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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0035100 |
| Transcript ID | LotjaGi5g1v0035100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger CCCH domain protein, putative; TAIR: AT1G10320.2 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9SY74|C3H5_ARATH Zinc finger CCCH domain-containing protein 5; TrEMBL-Plants: tr|A0A178W6J5|A0A178W6J5_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0035100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:5783113..5798919) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGCGAATGATGCTACCGGCACCCATCAAATTTTTTTTTGAAAGGCACCCATCAAATTGATTTAAACTAAACCAATAA TAAAAATTAAAAAGAAAAGAAAACAAAGGTTGATATACCAAAACCCAAACCCATATTCAATTTTTTGTTTTGTTTTCCGA AATTAAAGAGTGAAATAAAAGTAGTATTATGGTCTAACCAAATATTATATCACGGAAAAGGGAGTGAGTGAAAGAAAAAG AAGAGAGCGATCGAGAGAGAAGGTTGGAGCGGTTGGTGTTGGAGGTCTTGGCCGCGATAGGGAAGGTGCTGCGTGCGGCG GAGCACGGAGGCCGTGAACGTGAAGGGTGAGTCATATCTCCGGCGCGGTGGCTGAACACCTTGGAGACATTGGTGAGCGC CGTTGGCTTTCTGGTTGGCAAGGTTCTGCTTAGGTTCTCTTCAACCTCTCTTTGTTTTGTTGGTGTAATGTTATGATTGT TTTCACGGCATGATTTTAATCGAGTTGGAAGATTTTAATCTGTACTCGCAATTGATTGGGAAGAGTTTTTTAATCTTTAC TTGCAACTAAAACAAATCAACAATCAATCAGTCACGTAGGGAAGCATTATTTTCAGATCAAATAGTGTAAAATATATAAT GGGGTGTGTAATTGGGTCTCTTGAAAATTTTGAATACTAAAAAGTAATTTTAATTGTGTATTTGTGTTAGAGCACTCAAT GAGGAAGAGCAGACTGCATAACACTTTTAGAGAGTTCTTTCACTTGTTTGGAAAGCATATACTCCGTTTTTGTGAATAGT GCTAGGAACCAAAAGTTAAGATATTAGGGATGAAGATGCTTAGACACCCGATTTTTCTCTCTACACATCACTTCGTACTT TACGTTTATTACTCATCTCTTTCCTCTTCTTTTCTCACTTTAGGTATCTACACTCCTGAGTAGTCTACCAAAGCATTTTC CATATTTGAGAGTGTTTATATTTAAAAACAGTGTTGATAGGTGACTGGACAACGGGAAAAAGGGCACAAAATTCCACAAG AAATACGGTTACATATGGCTTTTTTTAGAGTTTAGTTGTTTGTTCATTTGCTTCTTCTCATCTGTCACAACACTACTCTG CAGTCTGCACCAAGAAAAAAGTAATAGTTGAATGGAAGAAAATATGGAAGTGAGTGGAAGTGGAGGTCGAAAGGAGAAGA GGAAGGAAATGAAGAGATTGAAGCGGAAGCAGAAAAGGAAGGAGATGGCGGAGAAGGAGCGGATGGAGGAAGAGGCACGC CTTAACGATCCTGAGGAGCTGATGAGGCTGCAGTTGATAGAGCAGCAAGAAGCCGAGAGGATGGAAAAGGACAGGATTGC