Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0393900 |
| Transcript ID | LotjaGi4g1v0393900.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT1G10130.1 endoplasmic reticulum-type calcium-transporting ATPase 3; Swiss-Prot: sp|P22036|ATMB_SALTY Magnesium-transporting ATPase, P-type 1; TrEMBL-Plants: tr|A0A0B2PFZ4|A0A0B2PFZ4_GLYSO Magnesium-transporting ATPase, P-type 1; Found in the gene: LotjaGi4g1v0393900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77223785..77227958) extracted from Lotus japonicus Gifu genome v1.2.
GTCTTCAATTATGTGCAATTCGTGAAGCCAAACATGTTATAAGATTGTGTATCTTTCTCTGTTAACAATGTTCTTCAATT TCTGTGTAGGCTTAACATTCACTGAAGCTGAGAGCAGGCTGCAAGAAAATGGTCCAAACGTTCCATTTGATTATTCTTTT CCAAGCTGGTGGCATTTTCTATGGAAAGCTCTTTTCCACGCTTTCAACATGATTCTCATTGTTTTATCTGCTCTGTCATT CATCACCTGTGACTATCCAAATGGATCCATCATGCTCATATTGGTTTTCATCAGTGTCTCCCTCCGTTTCTATCAGGTAT GACTATGAATTTCTACATTACTTGGTTCAATTGAATGAAGAAATATTTCTCTTCCCTTTCCCTCCTCTTATCTTGCACCT TTACCGTGGTTCATAGGAATATAGCAGCTCGAAAGCAGCTAAGAGGCTTTCAGAATTTTTGAGATGCCCGGTGCGAGTTC AAAGATGTGCCGGTAGAGTTGTGCAGACAGAATTGAAGGTTCAAGTTGATCACAGGGATGTAGTTCCTGGTGACATTGTG ATTTTTGAACCTGGGGACCTCTTTCCAGGGGATATCAGATTGTTATCTTCAACACATCTTGTTGTAAGGTATGTCAACTG AAAATCTGGTGGTTTTATTGATGATTTGAATATCAGATGGTGATTTGATACCTTTTTAACAGCCAGGCCTCATTAACTGG GGAGTCTTGGACAACGGAAAAAACTGCTGATGTTAGAGAAGATCACAGCACACCTTTACTAGATTTAAAGAACATCTGCT TTATGGTTAGTAATTCAAACCCCCTTCCTTGTTTTGTTTCAATGGAATAAGGTTTCAAATTGGAGTCGCGGCCGTGAATC TTGATACTGTGGAAAATTAAGGACACATGAGGCTGATGCGACTACCATCGCGATGCAGTCATGGAGACAGTTAGGATTCA ATTGCAAGATTTGTAACTTGAGTCCCACATTGGAAGTATGACATTCTAATGTGGGGTTTACAAGCCTTGGGCTCTCCAAC AGTTGGCTTTTGTGGTATGGTTCTCGCCTTCTCGGAAGGTTTTTATCAATTGATATCGGTGCCTTCCACCATGTCTCTCG GCTGCAAACGAGCAGTGCGGGTGGTGATGTCTGCATTGCGGCGTTTGCTCGGCCCTAGTCAAAGGGCTATGTATGGTTCT CCCTGGGTTTTTATCAGAGACCTCCAAAATCATGAGCAATTTAAAACCATGCAATGAAAGTTATATCTTCAGTTTAGAGT TACATCTCACAAAGTACCAAACAGATTCAGTTTATAATTTTGTAATTTTCCATACCTTTATGATATTTTGGCCTTAAAAC ATATTGAATTCCCAAACAGATATTGTCAGCTTAATAACAGAGAACTTTTCTTGGAAGTGACTAGCTATTATGAACATTGC AGGGTACAAACGTGGTATCAGGTACTGGAACAGGCTTAGTTATTTCAACTGGATCCAATACTTACTTGAGCACCATGTTT TCCAAGGTTGGGAAGAAGAAGCCACAAGATGACTTTGAAAAGGGTCTCAAATGGATATTTTACATGCTTATTTCTGTTAT