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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0457600 |
| Transcript ID | LotjaGi4g1v0457600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin; TAIR: AT1G14830.1 DYNAMIN-like 1C; Swiss-Prot: sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C; TrEMBL-Plants: tr|G7LBF4|G7LBF4_MEDTR Dynamin-like protein 1E; Found in the gene: LotjaGi4g1v0457600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82886459..82894088) extracted from Lotus japonicus Gifu genome v1.2.
AAGGAGAGGAACATACAAAATAGAATTCAAATATTGTGGAATGTGGATGTCATGTCAGAGCTCAATAATCTTGGAATGGT GACTTTAGAACTAACTAGCTGTTACGTTAAGGACATGTGTGAAGTGACCATTTACCCCAATCACCATTCACCCCCAACAT GAAATGAAATAAAAATAAACAAAGTACCGTTTAATTTATTTATTTATTTATTTATTTTGAGTTTGGTATCTTCGTTTTGT CCGTGCATTTGCATTCTCTCTAGTTTCCATATTTGTTTCTGTTGCGTTGCGTTGTGTTGATGTCTGAACGCGCATTCCAC ATTTCAAATTAACTCATCTCGCGATTCACATCATCATCGTCTTCATTCCTTCCCAATCTCAATCTCACTGATCCATCCGA TTTCCTCTGATCCGATCCGATCCGTGTTTTTCCCCTCGGATCCATCCAAAAATGGCGACGATGACGAGCTTGATCGGTCT TATCAATAAGATCCAACGAGCCTGCACCGTCTTGGGCGATCACGGCGGTGAGGGCTTGTCCCTCTGGGAGGCTCTTCCCT CCGTCGCCGTCGTCGGTGGACAGGTATCTTCTATCTTCTTCTTTTCCACCTCCTTTTTCAAACCATAACTAGCAATGCTT TTGTATTTCTAACTCCTTTGTATTTTTTATGTGGAATGTTAATCTCAGAGTTCAGGGAAATCGTCAGTGCTGGAAAGTGT GGTCGGAAGGGATTTTCTGCCTCGTGGATCTGGTAATCTCACCTCACTCTCTTTTCATACTGTTTTCTGCATTTCATCAT CGAGATCTATTCAGCAATCACAATGTAGTTCAATAACTAGTAAACAATATATGTCAACTTCAAACTCTTTTCACAAGCTT CTCAGCTGATGAATTATCGCTTACACATATTTGAAAGTTATTTTCAGCTTATTTCAAAAGACATCCCAAATAAGCTTATG ATTAAGTTCATATGTGATAAGCTTATGGATCCATAAGCGCTTAGTTAAATTGTTTACCCAAACATATAGATATATAAGAA AGGATGCTATGCTGGGTTAGTGGGTAGTAGTAGTAGTGGTTACTGTTTAGGTTACAAAATGCTTCAAAGTTGAGGTGAAC TATTACCATCCAGCTTGATACAGGAGTTGTTTGTTGCTAGTTTAACAAGTTTTTGATAAATTTTAAGTTTACTGCAAATA GCTGCTCCTAGGTGATCAATGACTGTGGTCCTTTTTTTTTTCTTCGTGCATTATTATTTCATTGATGGCAGTGGGAGGGT GATTGCTTTTGTTTCCCTGAATGAATGGCTTTATGACGTTGTCTTTCACTGTTTGTATTGGAAGGTATTGTAACACGGAG GCCGCTAGTGCTGCAACTTCATAAGGTCGAACAAGGGCAGCAGGAGTATGCTGAGTTTCTTCACATGCCAAGAAAGAAAT