CTTTGACCAGAGAGAGAAGGCTTTCATTGAGACCATCAATCTCAACAAACAGCTTCAACTTCAACTTCAACAACAATCCC CCAAATCCAACCACAACACTGGTGTTGATGTTGATGTTGATGATGAGTACGTGGAGATGGAGGAAGAGGGGCCACCAGAG ATTATTTGGCAAGGGAATGAGATCATATTCAAGAAGAAAAAGGTCAGAGTTAGGGTTTCGGACAAGGAAGCCAATCCAAT TCATAGCCAGGTACGTTACTTAGTAATCTTAATCAACCAACATCATTACCTATTCTAATAATCTCTATTCTACTATATTA TATGAATGATGGTAAAATTGCAATTGCTTTCCTCGATTCTTCAGTATTCCATTAATAGCTTCACTTGCAGGAGCAGGGTG TCGTCGGTGATGATAGACCTACATCAAATCCCTTTCCCCCGGAATCTCAATCTCACACCAATTCAGCGGCGCTGCTCGAC AATGTTGCTCGACAAGTACCGAATTTCGGAACAGAACAGGTTTCCTCTGCCTTGCGCCCTTGCTTATTTATTTACTGTCA ATTTTCTCAATCATCATCATCACTCCTTACTCTTGTTTGTGTGCATGTCTTGCAGGATAAAGACCATTGTCCTTTTCATC TAAAAACTGGAGCATGTCGTTTCGGTCAACGTTGTAGCAGAGTCCATTTTTACCCTGACAAGTCCTGCACCATCCTGATC AAAAACATGTATAATGGTCCTGGCCTCGCATGGGAGCAGGATGAGGGCCTTGAGGTCTGTTCATTGTATCCTCAGTTGCT ATTTAACATTTTTCATAATTATTACTTCCTCCTCCCTACATTTCATTTCATTTGCACAAAGTTGGTGCGATTTGATTGCT CCAAATTCATTTTTCTTGATTATAAAAGTCTTCATCTAATAGTTGTCCCCATAAAGTAAAAGCACTCTTATTCAATTCTT TTCTTTTACTTATAGATATTTCTTTTATTCTTTGACTTTATAATAATCAGAGATTCATTGCAAGATACATTTTGGTGGAG GCTCATGATTTTTGCCTTGGTTGGTTTCAAGTTAAAGATATTACCTGTTGTATCCTACTTACTGAGCTTGGTTATCGGCT ATCACATATTGATCTGCTTCCCTTTAGTCTCTTAATCAATCTATTCTCTTGTAACTTTTTTTTTTCATTTGACTTCTTTG TTAATTTTACCTTTTCCTTTATTTCCGTTTATCATTAGATTCCTTTATTTGCAACCATTAGCATCATACTTTTCTGACAT TTTTATTTATTTTCTCTGTAAGAAGGGAAGTTTTTTTCCCCATGATGTTTCAATTGATATTATTTCGACACAATTTTTTA ATATAGAGCAAATAATTAGATTGTATATGTTAAGTCCTTTTTTTGCTCAGAAAGAAAAAATCTTGATTACAACTTCCACA ATTTCGTACATTAATAATTTACATGCTCCTGTTCCTTAACCATTAGTAGTTGTCAGGCAATAGCTCAGTCGTGGCTTATG GAGTTATGTTGCAGACTAGTGGTCATGACCTTCAAAGGGTTTGAGATTGCAGCAGCAAAACCTTAAAAATGTGGATGCAG TTAGTGATTCTTAAAATACATTGCTATGTTAAAATTTGTTTTTTGTACGAGGGAGGGGAGATTTTATGCATGCCTTTAAC ATTCTTGTGTCATGTTTGAGCTTACTGTGCCAAATCTGTTTTCATATCTTATTGCTTCTTGTATGATGAGATGGATACAT GCATCTCATATGGTGCTTCATGTCATGTGACCTGTATGGTATTCGCCATTTTATTTTAATCTTGAAACCTTATATATTTC TTTATGAACCATAAAAGTCCAGACTTTTTTCACAGACACAACATATAATGGATCTTCTTGTTATGTCTAGTCTCTTGCTA ACTAGTGCCATTAGGGTACTAGTTAGGATGGAACAAATGTAATAGCTTTCATGAAATGGTTGTACTATTTTTAATTTTTT