GCTAGTGGTTGTTACAGTCATGTTTGTGACAGAATACACATCATCTCTTGATTTGAGCAAAAGTATTCTCTTTGCGATCA CAGTAGCATCTGCACTCAATCCTCAGATGCTACCCCTCATCATCAACACATGCCTTGCAAAAGGAGCCCTTGCTATGGCT AAAGACAGATGTATAGTAAAAAGCTTAACAGCTATACGCGAGATGGGATCAATGTGAGTACAAATTCACATTAAAATCAA CTGATTGATGATTTAGTGCATGTTTCGTAATTATTCTACAATTGATTCGAAAGTCAGAATCAATTCTGGTGAGAAACTTC TGTAAGTAGCTTCTGAGATCCATATAATTGATTCTGAGAAAAAGATCCTAGCATTCTATTATCTTGATGCTTGGGTCTAA ATTAGGAGCAAACTTCTAAATAGATATGCTAGAATCTAGTTTAACAATAACTGCATCATCAACAATGAGAACTTAGGGTC CAAAAACTTGCAAGGCATGTGATGAGTGGTTTGTTTTGCTTCAAGTATGCATCTTTTTAGCAAACTCTTCTACTATGCAC TTACATTTTATAGTGTTGCAGGGATATCCTTTGTATTGACAAGACAGGCACCCTCACAATGAATCATGCAATCATGGTTA ATCATCTTGACTGTAGAGGTTTACCCCAAGAAAAAGTTCTGCGCTTTGCTTTCCTTAGTTCTTACTTCAAGACTGATCAT AATTTTCCTTTGGATGATGCAATCATGGCACATGTATATTCAAATGGATTCAGATTTCAACCATCCAAGTGGAGGAAGGT AGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAAGACATGCACTCCCAGTTCTTTG GCAGGTACATGGTAACAAAAGGAGCATTGGAGGAAGTCATGAGAGTTTGTTCTTTTATTGAGAATTTTGATAAAGATGGA ATTTCCACCTTCTCTTTAGATGACTACCAGAGGATTTTGAATCTGTCTGAAGAATTGAGCAATGAAGGGTTAAGGGTTAT AGCAGTAGCTATAAGGAAGCTGGAAATGGTGAGTCTTTTCCAAATTAATGTCTTCTTACCTTCTTTTCAACTTATCATTA TTTTCTTTCTTTTCATGCCAATGACACTCACTTTGCATATCAGATAGCTTAACAAGATTAGGATCACCTAAGCGGTTGTG CCATTTTGCTATGAACCAACCGTGCCTGAAGCTCAAGCTGTTTATATTTCCAACACATCCCTCACCCTTTTCGCACAAGA ACTCATTAATCGAACTCTACATCAAGTAGTCATAACCAGCTATCCTAAAATCTGAAGTTGTTTGCTGAAGACGCGATAAT TGTTATATATTATAACATGTCTCACTATCAATTTCAATTTATGTGACATGCAGCAGCAAACATGTGAAACAAGTAATGGA ATCAGGAGAGGTTGTGAGGATTTTGAAAGAGACATGATGTTTCTTGGCCTGGTAACATTTTTTGACCCACCAAAGGACTC AGCAAAGCAAGCACTGTTTCAGTTGGCCAAGATGGGAGTTCAAGCAAAGGTTCTAACCGGTGACTCTCTCAGTTTGGCAA CAAGGGTATGCAGAGAAGTTGGAATCAAAACCACACATGTAATCACAGGGCCAGAGCTAGAGCAACTAGACCAAGACACT TTCCATGAAACTGTCCAAACAGCCACAGTGCTAGCTCGCCTCACCCCGACTCAGAAACTAAGAGTGGTTCAATCCTTGCA GACAAATGGAAACCACATTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTTGCTCTTGATGCTGCCCATGTAAGCA TTTCAGTGGACTCAGGTGTTGCAATTGCCAAAGACATGGCAGATATAATCTTACTAGAGAAAGATCTCAATGTGCTAGTT GCAGGAGTGGAGCATGGAAGACTCACATTTGGGAACACAATGAAGTATGTGAAGATGTCAGTGATTGCCAACTTGGGAAG TGTGATTTCACTCCTCATAGCATCACTTTTACTCAGGAATGAGCCTTTAACAGCTAGGCAGCTTCTCACTCAGAATTTCA TATACAGTGTGGGACAAATTGCTATCCCTTGGGACAAGATGGATGAAGAGTATGTGAAGACTCCTCACAAATTTTCAGGG