TCACAGACTTTGGTAAATGAAGTTGTTAACCAAGATATTTCCTGTTTCTGTTTCACTAAGATGTGCAATAATGAGTAGCT AGCATCGTGTATGGCTGCTTAAATAATCTTCATTTCGTTTTATAGTAATATGCTATCATCAGCCAAAGTAGACTTCATCG AGCTTAATGGATAATTTACTCTTGTAGAGGGTGGTAGATTTATCCACTTGTGTAAAAAATTTACCAGTTATTGGTAGGTT ACAACAAAAATTCATTCCGTTTCTGACAAACCTGAGTTTCGAACTGGGAATGATTTATAATACTCACCACATGTCTTGAT AATTGAGGCTACAATTATGGTTGGGAAAGATGTAAAACTCTGAAGGATTTATGATGTTTGTGGTTGGGGATTTAGAATGT TTGTGGTTGGGGATTTACAATGTTTGTCTATGTGTCCATTGTTCAGTATGGCTAACAAGTAACACACGGTTGCAGACTTG CAGATGCATTAGTTTATTCTTTGTAGATTCCAAACCAAATGGTTTTCTTATGTTCCTTTAATGCCCATGCAGCTGCTGTG AGGAAGGAAATAGCAGATGAAACAGATCGTATAACTGGAAAGACAAAAGCAATTTCTAACATTCCAATTCAACTCAGCAT TTATTCGCCAAATGGTTTGTATTTGCATTATCCATTTATAACATTGATAGATTAAACTTGGAAGCAATTTGATTGAGGCC TTATCAAATAGTGTAATATTGCCTTGTATGTATTTTTACGATTTAGGAATGCTAGTAACATCCTCTCAAATACTCTATTA TTTGGTAAAATCATGTGATCCCTCTAAATTATGTAGGTCCCACTCACTATTTAATGTGAACAACTCCCTATTTGGAGAGA TCCATATGATTTTCTCTTTTATCTCAACATCTTCATGGCGTGTTGCACTTGCTGGTTATCTGGAAATAATAATTTCTTTT GGCTGAAAAACATGAAGTTTATCTTTTAATTTGCACCCTCCCTGTTGGGAAATGGGAATACAAAAGAGACATATTTTCTT CTTCACTAATAATGCCTTCTTTCCATATGACTCTATGGTTTGAGATATTAGATTAATGATGATTTTTTGGGGCTTTTTCT GCAGTTGTGAACTTAACCCTCATAGATCTTCCTGGGTTGACGAAGGTTGCAGTAGGTAAGCCTTAATATATTTCCCAGTA CTATATACAAATTGAGTGGCATTTTGAGAAGACTCATCAGAATTTCTAATGTATAATGAAATTTTGGCTTCTTTGACAGA GGGACAACAGGACAGTATTGTTCAAGATATTGAAAACATGGTCCGTTCGTATATTGAGAAGGTAACTATACTCTAGAGAT ACAATTTAAAATTTAATATTGAACAAGCACGATATTGAGAACTTAAACATGGTCCCTTTCTATTGTATTTTTTCCCAGAT TCTTAACTGATTCGTAACATTTACCTCTCTGATGTTTCTCATAAACTATCTAATTGAGTTCTTTGATTGTGTAGCCAAAT TGCATTATCTTAGCTATTTCTCCTGCCAATCAAGATATTGCCACTTCAGATGCCATAAAAATTGCAAGGGAAGTTGATCC TTCAGGTATGGTTGTCTATGCTGCATGGAATTCCAAGAAACACTATGTTTTTCCCAATGTCTTTTTTTTAATTTCTTCTT TTATTATTATTTCAGGTGAAAGAACATTTGGTGTGGTTACAAAACTTGATCTTATGGACAAAGGAACAAATGCAGTTGAT GTATGATTTCTATAACAACTGCATGATTATCTTCTGTTTTGGTCTTCAATAACTTCAATTGATTTCAATGTAATTAAGTG TGAACTTATAGTTTATCAGTGAGTGTAAATTGATGGGTGTTATTCATGTGAATCTTGAAGGTTCTTGAGGGAAGGTCATA CAGACTGCAGCACCCATGGGTTGGAATTGTGAATCGTTCACAAGCTGATATTAATAAAAATGTTGATATGATTGTTGCTC