAAAAACTAATCAGCTTTCGTCAAGCAACAGAGAGAAAAATGAACTTTTTGCACAACCAAATGCTGAAAGTTT AGACAACTTATCATCCCTAATGCAAAAGAGCAGGCAGGGAAGTTCAGCTGATAACAAGCTGGCCAAAAATGCAGAAATTG ATTTGGTAACTGGTAAAACTTCAAACAGCTTACAAGCATCTTTGGCAAAAGACAAAGGTGACAATATGAATAAAATAAAT TCTTCGAAAAGGGGTACGATTGATATTCAATCAAGCAAAGAAACATTAGGTAGTTTGTCTGCACTGCCAAAAGTCAAAGA AAGTGATAAGATTAATTTCTCTTCTACCAGAGATGGAAAACCTGAAAGTGTTTCCAGCAGTTTTAACAACATGGTTCTTG ATGTAAAATCTGGAAATTCTGATAGTACTAATTCTAGGGGATCTCGTCCACAAGTCCCTTATAAGCCGGAAAACTGGATG CTCCCTCAGCAATCTTCTAAAGATGCATTGTCTCAGCTGAATCTTGCAATTGTATGACAATGGCTTGTTTTTTTATATGT TCCAAGACTATATTTCTAGGAATTGATGTCTCATAGTTCTTAATTTTTCAATTGTAGGTTGGTCACGTTGATTCTGGAAA ATCTACACTATCTGGTAGGTTATTACATCTATTGGGACGAATTTCCCCAAAAGAAATGCACAAATATGAAAAGGAGGCCA AGTTACAGGTATTTTCATTGTGGCCGTCATTTTTGTACTATGAGCACTTGATGCTTATAATGCATGTGCCAATTTCAGCT CCCCCTTTTTTGTTAAGCAGGGCAAGGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGGGAAAGG GGAATAACGATGACAGTGGCTGTTGCTTATTTTGACACCAAGAAATATCACGTTGTTGTGCTCGACTCCCCTGGCCATAA AGATTTTGTCCCTAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTGCAT TTGAAGCAGGTATGGATGGTAGCAAAGGACAAACAAGGGAGCATGCACAACTTATTAGAAGTTTTGGTGTTGACCAGGTT ATAGTTGCTGTAAATAAGATGGATGCTGTGGGATACTCCGAAAATCGATTTGATTTTATTCGGCAGCAGCTCGGAAGTTT TCTCCGCACATGTGGATTCAAAGAGTCTTCTCTATCATGGATTCCCATGAGTGTGATGGAAAATCAAAATTTGGTAGCAT CCCCTAAGGACACTGATTTTAAAAACTGGTATGTCTCTGAATAATCTAGATGTGTTGATTTCTGTTGGTGGGCAATGACT GGGGTTATGGAATTATGACAGAATCAAAACAGAAAAACCTAGACAGTTTTCCCAATTTCTTTGCGTATAAAATTTTCAAA AAAAAGTATTAGAGTCAAACCAGTAGAGTGAGATTTACTAATATACCTGTGTAGATATAGTGATGACTTGTATTTTACTT ATCTAGTTGTAGTCATTAAGAAATTGAACCAGTAATCATTTTGTATTGAATTTTCTATTCTATTTTGAAATGATCATTGG TTAGTACTAAATGTTGATCGACTAGGATCTACTACAGAAACAATTAGTGACATAGGGGCAGTTTGAGTTTGAGTCTCTCA AAGCTGATTTAGAACTGTTTAAGATAAACTACTCATAAAAAATTAGATTATTTTGTAGCTAGTTGTAAGTTATATCTTAT CCAATATCATCCTAATGGTGACACAGGGATAGTTTGACAACTCAAACTTGTTTAGAACTGTTTAAGATAAACTACTCACC TATATTTTACAGCTAGTTTCAACTTAAACTTGTTTTGGTTAAAACCAACTGAGAGTTGTATACTGCCATAAAACCAATTT TTGAAACACTACTTTCTACTTAGTTATCAAACATCTTATATTTAATAACTGTCTCCATTGCACTCAAATATCACGTTTTC AGAAGTTCCCGAACACCTGAATAGTGTAAATAAAGTTGTTCTTTTCTTTTGAATGGAATTCAAGTAGCATTAGCAGTCAT TGTGTAACTTTGTTATCTCTAGAAAGGCAGAAAGACTTAACTCGACTTACTTGTTACTTTTTCCCTTTTTTCTTTACTTT