AAACTAAATAACTAATCCATCGGTAATAGTTACTTCATTGACACAGTTATATTACAGACTACCAGAACATTTATCATTCC TTTAGTAGTTCCAAGGGTGTTTAACAAAATCTTAATTGTAGCTTGGAGCAGTAGGCTTGCATTTTCCTACTAGTTAAATA AACTGGTTCATAGGAGTACTTCTCTGCGTTATGTGGAGCATGAAGATCAACCTAGATCGACAGCCACTTATTATTTCACT TAGACAAAACTGGTATTCTAGTAGTTTGGAATATTTTCAGAATATCAGGCCTATATTGGGCCTTAAACTTAAAGTAGGTG TGAAGTTATTGAGAGTATTTGGAGATAAGAATGAATTTTCAGTTTTATGGAGGTTTGATATGTTTACATGGGACTGGAGT AGAGCTTTGGGATTTCTAGAGAAGTTTATGTGAATACATCTGTTATGGTTGAGGATATCTTTTTGGCTTCTCTTTTATGT TGTGTTCTGCCTACCAAGCAATGTTTAAGGCTGTTTCTTTAACTGATATTCAACACAGGGGCCGGCGGGACTCTGCTGCT TTTTTCTAGTTTTATTTCTTCTCTTTGATTTCCAATATTTTACTTATTTATGAATAACCATAGCATTATTTTAGGTGTGT TTGGGTTAACAGCTTAATTAAGCGCTTATGACAATGAACACTTATTCATAAGCTTATTTGAGAAGCCTATTGAAATAAGC TCAAAATAGCCTATAGGTATTTATTAGTGCTAACTCATAAGCTAGTCTGAGAAACTTGTCAAAATAAGCTCAAAAGAACT TATAGTTAGATCATAAGTTATTTTCCCATTGCAAAACAGCAAAACACACTCTGCTCACGCACTCCTTCAACACTGCAAAA TAGTAAACCACACGCTCTGCCCACACATTCCTTCAACACTGCAAAACAGTAAACCACACACTCTGCTCATAACTGCCACC ATGAATATATGACTCACCTAGAGCAAATAAAATTTAGTCAATAACTGCCATGCCATTTATGTAATTGTCCTGTAACATCT AGAAATAACTGATTATGTCTAACTAGATTCCGTCTGCCTTTTATTCCTCCCAACACTATTCCTTCCATCATACACCTTTA ATGGTTGTCCTACTGAAATTGTTAGATTTGTCTAATATGTATAGTTTGTAATATATTACAAAAAGTTATTGAATAGTTCA AGGGTCAAAATACTTGCTCTTGTAGTGAGGGGATCCCTTCCATAGACACTCGCAAACACATTTATCCATATGATTGAATT ATTGCTTTATATATGTTATTATATTACATAAAATTCTTGTTTGACTTGTTAACCCCCTATTCAGTATACAGATGAGGAGG TTGAAAGCTGTTTTGAAGAATTTTATGAGGATGTTCACACAGAATTCCTGAAGTTTGGAGAAATTGTGAACTTCAAGGTT CTTTTTTTAACTGCTATATTTTAATATTCATTTATATTTGTTTTAAATATTTCTCAATTAATATTGGATTATATTAAGCT ATTAACTCAGTTTTCATCATAATAGAACTTTACTTTTGTGGTACTGCACAAAACGTCACAAATGGAAATAAGTGATGGTT TATATCTATCGGAGTATAAGTTAGACCTAGGCCCTAGCCCAAATTCTAATATGGCATCAGAGCCAATTCTAGATCTATTA TTGGACCACCCCTTGAAATTTGAAATTAAAGAATGATCCTATCCGCCTTTTCGATATCCCATGATGTGGATAAGGGCATT AACTTGATTTGCCCGTAGATACTCCATGATGAGGATATGAGAATTACGATGAATATGAAGTTTGTGATCTCCATGCTCCG TATATTCAGTCCGACATTGGCTAGAGATATGACTAATGAAGTACTTATAAAGTGGGAGGGCAATCCTCATTTCTAAGCTA