GTAGAAAGGAACGTGAATATTTTGAGACAAGTCCGGAATATGGACATTTGGCACATAAAATGGGCTCAGAATATCTTGCT AAGCTTCTATCTCAGGTATTTTCATTAGTTTTTTTTTTGATAGGCATTTTTATTAGTATTTTCTATTTCATTCCAGTCAT TTTCTCTAGCATTTTTATTATGTTACTAAACTTACTATTGTTAAATGGTTTTCTAATTCATTCTATGATCACCGACTTTC TTTCCTTTCTTTAACCGCCTTTTATGACTTCAGCATTTGGAACAAGTTATCAGGCAGAAGATACCTAGTATCATTGCCTT AATAAACAAGACCATTGACGAGCTTAATGCCCAGTTGGACCTTATTGGCAGGCCGATTGCTGTGGACTCCGGGGTCAGAA CTGAGATCTGAAATTAATTTTCTTAGATTTGAAAGTAGTCGATTCCTGGTTGTGCATGTGAACTAAATTGTGCTACTTGT TTATGTAGGCCCAACTATACACCATTTTAGAGATGTGTCGTGCTTTTGACAAAGTATTTAAGGAACACCTAGATGGAGGG TAAGTTCTGTATTAAGTCTTAGCATTACCTTGTATTATGCAATTGTTTTCTTTTCCAAAGAATGAATTTATACGTTATTT TTCCTGCTTATACTGTTAACCTTTGGAGCTAATCTAATTGATTACGTCACCAACTGCTATTTCAGACGTCCTGGAGGTGA TCGGATATATGGAGTTTTTGATCACCAATTACCAGCTGCTTTAAAAAAACTCCCCTTCGATCGTCATCTGAACTTAAAAA ATGTGCAGAGAGTTGTGACAGAAGCTGATGGGTATCAGCCCCATCTCATTGCTCCAGAACAGGGTTATAGAAGACTTATT GAAGGGTCTATCGGCTATTTCAAAGGCCCAGCTGAAGCTTCTGTGGATGCTGTAATCTTCTTAACTTTACTATATTTTGC TACAGACTGTCATTCTGTTTCTTGGTCTCTTACTCCTACGTGGTAGAATTACAAGATATTAAATACTTGGTTATATAAAC ATCCTTCACCTTTACGTGCTTTGTATTCTTTTCAAAAGAATGCTTTATCTCCTTTCAAGTGGTACATCTTTTCAGTCTAA GTCATGACAAGAGGTGATTTTGAAGGACTTCAAGACCAAATGTTATTCTTTTAAATCATAAATTATCATGAGCATACAAA TCCATCTATCAAGAATGTCTTCATAATTTCCTCTTCTTTTCCACCACATCAGTCCAAATATGGTCATTGGTAAAACTGAA TTTGCATGCTCCTAAAATCCTGCTGTCAAATTCATTTTGCTTACTCCTCTTTTCTGATGATAGATCATTTCCCAAAGTTG GAATACAGTTGTCTTCAATTCCAAAAACCGTAACTTTGAAATCAGCTTTCTTCGTACCCATTGTGGTATTTGGCAGGCTT CAGTCTATCACATGATGACTTTTTACCAGTGTTTTTTATTCTCCTTTTCTTCCTGTTACTGAATGAAAGAAGGAAGAACT TACTCTGCAAAAAAACGGTTTTCGTCATTCACATTTTATGTAACAACCATTTGTTTACTTTTTCTTGTTAAATTGCCTGG TAAGATTATGTTCTTTGCATTTGTTAATTACATGATTTCTGCTTCTATTCTTCAGGTCCATTTTGTCTTAAAAGAACTTG TACGGAAGTCAATTGCAGAAACTGAGGTAAGCAATATTAATATAACTCTTTCCGACAAGTCATTTTTTCAAATGAATAGT TCTAAATCCTCCCTACTTCCTCCTTCTATTTACTAAATGGAGAAAGTATTGAATTTTTTTATATTTCCATTAAATCATAT GCATTTATTTTTTCATTTAATATATTCTTTATATAGTAGAAGGAGGATTTGTAGGAATATACATAAAAGAGTATAACATT GTTCTTTTCTAATATATGCATGCAAGTTGGATGAGACTGTTCTTATTCAACATTTAATTCATCTCTGTCAGTGTTGATTA