TTTAATATCCAACCTTGATAGAAATAGCCTTTTGGGACACCCTCGTAATAAATTTGTAAATCCCACCTTACTCTATTTTC CAAGCAGAAAAACTGACATAATAAATTTAATGTCTCATGTATAGCATCTTAAGCCTAGCAGGCTAAGGCTTAGTATGTTC TTGTTGCTACTCTGAAATCCCAATTGAGCAGAAAGAAACTTGGGCCATTATTGTTTTACTAGTATGCTGTCCATTCTCTC CTCAGTTCTCTGGTATCATATGCTCATTAGGAAAGGCCAGTTTACCCCATTCAACTTAAGCTCATGTGCATTTTGGCCCC AATACTTTGAAAATTTTATTTTCTTCCAAGCGCTAATGCAAATCGTTACACCAGAATCATGTGACCATATGTTGTATTAA TTTCTTATTGAGAAAAGTTTGATTTACCGTAATCAAACTTAGGGTCATGTGCACTTTGGTCTTGAAACGTAAGTAAATCA AACGAAAGGAATGGTTGTTTGACAGGAAGTCAAACAAAATGAATTGTATGAAATTTATAGTACTGACAAGAAATGATGTT GTGTTCATTGTGAAACAGGTATAGTGGACCTTATCTATTAGAGGCAATTGACTCGCTCCAACCTCCTATTAGAGAATTCT CAAAACCTCTACTAATGCCAATATGTGATGTTATCAAATCAACTACACTGGGACAGATTTCTGCTTGTGGTAAACTGGAA GCAGGAGCCCTTCGGAGTGGATCAAAGGTATAGAATTTGGTAGAGTTATGGCTATTACTGATAAATTGAATGAAAAATTC ACATTTTTAACTCTCCAAATCACAAGTGTTTTGTGCTGATCTGAAATTAACCGAGTTCTTCTAGGAATTAACAAAGTGGG AGTTTTAGTCTCTACGTTTTTATTGTGTTCCTTACTTTGACAGCATGTTCATTTTAGTCCATTAATTTGCAAATGACATC AAGCTATTTGTTCAATTGCTATCCTAATGGTGAATTTCCATTCAGATTTTTCCATACTGCTGTCCTTTTCAATCTTGTTT CATTTTTGCAGTCTTTGGATGGTTTGTATTGATGTGATTGGAGATGGGGTTTTGTTTATATAGCCTGGAAATTTAATCTT TTTGTATGTATTGGGTTACTGTATGATCGAGTAGTGCATGGAACGAAATCACATACTTAAATTCTTCTTGGACATGATGA AATGAAACTATTCCTTTCTATAACTGTATTTTTTATTTATTGTAGGTCTTAGTTATGCCTTCAGCTGTTGCGGGAACAGT ACGCTCATTGGAGCGTGACTCTAATGTCTGCAATATTGCTAGAGCTGGAGATAACGTAGCCGTAACGTTGCACGGTATTG ATGGAAGTCATGTGATGGCAGGAGATGTACTATGCCATCCTGACTACCCTGTTGCAGTTGCTAAGCATTTGGAGTTGAAA GTGCTTGTCTTGGATGGTGCAAATCCCATATTGGTGGGAGCTCAGGTGTGTAGTACTTTAAATATGACAACATTCTTTGC ACTTTCTTTTCTAACTTCTGTTTGAAAAAAAGGCAAACCTGGTGCCATTAAGCTGCTGTGCTATGTGCGAGGTTCAAGGA GGGGCCGTACCCACGTTGTGGGTCTAATTTAGGCAGCCCTACCTCGCATTTTTGCAAGGGGCTGATTCCACGGCTTGAAT CTGTGACTGAAAAGTCACTTGGCAACAAACTTACCATTGCACCGAGGCTCGCCCTCTTCTAACTTATGTTTATTGGGGAA AAAAATCACTTCTCTTTTTCTATCTGTGCAGTCAGAGTTTCATATACACCATGCAAAGCAACCTGCTAGAGTTTCGAGAA TATTGTCGGTACTTGATCCCAAGACTGGTAAGGTGACCAAAAAGTCCCCTCGCTGTCTCACTGCAAAGCAAAGTGCAGTC ATTGAGGTGAATAAACAAAGCAAAACTTTTCTATTACTCTATTTCAATGATCATCCACGAATTTTTTGTTTTGCCTACAT TGCTAAGGACACAGAAAACATGGAATGACTTTTATTGTCTCTGTTTTTCAGGTGACTTTGCAGGAACCGGTATGTGTTGT