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LotjaGi4g1v0392500.1

Overview

Field Value
Gene ID LotjaGi4g1v0392500
Transcript ID LotjaGi4g1v0392500.1
Lotus japonicus genome version Gifu v1.2
Description Dual specificity protein phosphatase, putative; TAIR: AT3G55270.1 mitogen-activated protein kinase phosphatase 1; Swiss-Prot: sp|Q9C5S1|MKP1_ARATH Protein-tyrosine-phosphatase MKP1; TrEMBL-Plants: tr|A0A1J7GIS4|A0A1J7GIS4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0392500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:77098626..77103185) extracted from Lotus japonicus Gifu genome v1.2.

AGAAAGATGACTCAACAAAAACCCTAGTGTCCCATTGTCCCTTTCCCCGCATCCGCCACACAACCCTTAACCTAAGTCAC CTTTATACTTCTCTAATCATCTTCTCCTACCATTCTCTCCTCTCATTGAACTCTAAAACCCTCCTGGACCCGTCACTGTC GTTGATTTCTTCATCTGCATCGCTGCGTTGCCTCCTCATTTCTCCTTTGTTGCTTTCCCCGTCGCTGTAGATAAACGAGA CGAAGCACAATCGCAGCTTCTCTTCAATTTTCTCTCAGTTCCCTTGGATCTTGCCTCTTCGACTAGCTCTTAGTTTCCTT GGATCTGGCCACTTTGTTTTGTTGATCATCTTCTTATGGGTTTTGGCTGATGTTGGTCTTCTCCTGGTTTTTAACTATCT CCTCTATTTGGTGATGACCAGAACCACCCAAACCCGCCACCACTATTACCCGAATCCGACACACCCGAAATCAACCATTG GCGGAATCGGTCTTGAATAACTCAGACTCAACCTCGATATGATTTACTTGAACCCGCCCGATGCTCAACCATAATTGCGG TCAACAATAGATACTCTTGTGTCAGTTTTTCTATTTACTACAATACCAATTTTAAGTGAATATTTTCTTTTTTACAGGTT TTGTCTAAATGACTCAAGGAAAAACTTGGGTTAAATCAACCTAATCCTAGTTGTACCAATGATATTTAAGATAAGTGAAA TTTCTAACCACTTATCTTGAATATTATTATTGGTTAACCAAGGGGACTTTTGGTAGAAGGGAACTTTAAACATTCCCAAG TAAGTAAGGTTGGGATGTTACATTCTCATGTTTGGTATAAGTTTTAGAAAAATTATTCTCAGGCATTATGGATTCCCAAA AGACATGCAATTTACCTTGTTTTCTTCGAATTTTATCCTTATGTCTAAGGACGGGTATCTTGCATTTCCATAGGAATGAA AGTTATTTTCCCCTAATTTTTATTTTTATTTCATTTTTTATTTTTAAATATTTTAATTAAATAAATGTTATTAGCATATC CATGAATTGAATTTGTTAACCAAACACATTTTTTATAATGGCCAGACATATAAATCATGTTCTAATATTCCTTGGGAACC TCATACTTAGAAATGATTTTTGATAACTTGTAACAAACGCCCTCTTAGGACTAGTGTGAACTAGCCCAAATTTTTGTATG GCCCCTTAGACAATTTTTTTTATATCTAGTATCAATTTTATATCTTCATTCAATTATGCATGTGAAATATTTAAAACTGT TGACTTCTAACATCACCTTGAATACAATTTAATAACTATAGGATAAAATAATTAAACGTGACAGTAAATACAATTTAAAC TCAAGACCAATTTTTTCCTTTATTTAGCTGGTCAAAATTATAATTGTTACATCATAATATATAAGTAATAAAAAATTATA ACAATAGTTTGACTATGCAAATAAAAAAATATTAAAAAACATTTAAAAATGTAACATGACCTTGAATAACAATTAATAAC AATGCATGCAGACCAAAATACAAAACCAAAATGAATCTCTTCCAGTTTCCCTCATGAGTTTTCTGAATGTACATTACCAT GCCTTTAATACAATAAAGTCTATTAGAATTGCAAGAGAACAAAAGTCAATTTAAAATTTAATTTCAATGTGAATGTCATA AATGAAAATTTAAAAGGTTACCCATTATTATATATTATTATATGATAAATAAAATACATTATTATATGATAAAAATAAAA