TGGTGTTTCTTTTCTTCGAAGAAAAAATTAGTGAATGTTCAAGAGATAATGATGCTGGACATTCATATCTTAGCACTAAA TAACTGATATTAGGTGCCCGTCTCAGGCCTGTAAATAGTACCTGGGAACATTCACTTTAGGTTTTGATGGGCCGCCGTAA TATTTTTTATTTTTTTTGGGCGTGGGGAGGACACGAGGAAATGAATCTCACAGGTGTGCAAATTCATGTCATGTAGGAAT TAAAAAGATTTCCTACGCTTTCAAATGATATAGCAACCGCTGCAAATGACGCTCTAGAAAGATTCCGTGACGAAAGCAGG AAGACAGTTACACGGTTGGTTGATATGGAGTCTAGCTATCTTACAGTGGAATTTTTCAGGAAGATTAATCTTGAACCAGA AAAGAATCCAAACGGACCACCAAATGCAAATCGGAATGCTCCTCCCCCCACTATGGACAATTATACTGACACTCACCTCC GCAAGATTGGTACATAGTGTTCTACAAGCCTTCTCTCAACATTTACATCCTTTATGAAAAGTAAAGGCTGTTTTAATTTA TTCGTCATATTCCTACTTATTTTGGATTTTGTTCGACACTGTTTAAGCTGATCTGTAAAGTTGGACATTGATTATTCTGT TTGTTAAAATATATCATGCTCCTTGTTTCAGGATCAAATGTAAATGCATATATTAACATGGTCTGTGATACGCTTAAGAA TACTATACCAAAGGCCGTAGTTTATTGTCAAGTTAGAGAGGCCAAGAGATCATTGCTGAACTACTTCTACGTTCAAGTTG GGAAGAAGGAGGTATGATTTTATATCTTTTGGTTAAATTTTTGCCATCTTAGACACAATTTCCTTTAAGCTGTTCTTTTC ATGGTATAGATAAGGACTTGTGTTGGGCTAGCTTGAGTTTACTTATATAATTATATTACAAGTTTGTATATCCATGGAAA ACTTAATGAACTTGGTCCAAGTATCTTGGAGAGCTTACAAATTGATTGTTTGTTTGTTCATATCACGGAGAACGTGTAGT AAACGCCGGATGCGGTGAATCTAATTATTTCACCAGATTAAATATTTGAATCTATTGATAGAGATATGGACATGGTAAAA CATTGGCCATGAAGTTACTATCTCTATCATTTAAGGCTCCCCGGGTATTTATACTATTGAACCATGTTTAGTACACTGCC CATGTGGAGTATAAGTATTTTGTGGAAAAGACAATAGAAAGCTGGCTACTTTCCTTTTTAAGATTGTTTAAGCAAGATAT AGCATGTCCGGATCAGCTTGCAATTTTGACAACCAGACACATAAGCTTCTCCCCATAATTAATTTTGCCTTTAGAATCAA CTGTAGATGGATTTCCAAACATGTACAAAGTCAGACTCAATATTAGCGATTTGTCTTGCTTGTTGGTGTAAGATTGATGA AAGCATATGTTGATTGCAACATTGTGTGTGGTAAGAACTGATTTTATGAGCTAATTGTGCAGAAGGAGAAATTGGGAGCT ATGTTGGATGAAGACCCAGCTCTTATGGAAAAGAGAACACAAATAGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGA TGATATTGACTCCGTGGCTTGGAAATAAGGAAGATCCCACGTTTTGCAACAGATACTATGACGAAGATTTGTAATAGATT TTTATAATTTCCATTATTCTTTTCTAATTGAACTCAAACAGAGAAGTCTTACGGCAAGTTGATGTTTGCTTGCATATAAT TCTTTTGCCCTAGTGTACAAAGCCTGAGCTCTATGTTGTGATTTTATTGTTTTATATAACTAACGAGTTGTTGGTTATTT ATTATGTTCGGTTTTCTTACCACATTGATTAGTTTCGAAGAGCTTTCCATTATGTGTAATTCTTTGCTATGTGAGTCAAT AATCTGGAATAGGTGACATGCAAGTTTAACAAAATTTGTCACAATGAAAATCTACGAGACCACTTGCTTAGCATAGCAAT AATCTAGTTGGTAGGCTAGAAATGGATAAATTATTAAACAAGCTAGCCTTTATAGTCTTATTAATTTCTAATATTGTATT TTTAATATTATCTTTTTCTAGTAAGTCCTTGTAGTTTAAGATCGTTTTGCTCAAATTACATTAGTGATGATGATGAATTG TTGCATCTGTAATTGAAAAGGACCAAATTT