AGAGTTCTCTACTTGTAAAGCTCTTGGAAGGGTGTCCCTCAGATCATTAGGAAGAACAATTGCTGTCGGACTTGTAACAA GAATAATTGAAGAACAAGAATAACATGGAAACGTTCTGAGCACACCATGTTTGCTGTTCCAGGAAACATGTTTGTTTGCC ATCTTAGACTAGATTAAGTTATGCTGGCAGACAACCGGAAGCTATGTGACTATTGTTGAGGTTCTTGGGTCAATATGCGA AATATGTAAGCAATAAGAATGGTTAAGTTATTCTATTTTTTTGATGTTAATTTCGCCCCCTGTGTATCATAACTCATAAG AGTGTTCCTCTTCAATAGTCTGGACTTGTGTACTATAGCAATTTTGTTGGAACAGGAAAGCATGCATCCGTTGGATGTAA TTGCTTTTATTTTTTGATAATGCCTAATGTTTAGCATTGATTGATCTGATCTATACATGGATAATCAATATATTTCATGT TTAAATTTTGGGGTTGGAAACCATGAAAAAGTCCCCTCATTTTTCGTGGGAGCTGGGAAAGGCTGTTCTGTACTTAGACA ACCTTAACCGGCTGAGCCGAATAAAATCATTATTGTCCACTTCGAGCCTTTTTATTCTCAAAATGAAACTAAGGAAATTG CATTATAATTGTAAATGTTGATTTCCAAATTTAACGATTCTCGTCAAG
CDS sequence (LotjaGi4g1v0382500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAAAGAGCAGGCAGGGAAGTTCAGCTGATAACAAGCTGGCCAAAAATGCAGAAATTGATTTGGTAACTGGTAAAAC TTCAAACAGCTTACAAGCATCTTTGGCAAAAGACAAAGGTGACAATATGAATAAAATAAATTCTTCGAAAAGGGGTACGA TTGATATTCAATCAAGCAAAGAAACATTAGGTAGTTTGTCTGCACTGCCAAAAGTCAAAGAAAGTGATAAGATTAATTTC TCTTCTACCAGAGATGGAAAACCTGAAAGTGTTTCCAGCAGTTTTAACAACATGGTTCTTGATGTAAAATCTGGAAATTC TGATAGTACTAATTCTAGGGGATCTCGTCCACAAGTCCCTTATAAGCCGGAAAACTGGATGCTCCCTCAGCAATCTTCTA AAGATGCATTGTCTCAGCTGAATCTTGCAATTGTTGGTCACGTTGATTCTGGAAAATCTACACTATCTGGTAGGTTATTA CATCTATTGGGACGAATTTCCCCAAAAGAAATGCACAAATATGAAAAGGAGGCCAAGTTACAGGGCAAGGGATCCTTTGC TTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACGATGACAGTGGCTGTTGCTTATTTTGACA CCAAGAAATATCACGTTGTTGTGCTCGACTCCCCTGGCCATAAAGATTTTGTCCCTAACATGATTTCTGGGGCAACACAA GCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTGCATTTGAAGCAGGTATGGATGGTAGCAAAGGACAAACAAG GGAGCATGCACAACTTATTAGAAGTTTTGGTGTTGACCAGGTTATAGTTGCTGTAAATAAGATGGATGCTGTGGGATACT CCGAAAATCGATTTGATTTTATTCGGCAGCAGCTCGGAAGTTTTCTCCGCACATGTGGATTCAAAGAGTCTTCTCTATCA TGGATTCCCATGAGTGTGATGGAAAATCAAAATTTGGTAGCATCCCCTAAGGACACTGATTTTAAAAACTGGTATAGTGG ACCTTATCTATTAGAGGCAATTGACTCGCTCCAACCTCCTATTAGAGAATTCTCAAAACCTCTACTAATGCCAATATGTG ATGTTATCAAATCAACTACACTGGGACAGATTTCTGCTTGTGGTAAACTGGAAGCAGGAGCCCTTCGGAGTGGATCAAAG GTCTTAGTTATGCCTTCAGCTGTTGCGGGAACAGTACGCTCATTGGAGCGTGACTCTAATGTCTGCAATATTGCTAGAGC