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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0393900 |
| Transcript ID | LotjaGi4g1v0393900.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT1G10130.1 endoplasmic reticulum-type calcium-transporting ATPase 3; Swiss-Prot: sp|P22036|ATMB_SALTY Magnesium-transporting ATPase, P-type 1; TrEMBL-Plants: tr|A0A0B2PFZ4|A0A0B2PFZ4_GLYSO Magnesium-transporting ATPase, P-type 1; Found in the gene: LotjaGi4g1v0393900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77223843..77227958) extracted from Lotus japonicus Gifu genome v1.2.
CTGTTAACAATGTTCTTCAATTTCTGTGTAGGCTTAACATTCACTGAAGCTGAGAGCAGGCTGCAAGAAAATGGTCCAAA CGTTCCATTTGATTATTCTTTTCCAAGCTGGTGGCATTTTCTATGGAAAGCTCTTTTCCACGCTTTCAACATGATTCTCA TTGTTTTATCTGCTCTGTCATTCATCACCTGTGACTATCCAAATGGATCCATCATGCTCATATTGGTTTTCATCAGTGTC TCCCTCCGTTTCTATCAGGTATGACTATGAATTTCTACATTACTTGGTTCAATTGAATGAAGAAATATTTCTCTTCCCTT TCCCTCCTCTTATCTTGCACCTTTACCGTGGTTCATAGGAATATAGCAGCTCGAAAGCAGCTAAGAGGCTTTCAGAATTT TTGAGATGCCCGGTGCGAGTTCAAAGATGTGCCGGTAGAGTTGTGCAGACAGAATTGAAGGTTCAAGTTGATCACAGGGA TGTAGTTCCTGGTGACATTGTGATTTTTGAACCTGGGGACCTCTTTCCAGGGGATATCAGATTGTTATCTTCAACACATC TTGTTGTAAGGTATGTCAACTGAAAATCTGGTGGTTTTATTGATGATTTGAATATCAGATGGTGATTTGATACCTTTTTA ACAGCCAGGCCTCATTAACTGGGGAGTCTTGGACAACGGAAAAAACTGCTGATGTTAGAGAAGATCACAGCACACCTTTA CTAGATTTAAAGAACATCTGCTTTATGGTTAGTAATTCAAACCCCCTTCCTTGTTTTGTTTCAATGGAATAAGGTTTCAA ATTGGAGTCGCGGCCGTGAATCTTGATACTGTGGAAAATTAAGGACACATGAGGCTGATGCGACTACCATCGCGATGCAG TCATGGAGACAGTTAGGATTCAATTGCAAGATTTGTAACTTGAGTCCCACATTGGAAGTATGACATTCTAATGTGGGGTT TACAAGCCTTGGGCTCTCCAACAGTTGGCTTTTGTGGTATGGTTCTCGCCTTCTCGGAAGGTTTTTATCAATTGATATCG GTGCCTTCCACCATGTCTCTCGGCTGCAAACGAGCAGTGCGGGTGGTGATGTCTGCATTGCGGCGTTTGCTCGGCCCTAG TCAAAGGGCTATGTATGGTTCTCCCTGGGTTTTTATCAGAGACCTCCAAAATCATGAGCAATTTAAAACCATGCAATGAA AGTTATATCTTCAGTTTAGAGTTACATCTCACAAAGTACCAAACAGATTCAGTTTATAATTTTGTAATTTTCCATACCTT TATGATATTTTGGCCTTAAAACATATTGAATTCCCAAACAGATATTGTCAGCTTAATAACAGAGAACTTTTCTTGGAAGT GACTAGCTATTATGAACATTGCAGGGTACAAACGTGGTATCAGGTACTGGAACAGGCTTAGTTATTTCAACTGGATCCAA TACTTACTTGAGCACCATGTTTTCCAAGGTTGGGAAGAAGAAGCCACAAGATGACTTTGAAAAGGGTCTCAAATGGATAT TTTACATGCTTATTTCTGTTATGCTAGTGGTTGTTACAGTCATGTTTGTGACAGAATACACATCATCTCTTGATTTGAGC