CDS sequence (LotjaGi4g1v0457600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACGATGACGAGCTTGATCGGTCTTATCAATAAGATCCAACGAGCCTGCACCGTCTTGGGCGATCACGGCGGTGA GGGCTTGTCCCTCTGGGAGGCTCTTCCCTCCGTCGCCGTCGTCGGTGGACAGAGTTCAGGGAAATCGTCAGTGCTGGAAA GTGTGGTCGGAAGGGATTTTCTGCCTCGTGGATCTGGTATTGTAACACGGAGGCCGCTAGTGCTGCAACTTCATAAGGTC GAACAAGGGCAGCAGGAGTATGCTGAGTTTCTTCACATGCCAAGAAAGAAATTCACAGACTTTGCTGCTGTGAGGAAGGA AATAGCAGATGAAACAGATCGTATAACTGGAAAGACAAAAGCAATTTCTAACATTCCAATTCAACTCAGCATTTATTCGC CAAATGTTGTGAACTTAACCCTCATAGATCTTCCTGGGTTGACGAAGGTTGCAGTAGAGGGACAACAGGACAGTATTGTT CAAGATATTGAAAACATGGTCCGTTCGTATATTGAGAAGCCAAATTGCATTATCTTAGCTATTTCTCCTGCCAATCAAGA TATTGCCACTTCAGATGCCATAAAAATTGCAAGGGAAGTTGATCCTTCAGGTGAAAGAACATTTGGTGTGGTTACAAAAC TTGATCTTATGGACAAAGGAACAAATGCAGTTGATGTTCTTGAGGGAAGGTCATACAGACTGCAGCACCCATGGGTTGGA ATTGTGAATCGTTCACAAGCTGATATTAATAAAAATGTTGATATGATTGTTGCTCGTAGAAAGGAACGTGAATATTTTGA GACAAGTCCGGAATATGGACATTTGGCACATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTATCTCAGCATTTGGAAC AAGTTATCAGGCAGAAGATACCTAGTATCATTGCCTTAATAAACAAGACCATTGACGAGCTTAATGCCCAGTTGGACCTT ATTGGCAGGCCGATTGCTGTGGACTCCGGGGCCCAACTATACACCATTTTAGAGATGTGTCGTGCTTTTGACAAAGTATT TAAGGAACACCTAGATGGAGGACGTCCTGGAGGTGATCGGATATATGGAGTTTTTGATCACCAATTACCAGCTGCTTTAA AAAAACTCCCCTTCGATCGTCATCTGAACTTAAAAAATGTGCAGAGAGTTGTGACAGAAGCTGATGGGTATCAGCCCCAT CTCATTGCTCCAGAACAGGGTTATAGAAGACTTATTGAAGGGTCTATCGGCTATTTCAAAGGCCCAGCTGAAGCTTCTGT GGATGCTGTCCATTTTGTCTTAAAAGAACTTGTACGGAAGTCAATTGCAGAAACTGAGGAATTAAAAAGATTTCCTACGC TTTCAAATGATATAGCAACCGCTGCAAATGACGCTCTAGAAAGATTCCGTGACGAAAGCAGGAAGACAGTTACACGGTTG GTTGATATGGAGTCTAGCTATCTTACAGTGGAATTTTTCAGGAAGATTAATCTTGAACCAGAAAAGAATCCAAACGGACC ACCAAATGCAAATCGGAATGCTCCTCCCCCCACTATGGACAATTATACTGACACTCACCTCCGCAAGATTGGATCAAATG TAAATGCATATATTAACATGGTCTGTGATACGCTTAAGAATACTATACCAAAGGCCGTAGTTTATTGTCAAGTTAGAGAG GCCAAGAGATCATTGCTGAACTACTTCTACGTTCAAGTTGGGAAGAAGGAGAAGGAGAAATTGGGAGCTATGTTGGATGA AGACCCAGCTCTTATGGAAAAGAGAACACAAATAGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGATATTGACT CCGTGGCTTGGAAATAA
