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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0435900 |
| Transcript ID | LotjaGi4g1v0435900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I1K693|I1K693_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80900049..80905871) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGAAAAATCAAAGGAAATGAAAAGTTTGTGAAACTTAATCAATGAAAATGAATAAAATTTAAGTATGTATCGTAAGT GAAAAAAGTGGAAAATCAATTTATGGTTCTGAAAAATCGGAAAGTAGTACAGTAATGAGTCATTTACACTTCCTAGCGAC ATAGAAGGTGCTCAAAAAAGGACAAGGGAACGGAAATATAGCGGTAGGGACGTTTATCCTACCCTACTTTTACAAACTTT GAATCGCATCTCGTCCTTTTCAAAACCAAGTCTCCACAAACCCCTTACAAAAACGCGCTTTATCTAGCTTGCAATTGAGC TTCTTCATAATCGACACAGCACCAAACAAACACGCTCCATTCCGCTTCTCTCTGTAACCGTCGCCGGCGATCTGTTAGAT CGCGGCTGTAACCGTCACCGGAACTGATCCAACAACCACAGATCTGAAAATCCGAAATGGAGAATCTCATATCCCTTGTG AACAAAATCCAGAGAGCTTGCACCGCCTTAGGTGATCACGGTGAAGAAGCTAGTGCTCTCCCTACTCTCTGGGATTCCCT TCCTGCTATCGCCGTCGTCGGTGGCCAGGTACTGCATCCTCCCTCCGATCCTTCACCGATCCCTCACTATATATCTCTTC TCATAACATTCATTTCGTTTTTCTCTCAGAGCTCTGGAAAGTCCTCGGTGTTGGAGAGCGTTGTTGGCAAAGATTTCTTA CCTCGTGGATCAGGTAGGTCATCACTGTAGCTTGCTCTTTTTGCCTCTGTGATCTGTGCTTGTTATTGTTATTGTGATTG TGATTGGAAAACGTTTTTGCAGGGATTGTTACCCGGCGACCGCTCGTCTTGCAGCTTCACAAGATTGAAGAGGGTAGCAG GGAATATGGGGAGTTCCTTCACCTCCCGAGGAAAAAATTCTATGATTTTGGTAGGTTTTCTCTTGGCATTGTTTGATTTG TTTCTTTATCATTGCTTGTGAATAAAATTGTTATGTGTTGACAAGGTTTCCTGATTTGAATGTTATTGATCACTTTAGAT TTTTTTTTTCCAAGTGTGAATGTTAATGAATGATGATCTATATTTGTGTAGTTGCTGTAAGAAAGGAAATTCAAGATGAA ACTGATAGAGAGACGGGACGAAGTAAACAAATTTCAAGTGTCCCAATTCATCTTAGCATATACTCTCCCAATGGTTCGTT TATCTTCTTTTGCATCCTAGTTTTCGGTTTGGCATGTAATATGTACGTAGATCTGTTGGCATTGGCAACAATGCTTAGTA GGATCATTTCGCGATCTATTTGTTGGTTTCTTTTATTCGAGTTTTCAATTATTGATAAGCTCTTCGGCTTTTGCAGTTGT TAACTTGACGCTCATTGATCTTCCTGGACTTACGAAGGTAGCTGTAGGTACGTCACAAATAGACATGTCTTTTTGGTCTT TGATTTTAAGACAGATAAGTGGGAGTTCCTCAGTTTTTGTTTTTATGACGTGCATGATATTACTAGATTTTTATTGTGAA ATTACAGAGGGTCAACCAGATAGTATTGTCCATGACATTGAGAATATGGTTCGTTCGTTCATTGAGAAGGTAGTGTTCAT TCAAGTGCTAAAGCTTCTATTGAGAAATAATATGTTTGAGGAACAAACATTTCAAGCCTCTTACCTCCCTGCACTAAATT TACGATGCAATTTTAAAAACTTAATTTATGCTTCTATAGAATTTTTCTTATTAAGATGGTTAATGATGCAAAAAACTTGC AGTGTTATTTTTCTGAATGCCAGTTTTTTGTTTTTGTAACAACTGATGGTAGTAATTGATAGAATTTTTTGAAAAAAAAA ATGTCCATGTAGTAAGATTAGTATACTGAGTTTGATTTAATTTTGCAGCCGAACTGTATAATTTTGGCCATTTCACCTGC TAATCAAGATCTTGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGATCCTACTGGTAACTTCAATATTTTCTTTT CTTTTGCCTTTGATTACTCTTCATTTTGCTTGCAACTAGCGAAATCTTTTGTTGTTTCTCTAATTCTAGGTTTATTGCTT TCAACTTTTAGGTGAACGGACCATTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACGGACGCTGTTGATGTAA GTCCAATAATTTTTATTTCTAAACAAAAACATGCAATGACATGGGGATAATTCATTACTTGGTTAAAGATGCTCAAAATA TGGAAAAGGCGTTTGCAGATCTTTCATAATTCTACAGCATTATGTTTGAAATATAATTGGATGCCTCTCTTGAAAGCTGC TCTACTATCCATTCATTTAATGGTGAAAAGAGATGGGAGAATACCAATTATCAATCACCAGAATAGACTGTGAACTTTCC TTAAATATGAGCTTGATTTCAATTGACACTGAATTCTTTTTTATTCTTTAAGAGACTTAGACTTCCTTGATTTAGGATGG ATTCTGGATATAAGGTGTTAGCTTGAGTGTCCAACTGTCCATAAGGCTTGTGATTTCTCACGTTAAAGTATTACTTCTAC TGCATAATTGAAAATAGTTTCATTAATCCTTGCTCACCTCCTTTCAAGTATTTGACATTGCCCTGAAGAATGGGCAAATG TCATATTCCATGAAAACGAAGAATATTAAATGCTTATACTTGATTCAGTACTGATCTGTTATATATACTTTTGCGTTCTC AGATATTGGAAGGAAGAGCATACAGGTTAAAATTTCCCTGGGTTGGTGTTGTGAATAGATCACAAGCAGATATAAACAAG AATGTTGACATGATTGCTGCTAGGCGTAGAGAACGCGACTACTTTTTAACTACCCCTGAATATAAACACCTGGCTAAGAG AATGGGTTCTGAGCATCTGGCAAAAATGCTCTCAAAGGTACATGTGTAACAAATTATAGCATCAGTTGGCCATAGTTTTA TGTTTTTGTGTAGTTATTGTTTCAGTGGCTTCCCATGACTAAGTCTTAATGCTTATATCTCAGCATCTGGAGACGGTAAT CAAATCCAAAATTCCCGGCATTCAGTCTCTTATTAACAAAACTATTGCGGAAATTGAATCTGAACTTTCTCGTTTAGGGA AGCCAATTGCAGCGGATGCTGGGGTAAGTTTGCTCTTTGCTCAACCAATTTACATTATCAGTTTCAAAATCTTTGGTAAT CTATGTGAGTCCACACTGCCCTATACTTCTTGTATTTCCCTCTTATTCTGCCAAAATCTTTGGTAATCTATGTGAGTCCA CATATGCATATCCATCCCCACTATATGTCCATTGATTTTGATGAATTGATCTTATTTTTGGTAGCTCTGGTGATAAGATG ATAGCATGGCAGTTCATGTTATCGGATCCTAATTTAGTGTATCATATTGGAATTCTCTAATGACTGATTACAAATCACCT GCAGGGCAAGTTATATGCAATCATGGAAATATGCCGCTCGTTTGATCAAATATTTAAAGATCATCTTGATGGCGTGTATG TCCTATCATAACAATATAATATGTCATTCCTTTGTTTCAAAATTATCATTGTTTCGCTAACTTCATTAATATGCCAATCT CCTACAGGCGGCCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTGCAGCTTTGAAAAGGTTGCAATTT GATAAACAGCTTTCAATGGAAAACATAAGGAAACTTATTACAGAAGCTGATGGGTATCAACCACATCTAATAGCTCCAGA ACAAGGATACCGTCGACTCATTGAATCTACCCTGATCACTATCAGGGGCCCTGCTGAGGCAGCTGTTGATGCGGTACTAT TTCCATTAGAGAATTAATAACAATTGGAATTTCACCTCTGATAGTCACTCCTTTCAATGGAAATTTATTTGTGTCCAAAA ACTTCTTTTGAGATCTTTTGTGGTGGTGGAAAGCATTTTGTGAAATAAAATACATCATTGAAGTGCACCGCTTAGTCCTT TTCGTATGTGTTAAAACTTAACCTCAGCTTTAACCTAGTCGAAAGCCTGTAAATTGGTGAATTTTTTTCAAATTTGATAT TTTTTATGCATTATACGATTTTGTCATAAATGATTTATTTATGCATTTTACTTTAATCTTTTTCTGATCTCACTGTTTAT GCTTATTGAAGTGTTATTTTGTATTAATGCTGCCAGGTTCATTCCCTACTAAAGGACTTGGTTCACAAAGCTGTTAGTGA GACTCTGGTATGTTCCTGTTGATACATAAATATTTCTGCTGTGTTTTTTGCTGCTTCATTCGTCCTCAACTAGTTTCATA CTAGGTGCACTGATTTTGCCACGGTATTCTTGTGACTGTTGATATCATTTCAATGCTTCAATTTTAGAATTTGAAAATAA GCAAAGTTTTGGGGTTTTCTATGATCGAGTGTTCCAATATGTATGCTCTAGATGATGTTGCACAGTAATAACTAACAGAG TATTTGCTCTGAGAAAAGGGTTTCTAAATGTTTTGCCATAAATTTTGGAAAACAAAAATCAATTTGACATGTAGTCTTTG