ACTATTGGGGTAGACTTAAGTCTACTATTTTTTGGGGTTGTTTTGCAACTACTTTTCTTGCTATTTTTTGTGATAATCTC AGCACTATCTCCCTCACAATCCAATGCTCCATTCCTGCACCAAGCACATGGAGTTGGACCTATTTTTTGTTCGTGAAAAG GTTCTTAGCAAGCAGATTTTTGCAGCATCTCCCTACATCTGTTCAACCTACTGACACACTCGCCAATCCACTTGCCTCTG CTCGTTTCATAGAGCTTCGTTCCAAGTTCATTGTTTGTGATTTCAACTCTGTTTCATCAGCCAGTTGAGCTTGTGGGGGG AGTATTGGAGTATAAGTGTTAGTGTATTAAAGTATTAATCAGTATACTGCATGTGTAAGCAGTTACAGCTGTTATAGGTA GTTAGCATTCTGTTAGAATTAGTTAGTATCCTACCAATCAGTTATGCCAGCTAAGCTGTTTGATTTGTCTATATATTATG TAACAGTAAATGATTCAAGTAACAATACACATTTCACATAAACACTCTTTCAATTCCCGCTCTCTCTCTCTCTCTCTCTG GATTCTCTGTTTTCTAAGTAGATCTTGCTGTACAGAGTGGGAAGTAAAAAAAATCAAATGGAGAACTTCGTCAAGCATTT TTGTAAGTAAACGACGGCAGAGGCTTAGGTGGTTTGGGTTTATACATAGAAGACCCGTAGAAGTACCTATAAGGAGGATT GACTAAATGGAAGAGTTTAATAGGTAGGGGTAGAACATGAGCTAGGGAAACTAGAGGCCAAAGCATAAGGTAAATAATTC TGTTAAACTCTCTAAGATATGTAACTGAATTTCATTATTGAAAAGCTAAAGATTACAATGAGTGATCTCAGTATTTATAG AGAATACAAGGCTTGCTAAGCAAGCTACCAACTCTAACAGAATCAGTTATGTGACAGCTGTAATGACAGCTCACATGACA GCTGTATTGACATCTCATTCTAACAGAATGTAACTAACTCAAATATTAACTATACTACTAACAGTAACTAACTTCTTAAT CAGAGTAATGTGTACTCTACTCTAATAGGCCCCCTCAAACTCAAGGTGGGTGAGAAATGGATTTCTCAATCACATTGAGT TTGGCACGAAGAGTTTCAAAACGAAGAGGTGAAAGAGCCTTTGTAAAGAGATCTGCCAGTTGATCAACTGAAGGAATGTG ATGCACAAAAAGAGACTTGTTGAGAACTTTTTCCCTCACAAAGAAGATGTCAAGCTCCATGTGTTTAGTGCGGGTGTGTA GAACTGGATTATGGGTCAAAGCCACTGCACCCATGTTGTCACAAAAGATTGTAGGAGGAGAAAAAGGAATCTGCAACTCC TGCAAAAGTGACTGAACCCATAGCAGCTCAGCAGAGGTATTGGCTAGGCTTCTGTATTCTGCTTCAGTACTGGAACGAGC CACTAAGGTCTGCTTCTTGGAGCTCCAAGACACAAGATTAGGGCCAAAGAAAACACATGATCCTGATGTTGACCTTCTGT CATCAGGATCTGATGCCCAATCAGCATCACAAAAGGCCACTAGAGAAACAGGAGAATGAAGAGAACAAGGCTTAAGATGC AGCCCATGATGAAGAGTACCCTTAAGATACCTTAATATTCTCTTAACAGCCTTCCAATGATCTTCCAACGGCTGACTTAG AAATTGACAAACTTTGTTCACAGCAAAGCTTATCTCAGGTCTGGTTAAGGTGGCATATTGAAGTGCTCCTACAATGGATC TGTAAAGGGTAGGATCAGCAAAGTAATCTGCTCCATATTTGCTCAATTTGGCACCACCAACCATAGGAGTAGAGATGCCC TTTGCTTCTCCCATATCTGCTCTTTCAAGGAGATCAGTAATGTACTTTGTCTGGGTCAACAATAATGACCTGTCCTGAAG ATGATGCACCTGAACACCAAGGAAATAATCTAGCAGTCCTAGCTGCTTCAAAGAGAACTCAGAATTGAGATTCTCAACCA