TATATGATAAATAAAATCCCAGGGTGATGTGTGATTTTGACTCATTTGCTGTTCCTGGTCAAATTGAAAGACCATGACCC GCTATAAAACCGCACCTTTTTTTCCTTCCAAATCAGTTTGCAAACTCTTGTTCACTTGCCTAAACCTCTACACCACCACC CTCTTCTCTAGTACTATATAACCAACCAAATTTGCTGTTCTTCTTCAGCAAAATCCAACACTCTCTACAATCTACATTCA ACCCTGCAATGTTTCCATTTTGTTTCTGAATTTTCCATCACTTTTCAAACTCAAAGATTGAGTCAGAGAAAGGGACAGGG TCAATGGTTTTAGGGGAGTGAAACTAAGCATTAACACCTACCATTTCAGTTTTCACTACCCTACACTTTCAACCCATTAT TACCCTTTACCTCACAGGAACATAACATAACACACCCTGTTTTTTTTTTTTGGTCTTTTTCATTACCTACCTTTAACCTT TACCATTCTCATGTTAGGAGAAGAGGGTAACGGCGGCGGTGGCGCTCCCCGGAGACCATACCCGCGTTCAGTTTCCTGGA CCGACCGGAAGCTGCTGGCGCGCAACAGACCGAGACCGTCTCTTCCGCCGCTTCAGCCTCTGTCCATCACCCGCCGCAGC GTGGAGGACTGGCCGAGCGCCGGATCTGACGATCTCGGCGTTTGGCCGCAGCAGGCACAGACTCCGAGAGGGACTTCACC CGCCTCTGAGCCGGGTCGACCCGGTTTGGAATTCGAGTTCCAGAAGGACAAGCTCGCGTTCTACGACAAGGAGTGTTCGA GGATCGCGGAGCACGTGTATCTCGGAAGCGACACGGTGGCGAAGAACCACGGGCTTCTCCGGCAGAATGAAATCACGCAC GTGCTGAACTGCGTCGGGTTCGTGTGCCCTGAGTATTTCAAGAGCGAGTTCGTCTACAAAACGCTCTGGCTTCATGATTC CCCATCAGAGGACATCACCAGCATCCTGTACGATGTTTTCGATTACTTTGAGGATGTTCGTGAACAGAAGGGTCGTGTCC TCGTACATTGTTGTCAGGGGGTGTCTCGATCAACCTCTCTGGTGATAGCATACCTCATGTGGAGGGAGGGGCAGAGTTTT GAAGACGCGTTTCATTATGTGAAGAATATGAGGGGTGTCACCAATCCAAACATGGGTTTTGCTTGTCAACTTCTTCAGTG TCAGAAGAGGGTTCATGCTTTACCTGCAAGTCCTAATTCTATTGTGAGAATGTATAGAATGGCTCCTCATTCTTCTTATG ATCCTCTTCATTTGGTTCCTAAGTCGGTGACTCATCCTAGTGCTAAAGCACTTGATTCTCGTGGGGCTTACATTGTTCAT GTTCATGTTCCTTCTGCTATTTATGTGTGGATTGGGAAGCATTGTACCTCTGCCATGGCTTGTAATGCGAAATCGGCAGC CGTTCAGGTTATTCGATACGAGAGGGTGACCGGTTCGGTTCACAACATTGATGAAGATGAAGAGCCATTGGAGTTTTGGG CTGCTCTTTCTAATTATCAGCAATTTGGAGATGTCAAGAAGGATGTTGAAAGAATGGAGATTGATGTTGAAATTGATACC GGAATTCGTCCGAGGAACGTCGAGGAGTATGATTTGGATTTTGAGATTTTCAACAAGGCACTTGCTGGTGGGGTTGTTCC ACCTTTTTCTCTGTCTGATGTTGCTGGATCAGAAACTTGTCTTCCTGCTAGAGAAGTTGGTTGGGGGAGACTGAGAAGGA AGCTTGCTAGTGGTATCATGAAAGGGCTGTTCAATTCCCCTAAATGCAGTGACACAACCTCATCCAAAGATGAATCAGGT GTGAAAATGGATGAGGAAAATCAGCATCCTGTGGTTGATCTTGATCCTTTACCGCCATCCTCAAAAAACCATGTTTGTGA TGGTTCATCAGAGTACTGTGAACTTGTTGCTAGGGTTGATTCATCCCTGCCACCATCAGATTCTTTTCCTAGTATCCTAA GAAGCAGCCAAAAATTCAGTTCCAAGGCATCAACAATTTCTCCTAACAGTTCTGAGTGTGCCAGTTCTTTTACATCTTCA CCTTCCTCTCAGCAGCCATCACTATCTGAATCAACTGAACCCTTTTGCTTCAAAGATGTGGCTTTCTCTGAAAGACCCTC TTCACTTCACAATTCATCTTCAGGTGCATTTTTAGCTAACAAAGGATCTGCCCCCTCAATTGCAGAGCGCAGAGGGAGTA AACCGCCTCGCATGTTGCTTCGTTCAGCCAGTGAATCAGAAAACGCCCGCAGGATTGTAAGATCACAGTCATTTGCTTTG