AAAAGTATTCTCTTTGCGATCACAGTAGCATCTGCACTCAATCCTCAGATGCTACCCCTCATCATCAACACATGCCTTGC AAAAGGAGCCCTTGCTATGGCTAAAGACAGATGTATAGTAAAAAGCTTAACAGCTATACGCGAGATGGGATCAATGTGAG TACAAATTCACATTAAAATCAACTGATTGATGATTTAGTGCATGTTTCGTAATTATTCTACAATTGATTCGAAAGTCAGA ATCAATTCTGGTGAGAAACTTCTGTAAGTAGCTTCTGAGATCCATATAATTGATTCTGAGAAAAAGATCCTAGCATTCTA TTATCTTGATGCTTGGGTCTAAATTAGGAGCAAACTTCTAAATAGATATGCTAGAATCTAGTTTAACAATAACTGCATCA TCAACAATGAGAACTTAGGGTCCAAAAACTTGCAAGGCATGTGATGAGTGGTTTGTTTTGCTTCAAGTATGCATCTTTTT AGCAAACTCTTCTACTATGCACTTACATTTTATAGTGTTGCAGGGATATCCTTTGTATTGACAAGACAGGCACCCTCACA ATGAATCATGCAATCATGGTTAATCATCTTGACTGTAGAGGTTTACCCCAAGAAAAAGTTCTGCGCTTTGCTTTCCTTAG TTCTTACTTCAAGACTGATCATAATTTTCCTTTGGATGATGCAATCATGGCACATGTATATTCAAATGGATTCAGATTTC AACCATCCAAGTGGAGGAAGGTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAA GACATGCACTCCCAGTTCTTTGGCAGGTACATGGTAACAAAAGGAGCATTGGAGGAAGTCATGAGAGTTTGTTCTTTTAT TGAGAATTTTGATAAAGATGGAATTTCCACCTTCTCTTTAGATGACTACCAGAGGATTTTGAATCTGTCTGAAGAATTGA GCAATGAAGGGTTAAGGGTTATAGCAGTAGCTATAAGGAAGCTGGAAATGGTGAGTCTTTTCCAAATTAATGTCTTCTTA CCTTCTTTTCAACTTATCATTATTTTCTTTCTTTTCATGCCAATGACACTCACTTTGCATATCAGATAGCTTAACAAGAT TAGGATCACCTAAGCGGTTGTGCCATTTTGCTATGAACCAACCGTGCCTGAAGCTCAAGCTGTTTATATTTCCAACACAT CCCTCACCCTTTTCGCACAAGAACTCATTAATCGAACTCTACATCAAGTAGTCATAACCAGCTATCCTAAAATCTGAAGT TGTTTGCTGAAGACGCGATAATTGTTATATATTATAACATGTCTCACTATCAATTTCAATTTATGTGACATGCAGCAGCA AACATGTGAAACAAGTAATGGAATCAGGAGAGGTTGTGAGGATTTTGAAAGAGACATGATGTTTCTTGGCCTGGTAACAT TTTTTGACCCACCAAAGGACTCAGCAAAGCAAGCACTGTTTCAGTTGGCCAAGATGGGAGTTCAAGCAAAGGTTCTAACC GGTGACTCTCTCAGTTTGGCAACAAGGGTATGCAGAGAAGTTGGAATCAAAACCACACATGTAATCACAGGGCCAGAGCT AGAGCAACTAGACCAAGACACTTTCCATGAAACTGTCCAAACAGCCACAGTGCTAGCTCGCCTCACCCCGACTCAGAAAC TAAGAGTGGTTCAATCCTTGCAGACAAATGGAAACCACATTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTTGCT CTTGATGCTGCCCATGTAAGCATTTCAGTGGACTCAGGTGTTGCAATTGCCAAAGACATGGCAGATATAATCTTACTAGA GAAAGATCTCAATGTGCTAGTTGCAGGAGTGGAGCATGGAAGACTCACATTTGGGAACACAATGAAGTATGTGAAGATGT CAGTGATTGCCAACTTGGGAAGTGTGATTTCACTCCTCATAGCATCACTTTTACTCAGGAATGAGCCTTTAACAGCTAGG CAGCTTCTCACTCAGAATTTCATATACAGTGTGGGACAAATTGCTATCCCTTGGGACAAGATGGATGAAGAGTATGTGAA GACTCCTCACAAATTTTCAGGGAAAGGGTTACCAATGTTCATATTGTGGAATGCACCTGTGTGCACTCTCTGTGATGTTG