CTTTCTGCACAAGAGGCAAAGAGTTGCCTGTAATGATGATATCATCTACATAGACTAGGATGTAAATGCAGCAAGTTGCA TTGTGGAAAGTGAAAAAAGATGGGTCACATCTACTAGGTTTGAAGCCATACTTCACAAGAGCTGACTTTAACCTTTCAAA CCAAGCTCTAGGGGCCTGTTTGAGGCCATAGAGAGCTTTGTTCAACTTGCAAACAAGAGTCTTATCCTCATTCTGAAATC CAGAAGGTTGTGTCATGTACACCTCCTCCTGAAGTGCACCATTGAGAAAGGCATTATTGACATCAAGCTGATGAATATGC CACTGTTTAGTGATTGCAAGAGAAAGAATGAGCCTAATAGTAACAGGTTTGACCACAGGGGAAAATGTCTCAGAATAATC AAAACCCTTCACTTGATGATAACCTTTGGCTACAAGCCTTGCTTTATATCTATTGATAGAACCATCTGCATTCTCCTTCA CTCTAAACACCCATTTGCATCCTATTGGTGTCCGATCTTTGGGTAGAGGAACCAATGTCCAGGTATCATTAGCTAGTAAT GCATTATACTCAGCCTTCATGGCTGCCAACCACTTAGGGTCTTTGAGTGCTTGCTTGGCTGTAGTAGGTTCTGCCTGAGT GAGGAGCAAGGTTGGATGCAGTCTGGGCATGATTATGCCAGATTTTGCTCTTGTCTGCATAGGATGAATATTGCCCACTG GAGGTGAAGGCCCAACAGGAGAAGAGGGTGCTGAAGCTGTGCCTGAGGCTGCAGGAGAAGCTTGGACTTGCTCTTGTGCA GAAACCTGAGCCAGAGAGACAGGTCCTGAAGACAAATCAGAGTCTGAATTGGAGGTTGTAGGCTGAGCAGCAACTGGAAC TGGAACAATAGGTATTGTTGAAAGAATGCCACTATCTGGGAGGTCAGAGTCAGTGGAGGTAAACATGGCAGGATAAGGAA ACTTTACTTCATCAAAAATCACATCTCGAGAGATAAAAATTCTGCCATCACTGTCCATGCATTTGTACCCTTGATGAGAG GAAGAATATCCAATAAACACACATTCCTTAGACCTCAAGGAGAGCTTGTTGTGAGTGTAAGGTCTTAAATGAGGGTAACA GGCACAGCCAAACACTTTGAGAATCTTATAATCAGGGAGAGTCATAAACAACTTAGAATAAGGACTCTCATTGCCCAAAA CCACAGTAGGAAGCCTATTAATTAGAAAAACAGCAGCCAAGAAAGCATGATCCCAGTATTGGGATGGCATGTTAGCATAA GCCAGCAAAGATAAACCAGTTTCTATGATATGTCTATGCTTCCTTTCAACACTACCATTTTGATGGTGTGTGTAGGGGCA AGTGAGCCTATGGACAATGCCAAGTTTGGTAAAATGAGGGGTAAGAGGTTTGAACTCAGTACCATTATCTGTTTGGACAG ATTTCAGTTTCAAGCTAAACTTTAATTCAACCATGGCTTGAAACTGAAGAAAAACAGAATAGGTTTCAGATTTTTGTCTT GGGGGAAAAATCCAAGTGAACCTAGAATAAGCATCCACACAAGTCAAAAAATAAGAATATCCACATGAAGAAACAGTAGA GGCAGGACCCCATAGATCAGCAAAGACAAGTTCTAGAGGTGCAGTATAAACAGTATGAGAGGAAGAAGAAGGTAATTTGT GAGACTTTGCCAAACAACAAGCTGAACATACTGAAAACTTTGCTTTATTAGGTACTGGTATCTTACAAACAGTTAAAGCA GAATGCAAAGCCTCATGATGAGGATGACCTAGCCTATTGTGCCACAAGGCATAAGAAGTAGTAGTTACATCAGAGGTAGG ACTAGGTACATTAGAAATAGGTAAAGAAGCAGTATTAACAGAGGAAACAGCAACTGGAATTGGAACTGAGGAAGCTTTAA CAGAACTGGCTGGAGGAAAAGTTGGAGTATGCATCCCCTCAAAGATGTATAGACCATCTGGACCAACAGTACCCTTGAGT