CCTGACATGGATGGTGACTTGATGAAGAATGTTAGTTGCAAGAAATCTGATGGTGAACAGAAAGGAAATTAGCTAGTATC AGATGAAGATATCATTAATACACCTGTTGATAGTGAGATTAGTAGCAGTGGCAGAGGATCATTGTAGTATGGGAATGTTA TGCTTCAAGTAGAGCAGTTAAAGAAAAAGTTAACCCGATGATAATTGTTCAATTTAGTCTGTATAGCCATAGTTGAGCTC ATATGATCTATTTTTGGAGGGTTTTCTTAATATTGGTGCATATGACTGTAAGGAGTAGAGTAGGCTGAGCAATAAATATC TACACAGATGAAATGCAGAGCATCTGAAAGTACATAACAATGATCAAATTTAAGAGAATGTTAAGGCTATTTTTTCTCTT CTTTTTCGTCTATTTTTCTTGTTCATGTTTATTCTAGCACCAGCCAGTATGAATAATTGGTACGAAATAGGAGTTTTTTT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0392500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTAGGAGAAGAGGGTAACGGCGGCGGTGGCGCTCCCCGGAGACCATACCCGCGTTCAGTTTCCTGGACCGACCGGAA GCTGCTGGCGCGCAACAGACCGAGACCGTCTCTTCCGCCGCTTCAGCCTCTGTCCATCACCCGCCGCAGCGTGGAGGACT GGCCGAGCGCCGGATCTGACGATCTCGGCGTTTGGCCGCAGCAGGCACAGACTCCGAGAGGGACTTCACCCGCCTCTGAG CCGGGTCGACCCGGTTTGGAATTCGAGTTCCAGAAGGACAAGCTCGCGTTCTACGACAAGGAGTGTTCGAGGATCGCGGA GCACGTGTATCTCGGAAGCGACACGGTGGCGAAGAACCACGGGCTTCTCCGGCAGAATGAAATCACGCACGTGCTGAACT GCGTCGGGTTCGTGTGCCCTGAGTATTTCAAGAGCGAGTTCGTCTACAAAACGCTCTGGCTTCATGATTCCCCATCAGAG GACATCACCAGCATCCTGTACGATGTTTTCGATTACTTTGAGGATGTTCGTGAACAGAAGGGTCGTGTCCTCGTACATTG TTGTCAGGGGGTGTCTCGATCAACCTCTCTGGTGATAGCATACCTCATGTGGAGGGAGGGGCAGAGTTTTGAAGACGCGT TTCATTATGTGAAGAATATGAGGGGTGTCACCAATCCAAACATGGGTTTTGCTTGTCAACTTCTTCAGTGTCAGAAGAGG GTTCATGCTTTACCTGCAAGTCCTAATTCTATTGTGAGAATGTATAGAATGGCTCCTCATTCTTCTTATGATCCTCTTCA TTTGGTTCCTAAGTCGGTGACTCATCCTAGTGCTAAAGCACTTGATTCTCGTGGGGCTTACATTGTTCATGTTCATGTTC CTTCTGCTATTTATGTGTGGATTGGGAAGCATTGTACCTCTGCCATGGCTTGTAATGCGAAATCGGCAGCCGTTCAGGTT ATTCGATACGAGAGGGTGACCGGTTCGGTTCACAACATTGATGAAGATGAAGAGCCATTGGAGTTTTGGGCTGCTCTTTC TAATTATCAGCAATTTGGAGATGTCAAGAAGGATGTTGAAAGAATGGAGATTGATGTTGAAATTGATACCGGAATTCGTC CGAGGAACGTCGAGGAGTATGATTTGGATTTTGAGATTTTCAACAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTTTCT CTGTCTGATGTTGCTGGATCAGAAACTTGTCTTCCTGCTAGAGAAGTTGGTTGGGGGAGACTGAGAAGGAAGCTTGCTAG TGGTATCATGAAAGGGCTGTTCAATTCCCCTAAATGCAGTGACACAACCTCATCCAAAGATGAATCAGGTGTGAAAATGG ATGAGGAAAATCAGCATCCTGTGGTTGATCTTGATCCTTTACCGCCATCCTCAAAAAACCATGTTTGTGATGGTTCATCA GAGTACTGTGAACTTGTTGCTAGGGTTGATTCATCCCTGCCACCATCAGATTCTTTTCCTAGTATCCTAAGAAGCAGCCA AAAATTCAGTTCCAAGGCATCAACAATTTCTCCTAACAGTTCTGAGTGTGCCAGTTCTTTTACATCTTCACCTTCCTCTC AGCAGCCATCACTATCTGAATCAACTGAACCCTTTTGCTTCAAAGATGTGGCTTTCTCTGAAAGACCCTCTTCACTTCAC