TTTTTGTATGAAATGAACCTCTTGTTTGTCATCAGATGGATTTCTTTTCGTTCATCCTAACTTATATGGGGTTCACAGTT TTCCCGTACATAAAGAGTTGGTTTGGTTGATTCGCAGGACTTGAAGCAATATCCTGGTCTGCGGGCTGAAGTTGGGGCTG CAGCTATTGACTCACTAGAAAAAATGAGGGACGAAAGCAAAAAAGCGACACTACAGCTGGTTGATATGGAGTATGGCTAT CTGACAGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTAGATAAGGGTGGCAATCCCACACATTCAATTTTTGATAGATA TAATGATTCATATCTAAGGCGAATTGGTAAGTCTTCAAAAACAGTCTCACTCTGTCTTAGACTGATATTACAACTTTGTT CTAACAGTTTAGCATGTCCTTCGTCTTCGAAATACATTGTACTAATGACTGCTTCATTCTCATTCTGTATAAACAGGAAC CACAGTTTTGTCTTATGTCAATATGGTCTGTGCTACTCTGCGGCATACAATTCCAAAGTCAATCGTCTATTGTCAAGTGC GGGAGGCAAAACGAACTCTACTTGATTACTTTTTCACTGAGCTAGGCAAAATGGATGTGAGAATAAATCTGTCTTTTCAA AATTTATGATTATGCTTTCATTTTTTAACAAACTTATTCAAAAACGAAAAATCATTGAGCTGTTTTCCAGTTGGTTTTAA AATTTGCCTGCATAAACCCTCTTTGCAGATGAAGCGTTTGTCCTCATTACTGAATGAGGATCCTGCAATTATGGAACGAC GTAGTGGCCTAGCAAAGAGACTGGAGTTATATCGAAGTGCACAAGCTGAAATAGATGCAGTTGCTTGGTCAAAGTAAATG CGTATTTGCATTTGTTGATCACGTTTATAGGCAGCAGTATTACCATTTCACGTCCATTCTTCATACTCATTTTTCAGATT GACATTTTAAGTATATAGTATCTGTACTGTCATCTTCATCTGATTTTGATAGAAGAAACATATTTTTTTTGACTCTGAGA GTTGAGTGCTTTTACGCTCTATATAGATCTTTCACTTTTCAGTCTTTCCAAGTATCAATTGACCAATCTATTTATTTATT TCCAAACAAGTTGTGAATACAACAGGGTAAATTTTTCTAAGTAGGTTCTGATGTGAAGTTTATGCCCGTGATAGACAAAT AACAATGAGCTCTGGCTTTGGCCCTCCTTTTAACAAAAAAAAAGAGCTCTGGGTGGAATGGAG
CDS sequence (LotjaGi4g1v0435900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATCTCATATCCCTTGTGAACAAAATCCAGAGAGCTTGCACCGCCTTAGGTGATCACGGTGAAGAAGCTAGTGC TCTCCCTACTCTCTGGGATTCCCTTCCTGCTATCGCCGTCGTCGGTGGCCAGAGCTCTGGAAAGTCCTCGGTGTTGGAGA GCGTTGTTGGCAAAGATTTCTTACCTCGTGGATCAGGGATTGTTACCCGGCGACCGCTCGTCTTGCAGCTTCACAAGATT GAAGAGGGTAGCAGGGAATATGGGGAGTTCCTTCACCTCCCGAGGAAAAAATTCTATGATTTTGTTGCTGTAAGAAAGGA AATTCAAGATGAAACTGATAGAGAGACGGGACGAAGTAAACAAATTTCAAGTGTCCCAATTCATCTTAGCATATACTCTC CCAATGTTGTTAACTTGACGCTCATTGATCTTCCTGGACTTACGAAGGTAGCTGTAGAGGGTCAACCAGATAGTATTGTC CATGACATTGAGAATATGGTTCGTTCGTTCATTGAGAAGCCGAACTGTATAATTTTGGCCATTTCACCTGCTAATCAAGA TCTTGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGATCCTACTGGTGAACGGACCATTGGAGTTTTGACAAAGA TTGATCTTATGGACAAGGGTACGGACGCTGTTGATATATTGGAAGGAAGAGCATACAGGTTAAAATTTCCCTGGGTTGGT GTTGTGAATAGATCACAAGCAGATATAAACAAGAATGTTGACATGATTGCTGCTAGGCGTAGAGAACGCGACTACTTTTT AACTACCCCTGAATATAAACACCTGGCTAAGAGAATGGGTTCTGAGCATCTGGCAAAAATGCTCTCAAAGCATCTGGAGA CGGTAATCAAATCCAAAATTCCCGGCATTCAGTCTCTTATTAACAAAACTATTGCGGAAATTGAATCTGAACTTTCTCGT TTAGGGAAGCCAATTGCAGCGGATGCTGGGGGCAAGTTATATGCAATCATGGAAATATGCCGCTCGTTTGATCAAATATT TAAAGATCATCTTGATGGCGTGCGGCCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTGCAGCTTTGA AAAGGTTGCAATTTGATAAACAGCTTTCAATGGAAAACATAAGGAAACTTATTACAGAAGCTGATGGGTATCAACCACAT CTAATAGCTCCAGAACAAGGATACCGTCGACTCATTGAATCTACCCTGATCACTATCAGGGGCCCTGCTGAGGCAGCTGT TGATGCGGTTCATTCCCTACTAAAGGACTTGGTTCACAAAGCTGTTAGTGAGACTCTGGACTTGAAGCAATATCCTGGTC TGCGGGCTGAAGTTGGGGCTGCAGCTATTGACTCACTAGAAAAAATGAGGGACGAAAGCAAAAAAGCGACACTACAGCTG GTTGATATGGAGTATGGCTATCTGACAGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTAGATAAGGGTGGCAATCCCAC ACATTCAATTTTTGATAGATATAATGATTCATATCTAAGGCGAATTGGAACCACAGTTTTGTCTTATGTCAATATGGTCT GTGCTACTCTGCGGCATACAATTCCAAAGTCAATCGTCTATTGTCAAGTGCGGGAGGCAAAACGAACTCTACTTGATTAC TTTTTCACTGAGCTAGGCAAAATGGATATGAAGCGTTTGTCCTCATTACTGAATGAGGATCCTGCAATTATGGAACGACG TAGTGGCCTAGCAAAGAGACTGGAGTTATATCGAAGTGCACAAGCTGAAATAGATGCAGTTGCTTGGTCAAAGTAA
Protein sequence (LotjaGi4g1v0435900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENLISLVNKIQRACTALGDHGEEASALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKI EEGSREYGEFLHLPRKKFYDFVAVRKEIQDETDRETGRSKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIV HDIENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVDILEGRAYRLKFPWVG VVNRSQADINKNVDMIAARRRERDYFLTTPEYKHLAKRMGSEHLAKMLSKHLETVIKSKIPGIQSLINKTIAEIESELSR LGKPIAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPH LIAPEQGYRRLIESTLITIRGPAEAAVDAVHSLLKDLVHKAVSETLDLKQYPGLRAEVGAAAIDSLEKMRDESKKATLQL VDMEYGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCATLRHTIPKSIVYCQVREAKRTLLDY FFTELGKMDMKRLSSLLNEDPAIMERRSGLAKRLELYRSAQAEIDAVAWSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 611 | 611 | 0.0 | – | |
| PANTHER | 1 | 611 | 611 | 0.0 | ||
| SMART | 1 | 252 | 252 | 4.7E-116 | ||
| Gene3D | 2 | 320 | 319 | 7.1E-118 | – | |
| SUPERFAMILY | 30 | 309 | 280 | 1.52E-71 | ||
| ProSiteProfiles | 32 | 301 | 270 | 58.634 | ||
| CDD | 34 | 301 | 268 | 2.29601E-130 | ||
| PRINTS | 35 | 53 | 19 | 2.8E-61 | ||
| Pfam | 38 | 214 | 177 | 3.5E-54 | ||
| PRINTS | 60 | 77 | 18 | 2.8E-61 | ||
| ProSitePatterns | 61 | 70 | 10 | - | ||
| PRINTS | 133 | 150 | 18 | 2.8E-61 | ||
| PRINTS | 183 | 201 | 19 | 2.8E-61 | ||
| PRINTS | 202 | 218 | 17 | 2.8E-61 | ||
| Pfam | 223 | 490 | 268 | 3.7E-64 | ||
| PRINTS | 225 | 244 | 20 | 2.8E-61 | ||
| Gene3D | 326 | 577 | 252 | 8.0E-49 | – | |
| SMART | 514 | 607 | 94 | 6.9E-36 | ||
| Pfam | 515 | 607 | 93 | 5.8E-21 | ||
| ProSiteProfiles | 519 | 611 | 93 | 18.93 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0435900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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