AAAGGGTTACCAATGTTCATATTGTGGAATGCACCTGTGTGCACTCTCTGTGATGTTGCAACACTCTTGTTTCTCTGGTT CTATTACAAGTCTTATGATGACTTGGAAGATAAATTCTTCCATTCAGCTTGGTTTATTGAGGGTCTTCTCATGCAGACAC TCATCATCCATTTGATTAGGACAGAGAAAGTCCCTTTCATACAGGATGTTGCTTCTTGGCCAGTGATTTGTTCCACTCTT GTGGTTTCTGCTATTGGAATTGCATTTCCATTCACACCCATTGGGAAGGTCATGGGATTCATTGTTTTACCTGTCTCATT TTTTGGGTTTTTGGTTGTTCTTTTTCTGGGATATTTCACTATTGGCCAGGTTGTTAAGAGACTTTACATAATGGTTTATA AGAGATGGCTATGA
CDS sequence (LotjaGi4g1v0393900.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCTTCAATTTCTGTGTAGGCTTAACATTCACTGAAGCTGAGAGCAGGCTGCAAGAAAATGGTCCAAACGTTCCATT TGATTATTCTTTTCCAAGCTGGTGGCATTTTCTATGGAAAGCTCTTTTCCACGCTTTCAACATGATTCTCATTGTTTTAT CTGCTCTGTCATTCATCACCTGTGACTATCCAAATGGATCCATCATGCTCATATTGGTTTTCATCAGTGTCTCCCTCCGT TTCTATCAGGAATATAGCAGCTCGAAAGCAGCTAAGAGGCTTTCAGAATTTTTGAGATGCCCGGTGCGAGTTCAAAGATG TGCCGGTAGAGTTGTGCAGACAGAATTGAAGGTTCAAGTTGATCACAGGGATGTAGTTCCTGGTGACATTGTGATTTTTG AACCTGGGGACCTCTTTCCAGGGGATATCAGATTGTTATCTTCAACACATCTTGTTGTAAGCCAGGCCTCATTAACTGGG GAGTCTTGGACAACGGAAAAAACTGCTGATGTTAGAGAAGATCACAGCACACCTTTACTAGATTTAAAGAACATCTGCTT TATGGGTACAAACGTGGTATCAGGTACTGGAACAGGCTTAGTTATTTCAACTGGATCCAATACTTACTTGAGCACCATGT TTTCCAAGGTTGGGAAGAAGAAGCCACAAGATGACTTTGAAAAGGGTCTCAAATGGATATTTTACATGCTTATTTCTGTT ATGCTAGTGGTTGTTACAGTCATGTTTGTGACAGAATACACATCATCTCTTGATTTGAGCAAAAGTATTCTCTTTGCGAT CACAGTAGCATCTGCACTCAATCCTCAGATGCTACCCCTCATCATCAACACATGCCTTGCAAAAGGAGCCCTTGCTATGG CTAAAGACAGATGTATAGTAAAAAGCTTAACAGCTATACGCGAGATGGGATCAATGGATATCCTTTGTATTGACAAGACA GGCACCCTCACAATGAATCATGCAATCATGGTTAATCATCTTGACTGTAGAGGTTTACCCCAAGAAAAAGTTCTGCGCTT TGCTTTCCTTAGTTCTTACTTCAAGACTGATCATAATTTTCCTTTGGATGATGCAATCATGGCACATGTATATTCAAATG GATTCAGATTTCAACCATCCAAGTGGAGGAAGGTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATC TTAGAAACAGAAGACATGCACTCCCAGTTCTTTGGCAGGTACATGGTAACAAAAGGAGCATTGGAGGAAGTCATGAGAGT TTGTTCTTTTATTGAGAATTTTGATAAAGATGGAATTTCCACCTTCTCTTTAGATGACTACCAGAGGATTTTGAATCTGT CTGAAGAATTGAGCAATGAAGGGTTAAGGGTTATAGCAGTAGCTATAAGGAAGCTGGAAATGCAAACATGTGAAACAAGT AATGGAATCAGGAGAGGTTGTGAGGATTTTGAAAGAGACATGATGTTTCTTGGCCTGGTAACATTTTTTGACCCACCAAA GGACTCAGCAAAGCAAGCACTGTTTCAGTTGGCCAAGATGGGAGTTCAAGCAAAGGTTCTAACCGGTGACTCTCTCAGTT TGGCAACAAGGGTATGCAGAGAAGTTGGAATCAAAACCACACATGTAATCACAGGGCCAGAGCTAGAGCAACTAGACCAA