CAACACTCTTGTTTCTCTGGTTCTATTACAAGTCTTATGATGACTTGGAAGATAAATTCTTCCATTCAGCTTGGTTTATT GAGGGTCTTCTCATGCAGACACTCATCATCCATTTGATTAGGACAGAGAAAGTCCCTTTCATACAGGATGTTGCTTCTTG GCCAGTGATTTGTTCCACTCTTGTGGTTTCTGCTATTGGAATTGCATTTCCATTCACACCCATTGGGAAGGTCATGGGAT TCATTGTTTTACCTGTCTCATTTTTTGGGTTTTTGGTTGTTCTTTTTCTGGGATATTTCACTATTGGCCAGGTTGTTAAG AGACTTTACATAATGGTTTATAAGAGATGGCTATGA
CDS sequence (LotjaGi4g1v0393900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCTTCAATTTCTGTGTAGGCTTAACATTCACTGAAGCTGAGAGCAGGCTGCAAGAAAATGGTCCAAACGTTCCATT TGATTATTCTTTTCCAAGCTGGTGGCATTTTCTATGGAAAGCTCTTTTCCACGCTTTCAACATGATTCTCATTGTTTTAT CTGCTCTGTCATTCATCACCTGTGACTATCCAAATGGATCCATCATGCTCATATTGGTTTTCATCAGTGTCTCCCTCCGT TTCTATCAGGAATATAGCAGCTCGAAAGCAGCTAAGAGGCTTTCAGAATTTTTGAGATGCCCGGTGCGAGTTCAAAGATG TGCCGGTAGAGTTGTGCAGACAGAATTGAAGGTTCAAGTTGATCACAGGGATGTAGTTCCTGGTGACATTGTGATTTTTG AACCTGGGGACCTCTTTCCAGGGGATATCAGATTGTTATCTTCAACACATCTTGTTGTAAGCCAGGCCTCATTAACTGGG GAGTCTTGGACAACGGAAAAAACTGCTGATGTTAGAGAAGATCACAGCACACCTTTACTAGATTTAAAGAACATCTGCTT TATGGGTACAAACGTGGTATCAGGTACTGGAACAGGCTTAGTTATTTCAACTGGATCCAATACTTACTTGAGCACCATGT TTTCCAAGGTTGGGAAGAAGAAGCCACAAGATGACTTTGAAAAGGGTCTCAAATGGATATTTTACATGCTTATTTCTGTT ATGCTAGTGGTTGTTACAGTCATGTTTGTGACAGAATACACATCATCTCTTGATTTGAGCAAAAGTATTCTCTTTGCGAT CACAGTAGCATCTGCACTCAATCCTCAGATGCTACCCCTCATCATCAACACATGCCTTGCAAAAGGAGCCCTTGCTATGG CTAAAGACAGATGTATAGTAAAAAGCTTAACAGCTATACGCGAGATGGGATCAATGGATATCCTTTGTATTGACAAGACA GGCACCCTCACAATGAATCATGCAATCATGGTTAATCATCTTGACTGTAGAGGTTTACCCCAAGAAAAAGTTCTGCGCTT TGCTTTCCTTAGTTCTTACTTCAAGACTGATCATAATTTTCCTTTGGATGATGCAATCATGGCACATGTATATTCAAATG GATTCAGATTTCAACCATCCAAGTGGAGGAAGGTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATC TTAGAAACAGAAGACATGCACTCCCAGTTCTTTGGCAGGTACATGGTAACAAAAGGAGCATTGGAGGAAGTCATGAGAGT TTGTTCTTTTATTGAGAATTTTGATAAAGATGGAATTTCCACCTTCTCTTTAGATGACTACCAGAGGATTTTGAATCTGT CTGAAGAATTGAGCAATGAAGGGTTAAGGGTTATAGCAGTAGCTATAAGGAAGCTGGAAATGCAGCAAACATGTGAAACA AGTAATGGAATCAGGAGAGGTTGTGAGGATTTTGAAAGAGACATGATGTTTCTTGGCCTGGTAACATTTTTTGACCCACC AAAGGACTCAGCAAAGCAAGCACTGTTTCAGTTGGCCAAGATGGGAGTTCAAGCAAAGGTTCTAACCGGTGACTCTCTCA GTTTGGCAACAAGGGTATGCAGAGAAGTTGGAATCAAAACCACACATGTAATCACAGGGCCAGAGCTAGAGCAACTAGAC