TGGAGATAACGTAGCCGTAACGTTGCACGGTATTGATGGAAGTCATGTGATGGCAGGAGATGTACTATGCCATCCTGACT ACCCTGTTGCAGTTGCTAAGCATTTGGAGTTGAAAGTGCTTGTCTTGGATGGTGCAAATCCCATATTGGTGGGAGCTCAG TCAGAGTTTCATATACACCATGCAAAGCAACCTGCTAGAGTTTCGAGAATATTGTCGGTACTTGATCCCAAGACTGGTAA GGTGACCAAAAAGTCCCCTCGCTGTCTCACTGCAAAGCAAAGTGCAGTCATTGAGGTGACTTTGCAGGAACCGGTATGTG TTGTAGAGTTCTCTACTTGTAAAGCTCTTGGAAGGGTGTCCCTCAGATCATTAGGAAGAACAATTGCTGTCGGACTTGTA ACAAGAATAATTGAAGAACAAGAATAA
Protein sequence (LotjaGi4g1v0382500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKSRQGSSADNKLAKNAEIDLVTGKTSNSLQASLAKDKGDNMNKINSSKRGTIDIQSSKETLGSLSALPKVKESDKINF SSTRDGKPESVSSSFNNMVLDVKSGNSDSTNSRGSRPQVPYKPENWMLPQQSSKDALSQLNLAIVGHVDSGKSTLSGRLL HLLGRISPKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQ ADAAILVIDASLGAFEAGMDGSKGQTREHAQLIRSFGVDQVIVAVNKMDAVGYSENRFDFIRQQLGSFLRTCGFKESSLS WIPMSVMENQNLVASPKDTDFKNWYSGPYLLEAIDSLQPPIREFSKPLLMPICDVIKSTTLGQISACGKLEAGALRSGSK VLVMPSAVAGTVRSLERDSNVCNIARAGDNVAVTLHGIDGSHVMAGDVLCHPDYPVAVAKHLELKVLVLDGANPILVGAQ SEFHIHHAKQPARVSRILSVLDPKTGKVTKKSPRCLTAKQSAVIEVTLQEPVCVVEFSTCKALGRVSLRSLGRTIAVGLV TRIIEEQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 59 | 59 | - | – | |
| MobiDBLite | 22 | 37 | 16 | - | – | |
| PANTHER | 50 | 566 | 517 | 9.3E-261 | – | |
| PANTHER | 50 | 566 | 517 | 9.3E-261 | – | |
| MobiDBLite | 100 | 124 | 25 | - | – | |
| MobiDBLite | 100 | 118 | 19 | - | – | |
| Gene3D | 115 | 361 | 247 | 1.6E-81 | – | |
| ProSiteProfiles | 137 | 368 | 232 | 52.973 | ||
| SUPERFAMILY | 139 | 382 | 244 | 2.44E-59 | ||
| Pfam | 140 | 356 | 217 | 5.4E-45 | ||
| PRINTS | 141 | 154 | 14 | 3.9E-20 | ||
| CDD | 141 | 360 | 220 | 5.61273E-121 | – | |
| PRINTS | 200 | 208 | 9 | 3.9E-20 | ||
| PRINTS | 220 | 230 | 11 | 3.9E-20 | ||
| PRINTS | 236 | 247 | 12 | 3.9E-20 | ||
| PRINTS | 281 | 290 | 10 | 3.9E-20 | ||
| SUPERFAMILY | 359 | 455 | 97 | 2.04E-18 | ||
| Gene3D | 365 | 454 | 90 | 1.9E-23 | – | |
| Gene3D | 455 | 565 | 111 | 1.1E-32 | – | |
| CDD | 455 | 563 | 109 | 8.84614E-45 | – | |
| Pfam | 456 | 563 | 108 | 7.3E-17 | ||
| SUPERFAMILY | 460 | 564 | 105 | 2.3E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0382500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…