GACACTTTCCATGAAACTGTCCAAACAGCCACAGTGCTAGCTCGCCTCACCCCGACTCAGAAACTAAGAGTGGTTCAATC CTTGCAGACAAATGGAAACCACATTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTTGCTCTTGATGCTGCCCATG TAAGCATTTCAGTGGACTCAGGTGTTGCAATTGCCAAAGACATGGCAGATATAATCTTACTAGAGAAAGATCTCAATGTG CTAGTTGCAGGAGTGGAGCATGGAAGACTCACATTTGGGAACACAATGAAGTATGTGAAGATGTCAGTGATTGCCAACTT GGGAAGTGTGATTTCACTCCTCATAGCATCACTTTTACTCAGGAATGAGCCTTTAACAGCTAGGCAGCTTCTCACTCAGA ATTTCATATACAGTGTGGGACAAATTGCTATCCCTTGGGACAAGATGGATGAAGAGTATGTGAAGACTCCTCACAAATTT TCAGGGAAAGGGTTACCAATGTTCATATTGTGGAATGCACCTGTGTGCACTCTCTGTGATGTTGCAACACTCTTGTTTCT CTGGTTCTATTACAAGTCTTATGATGACTTGGAAGATAAATTCTTCCATTCAGCTTGGTTTATTGAGGGTCTTCTCATGC AGACACTCATCATCCATTTGATTAGGACAGAGAAAGTCCCTTTCATACAGGATGTTGCTTCTTGGCCAGTGATTTGTTCC ACTCTTGTGGTTTCTGCTATTGGAATTGCATTTCCATTCACACCCATTGGGAAGGTCATGGGATTCATTGTTTTACCTGT CTCATTTTTTGGGTTTTTGGTTGTTCTTTTTCTGGGATATTTCACTATTGGCCAGGTTGTTAAGAGACTTTACATAATGG TTTATAAGAGATGGCTATGA
Protein sequence (LotjaGi4g1v0393900.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFFNFCVGLTFTEAESRLQENGPNVPFDYSFPSWWHFLWKALFHAFNMILIVLSALSFITCDYPNGSIMLILVFISVSLR FYQEYSSSKAAKRLSEFLRCPVRVQRCAGRVVQTELKVQVDHRDVVPGDIVIFEPGDLFPGDIRLLSSTHLVVSQASLTG ESWTTEKTADVREDHSTPLLDLKNICFMGTNVVSGTGTGLVISTGSNTYLSTMFSKVGKKKPQDDFEKGLKWIFYMLISV MLVVVTVMFVTEYTSSLDLSKSILFAITVASALNPQMLPLIINTCLAKGALAMAKDRCIVKSLTAIREMGSMDILCIDKT GTLTMNHAIMVNHLDCRGLPQEKVLRFAFLSSYFKTDHNFPLDDAIMAHVYSNGFRFQPSKWRKVDEIPFDFIRRRVSVI LETEDMHSQFFGRYMVTKGALEEVMRVCSFIENFDKDGISTFSLDDYQRILNLSEELSNEGLRVIAVAIRKLEMQTCETS NGIRRGCEDFERDMMFLGLVTFFDPPKDSAKQALFQLAKMGVQAKVLTGDSLSLATRVCREVGIKTTHVITGPELEQLDQ DTFHETVQTATVLARLTPTQKLRVVQSLQTNGNHIVGFLGDGVNDSLALDAAHVSISVDSGVAIAKDMADIILLEKDLNV LVAGVEHGRLTFGNTMKYVKMSVIANLGSVISLLIASLLLRNEPLTARQLLTQNFIYSVGQIAIPWDKMDEEYVKTPHKF SGKGLPMFILWNAPVCTLCDVATLLFLWFYYKSYDDLEDKFFHSAWFIEGLLMQTLIIHLIRTEKVPFIQDVASWPVICS TLVVSAIGIAFPFTPIGKVMGFIVLPVSFFGFLVVLFLGYFTIGQVVKRLYIMVYKRWL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| SUPERFAMILY | 5 | 856 | 852 | 1.44E-75 | ||
| TIGRFAM | 7 | 858 | 852 | 3.7E-255 | ||
| PANTHER | 8 | 856 | 849 | 0.0 | – | |
| PANTHER | 8 | 856 | 849 | 0.0 | – | |
| Gene3D | 8 | 219 | 212 | 8.9E-69 | – | |
| Pfam | 8 | 57 | 50 | 7.9E-9 | ||