CAAGACACTTTCCATGAAACTGTCCAAACAGCCACAGTGCTAGCTCGCCTCACCCCGACTCAGAAACTAAGAGTGGTTCA ATCCTTGCAGACAAATGGAAACCACATTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTTGCTCTTGATGCTGCCC ATGTAAGCATTTCAGTGGACTCAGGTGTTGCAATTGCCAAAGACATGGCAGATATAATCTTACTAGAGAAAGATCTCAAT GTGCTAGTTGCAGGAGTGGAGCATGGAAGACTCACATTTGGGAACACAATGAAGTATGTGAAGATGTCAGTGATTGCCAA CTTGGGAAGTGTGATTTCACTCCTCATAGCATCACTTTTACTCAGGAATGAGCCTTTAACAGCTAGGCAGCTTCTCACTC AGAATTTCATATACAGTGTGGGACAAATTGCTATCCCTTGGGACAAGATGGATGAAGAGTATGTGAAGACTCCTCACAAA TTTTCAGGGAAAGGGTTACCAATGTTCATATTGTGGAATGCACCTGTGTGCACTCTCTGTGATGTTGCAACACTCTTGTT TCTCTGGTTCTATTACAAGTCTTATGATGACTTGGAAGATAAATTCTTCCATTCAGCTTGGTTTATTGAGGGTCTTCTCA TGCAGACACTCATCATCCATTTGATTAGGACAGAGAAAGTCCCTTTCATACAGGATGTTGCTTCTTGGCCAGTGATTTGT TCCACTCTTGTGGTTTCTGCTATTGGAATTGCATTTCCATTCACACCCATTGGGAAGGTCATGGGATTCATTGTTTTACC TGTCTCATTTTTTGGGTTTTTGGTTGTTCTTTTTCTGGGATATTTCACTATTGGCCAGGTTGTTAAGAGACTTTACATAA TGGTTTATAAGAGATGGCTATGA
Protein sequence (LotjaGi4g1v0393900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFFNFCVGLTFTEAESRLQENGPNVPFDYSFPSWWHFLWKALFHAFNMILIVLSALSFITCDYPNGSIMLILVFISVSLR FYQEYSSSKAAKRLSEFLRCPVRVQRCAGRVVQTELKVQVDHRDVVPGDIVIFEPGDLFPGDIRLLSSTHLVVSQASLTG ESWTTEKTADVREDHSTPLLDLKNICFMGTNVVSGTGTGLVISTGSNTYLSTMFSKVGKKKPQDDFEKGLKWIFYMLISV MLVVVTVMFVTEYTSSLDLSKSILFAITVASALNPQMLPLIINTCLAKGALAMAKDRCIVKSLTAIREMGSMDILCIDKT GTLTMNHAIMVNHLDCRGLPQEKVLRFAFLSSYFKTDHNFPLDDAIMAHVYSNGFRFQPSKWRKVDEIPFDFIRRRVSVI LETEDMHSQFFGRYMVTKGALEEVMRVCSFIENFDKDGISTFSLDDYQRILNLSEELSNEGLRVIAVAIRKLEMQQTCET SNGIRRGCEDFERDMMFLGLVTFFDPPKDSAKQALFQLAKMGVQAKVLTGDSLSLATRVCREVGIKTTHVITGPELEQLD QDTFHETVQTATVLARLTPTQKLRVVQSLQTNGNHIVGFLGDGVNDSLALDAAHVSISVDSGVAIAKDMADIILLEKDLN VLVAGVEHGRLTFGNTMKYVKMSVIANLGSVISLLIASLLLRNEPLTARQLLTQNFIYSVGQIAIPWDKMDEEYVKTPHK FSGKGLPMFILWNAPVCTLCDVATLLFLWFYYKSYDDLEDKFFHSAWFIEGLLMQTLIIHLIRTEKVPFIQDVASWPVIC STLVVSAIGIAFPFTPIGKVMGFIVLPVSFFGFLVVLFLGYFTIGQVVKRLYIMVYKRWL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| SUPERFAMILY | 5 | 857 | 853 | 1.31E-75 | ||
| TIGRFAM | 7 | 859 | 853 | 8.9E-255 | ||
| PANTHER | 8 | 857 | 850 | 0.0 | – | |
| PANTHER | 8 | 857 | 850 | 0.0 | – | |
| Gene3D | 8 | 219 | 212 | 7.2E-69 | – | |
| Pfam | 8 | 57 | 50 | 7.9E-9 | ||