AATTCATCTTCAGGTGCATTTTTAGCTAACAAAGGATCTGCCCCCTCAATTGCAGAGCGCAGAGGGAGTAAACCGCCTCG CATGTTGCTTCGTTCAGCCAGTGAATCAGAAAACGCCCGCAGGATTGTAAGATCACAGTCATTTGCTTTGCCTGACATGG ATGGTGACTTGATGAAGAATGTTAGTTGCAAGAAATCTGATGGTGAACAGAAAGGAAATTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0392500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLGEEGNGGGGAPRRPYPRSVSWTDRKLLARNRPRPSLPPLQPLSITRRSVEDWPSAGSDDLGVWPQQAQTPRGTSPASE PGRPGLEFEFQKDKLAFYDKECSRIAEHVYLGSDTVAKNHGLLRQNEITHVLNCVGFVCPEYFKSEFVYKTLWLHDSPSE DITSILYDVFDYFEDVREQKGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFHYVKNMRGVTNPNMGFACQLLQCQKR VHALPASPNSIVRMYRMAPHSSYDPLHLVPKSVTHPSAKALDSRGAYIVHVHVPSAIYVWIGKHCTSAMACNAKSAAVQV IRYERVTGSVHNIDEDEEPLEFWAALSNYQQFGDVKKDVERMEIDVEIDTGIRPRNVEEYDLDFEIFNKALAGGVVPPFS LSDVAGSETCLPAREVGWGRLRRKLASGIMKGLFNSPKCSDTTSSKDESGVKMDEENQHPVVDLDPLPPSSKNHVCDGSS EYCELVARVDSSLPPSDSFPSILRSSQKFSSKASTISPNSSECASSFTSSPSSQQPSLSESTEPFCFKDVAFSERPSSLH NSSSGAFLANKGSAPSIAERRGSKPPRMLLRSASESENARRIVRSQSFALPDMDGDLMKNVSCKKSDGEQKGN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 84 84 - –
PANTHER
PTHR46381:SF4
31 604 574 2.4E-226 –
PANTHER
PTHR46381
31 604 574 2.4E-226 –
MobiDBLite
mobidb-lite
63 77 15 - –
Gene3D
G3DSA:3.90.190.10
94 245 152 1.1E-43
IPR029021
SUPERFAMILY
SSF52799
96 242 147 8.57E-36
IPR029021
ProSiteProfiles
PS50054
101 242 142 33.824
IPR020422
SMART
SM00195
101 240 140 1.6E-34
IPR020422
CDD
cd14498
102 236 135 1.69077E-55 –
Pfam
PF00782
109 239 131 3.5E-28
IPR000340
ProSiteProfiles
PS50056
170 221 52 12.611
IPR000387
ProSitePatterns
PS00383
185 195 11 -
IPR016130
SUPERFAMILY
SSF55753
247 349 103 2.02E-14 –
Gene3D
G3DSA:3.40.20.10
252 353 102 2.7E-11
IPR029006
MobiDBLite
mobidb-lite
437 470 34 - –
MobiDBLite
mobidb-lite
445 461 17 - –
MobiDBLite
mobidb-lite
510 540 31 - –
MobiDBLite
mobidb-lite
559 633 75 - –
MobiDBLite
mobidb-lite
618 633 16 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004725
Molecular function Protein tyrosine phosphatase activity Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0008138
Molecular function Protein tyrosine/serine/threonine phosphatase activity Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0016311
Biological process Dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
Subterm of
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0392500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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