| TMHMM | 37 | 59 | 23 | - | – | |
| Phobius | 37 | 59 | 23 | - | – | |
| Gene3D | 40 | 312 | 273 | 8.9E-69 | – | |
| Phobius | 60 | 64 | 5 | - | – | |
| Phobius | 65 | 82 | 18 | - | – | |
| TIGRFAM | 69 | 363 | 295 | 5.2E-30 | ||
| Phobius | 83 | 231 | 149 | - | – | |
| SUPERFAMILY | 111 | 215 | 105 | 3.53E-25 | ||
| Pfam | 111 | 295 | 185 | 3.5E-33 | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| PRINTS | 229 | 245 | 17 | 3.2E-29 | ||
| Phobius | 232 | 251 | 20 | - | – | |
| Phobius | 252 | 262 | 11 | - | – | |
| Phobius | 263 | 287 | 25 | - | – | |
| Phobius | 288 | 657 | 370 | - | – | |
| SFLD | 298 | 649 | 352 | 0.0 | – | |
| SFLD | 298 | 649 | 352 | 0.0 | – | |
| SUPERFAMILY | 309 | 506 | 198 | 1.19E-30 | ||
| Pfam | 312 | 612 | 301 | 1.3E-14 | – | |
| Gene3D | 313 | 325 | 13 | 8.9E-69 | ||
| ProSitePatterns | 318 | 324 | 7 | - | ||
| Gene3D | 379 | 505 | 127 | 4.8E-71 | ||
| SUPERFAMILY | 490 | 647 | 158 | 9.18E-33 | ||
| Gene3D | 506 | 643 | 138 | 4.8E-71 | ||
| TIGRFAM | 566 | 678 | 113 | 5.7E-24 | ||
| Gene3D | 644 | 753 | 110 | 4.8E-71 | – | |
| PRINTS | 657 | 672 | 16 | 3.2E-29 | ||
| TMHMM | 658 | 680 | 23 | - | – | |
| Phobius | 658 | 680 | 23 | - | – | |
| Phobius | 681 | 685 | 5 | - | – | |
| Phobius | 686 | 706 | 21 | - | – | |
| Phobius | 707 | 726 | 20 | - | – | |
| PRINTS | 707 | 720 | 14 | 3.2E-29 | ||
| Phobius | 727 | 751 | 25 | - | – | |
| PRINTS | 727 | 743 | 17 | 3.2E-29 | ||
| TMHMM | 729 | 751 | 23 | - | – | |
| Phobius | 752 | 762 | 11 | - | – | |
| TMHMM | 761 | 780 | 20 | - | – | |
| PRINTS | 762 | 783 | 22 | 3.2E-29 | ||
| Phobius | 763 | 781 | 19 | - | – | |
| Phobius | 782 | 792 | 11 | - | – | |
| TMHMM | 792 | 814 | 23 | - | – | |
| Phobius | 793 | 813 | 21 | - | – | |
| PRINTS | 812 | 833 | 22 | 3.2E-29 | ||
| Phobius | 814 | 818 | 5 | - | – | |
| TMHMM | 819 | 841 | 23 | - | – | |
| Phobius | 819 | 843 | 25 | - | – | |
| Phobius | 844 | 859 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium-importing ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mg2+(out) -> ADP + phosphate + Mg2+(in). | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0393900.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…