Protein sequence (LotjaGi4g1v0457600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKV EQGQQEYAEFLHMPRKKFTDFAAVRKEIADETDRITGKTKAISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQQDSIV QDIENMVRSYIEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRSYRLQHPWVG IVNRSQADINKNVDMIVARRKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAQLDL IGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDRHLNLKNVQRVVTEADGYQPH LIAPEQGYRRLIEGSIGYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLSNDIATAANDALERFRDESRKTVTRL VDMESSYLTVEFFRKINLEPEKNPNGPPNANRNAPPPTMDNYTDTHLRKIGSNVNAYINMVCDTLKNTIPKAVVYCQVRE AKRSLLNYFYVQVGKKEKEKLGAMLDEDPALMEKRTQIAKRLELYKQARDDIDSVAWK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 617 | 617 | 0.0 | ||
| PANTHER | 1 | 617 | 617 | 0.0 | – | |
| SMART | 4 | 252 | 249 | 1.4E-112 | ||
| Gene3D | 5 | 319 | 315 | 2.1E-118 | – | |
| SUPERFAMILY | 7 | 309 | 303 | 1.57E-73 | ||
| ProSiteProfiles | 32 | 301 | 270 | 59.045 | ||
| PRINTS | 35 | 53 | 19 | 1.1E-59 | ||
| CDD | 35 | 301 | 267 | 9.49929E-133 | ||
| Pfam | 38 | 213 | 176 | 2.7E-55 | ||
| PRINTS | 60 | 77 | 18 | 1.1E-59 | ||
| ProSitePatterns | 61 | 70 | 10 | - | ||
| PRINTS | 133 | 150 | 18 | 1.1E-59 | ||
| PRINTS | 183 | 201 | 19 | 1.1E-59 | ||
| PRINTS | 202 | 218 | 17 | 1.1E-59 | ||
| Pfam | 223 | 489 | 267 | 3.8E-60 | ||
| PRINTS | 225 | 244 | 20 | 1.1E-59 | ||
| Gene3D | 327 | 582 | 256 | 5.2E-54 | – | |
| MobiDBLite | 498 | 518 | 21 | - | – | |
| SMART | 522 | 615 | 94 | 2.0E-32 | ||
| Pfam | 523 | 615 | 93 | 1.9E-24 | ||
| ProSiteProfiles | 527 | 618 | 92 | 20.893 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0457600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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