| TMHMM | 37 | 59 | 23 | - | – | |
| Phobius | 37 | 59 | 23 | - | – | |
| Gene3D | 40 | 312 | 273 | 7.2E-69 | – | |
| Phobius | 60 | 64 | 5 | - | – | |
| Phobius | 65 | 82 | 18 | - | – | |
| TIGRFAM | 69 | 363 | 295 | 5.2E-30 | ||
| Phobius | 83 | 231 | 149 | - | – | |
| Pfam | 111 | 295 | 185 | 3.5E-33 | – | |
| SUPERFAMILY | 111 | 215 | 105 | 3.53E-25 | ||
| PRINTS | 229 | 245 | 17 | 3.2E-29 | ||
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 232 | 251 | 20 | - | – | |
| Phobius | 252 | 262 | 11 | - | – | |
| Phobius | 263 | 287 | 25 | - | – | |
| Phobius | 288 | 658 | 371 | - | – | |
| SFLD | 298 | 650 | 353 | 0.0 | – | |
| SFLD | 298 | 650 | 353 | 0.0 | – | |
| SUPERFAMILY | 312 | 650 | 339 | 9.61E-33 | ||
| Pfam | 312 | 613 | 302 | 1.3E-14 | – | |
| Gene3D | 313 | 325 | 13 | 7.2E-69 | ||
| ProSitePatterns | 318 | 324 | 7 | - | ||
| Gene3D | 380 | 506 | 127 | 9.0E-71 | ||
| Gene3D | 507 | 644 | 138 | 9.0E-71 | ||
| TIGRFAM | 567 | 679 | 113 | 5.7E-24 | ||
| Gene3D | 645 | 754 | 110 | 9.0E-71 | – | |
| PRINTS | 658 | 673 | 16 | 3.2E-29 | ||
| TMHMM | 659 | 681 | 23 | - | – | |
| Phobius | 659 | 681 | 23 | - | – | |
| Phobius | 682 | 686 | 5 | - | – | |
| Phobius | 687 | 707 | 21 | - | – | |
| Phobius | 708 | 727 | 20 | - | – | |
| PRINTS | 708 | 721 | 14 | 3.2E-29 | ||
| Phobius | 728 | 752 | 25 | - | – | |
| PRINTS | 728 | 744 | 17 | 3.2E-29 | ||
| TMHMM | 730 | 752 | 23 | - | – | |
| Phobius | 753 | 763 | 11 | - | – | |
| TMHMM | 762 | 781 | 20 | - | – | |
| PRINTS | 763 | 784 | 22 | 3.2E-29 | ||
| Phobius | 764 | 782 | 19 | - | – | |
| Phobius | 783 | 793 | 11 | - | – | |
| TMHMM | 793 | 815 | 23 | - | – | |
| Phobius | 794 | 814 | 21 | - | – | |
| PRINTS | 813 | 834 | 22 | 3.2E-29 | ||
| Phobius | 815 | 819 | 5 | - | – | |
| Phobius | 820 | 844 | 25 | - | – | |
| TMHMM | 820 | 842 | 23 | - | – | |
| Phobius | 845 | 860 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium-importing ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mg2+(out) -> ADP + phosphate + Mg2+(in). | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0393900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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