AGAACTCTAGAAGTTTCCTGAGATTTCACAACACAATAGGATGAGTGAAACTCAAAATAGACATTATTATCCTTTGCAAA TTTACTAACACTGACTAGATTCTTTGTGATATTAGGAACTAAAAGAAGATCACTAAGAGTGAGTGTAGTATTTTTGTGAT AAGGAGAAGGAAAAGAAGCTGAACCAATAGAGTGGATTGGCAAACCTTGTCCATTCCCCATTAGAATGTGATCAGTACCA GTGAGAGAGACACTATCAGAAATCACAGATGCATCATTGGTAACATGATGTGTTGCTCCAGAGTCAGGAAACCAGGAGCT GAGATTTGCTGCAGCAGGAGAAGTAGTAGGACCAGTAAGCATAGCCTGTGGAGCTCTGGCTGGAGGATTTGCAGCCCTAG GATTGCCACCAGGAAATTGTGCAGGTGTAGGATGCCACTGTGCACCACCATAAGGGGAATGACCAAAGGACTGAGCAAAG TTGCTCATGTTCATGCCTGAATTCTGAGGATACTGGCCTAACATCATGCCAGGAAGATGTCCAAACTGAGAATTACCAAA CTGAGTAGGATTTCCAAATTGTGGAACACCATAGAAAGGTGAGAATCCAAAGTGTGGGAGCATTTGTGGATGCATAGGCA TAGGCATGCCATAACCAGAAGATTGCATACCAAACGAGCCACTGGATCCTGATGAACCACGATGATAGCAGATGCTAGCA TCATGTCCATACTTGTAACAGATCTGGCATTGAACACCACTGCGATTACCGTTTCTTCCACCACGAGAGTTACGACCACC AGATCTACCACCATAACCACCGCGAGAACGAGAATCATCATATCCACCACGATTATCATAAGATCGATCATCGTAAGAGT TGTTGACAGCACTAGAAGCATAGTTAGCTTCTGAGGATGCAGTCGACTGTGTAGAGACAGTCGACGATGGTGTCGGCGCT GGCGATGGCGGCGCTGGAGGCGTTGGCGGTGGCGCAGCCTGAGCGAGAAGCGCTGACGGAGGATTTGCACTCATCTGACG AGTGCGAGAACGCTCAAGGCGCGCTTCATGCGCGATAACCATGGATTCAACATGCGAGATCGAGCAGCGATCATCGCGAT TGTAGATTACAGTCAAGAGATGACTGTAATCCTCAGGAAGACCGTCGAAAATAGCCTCAAGGTGCTCGCGATAGGTAACT GGATCTCCGATGGAGACAAGCGCGTTCACAATGGACTTGATTCTCTTGAGAAACTCCGATGAAGTCTTCGAGCCCTTGGT TATCGATCGCAACTCGGAACGTAGTTGCGTGGATTGAGCAAGCGATTGTGCTTGGAAGAAGTCGAGCACTGCTTCCCAAA TCTGCCAAGACTGAGTGCAGTTGACCACGGTTGGAAGCACTGATGGAGAAAGAGACGAGAGAAGCCATGTAAACAGTGCA GAATCTTGTTGTTCCCAGATCTGATATGCAGGATTTTCCACTGCATTCACGCGATCATCCTCACTGAGCCAGCGAGGTGG AATCTCTGGATGAGCAAGAAAGCTCTGCAACCTGTGCGTGCGCACGATGCCTTCAACGTGCTGCTTCCATGAAAGGAAGT TAGAATCATCAAGCTTCAGGATAAGCTTGTGAACTAGAGAAGTAGAACTCAGTTGCGGTTGAGCAACCGCAAGCGGAACT GGAGTTGCAGCTGCAGTTGCAGGTGCAGAAGCGTCATCAGCCATGGCGATGATGAAGAAGAAGAGGAAAAAGCGAGAAAA ATCAGAGAGAAAGATCCCAAGGATCGTTCAGCGCTCTGATACCATGTTAAACTCTCTAAGATATGTAACTGAATTTCATT ATTGAAAAGCTAAAGATTACAATGAGTGATCTCAGTATTTATAGAGAATACAAGGCTTGCTAAGCAAGCTACCAACTCTA ACAGAATCAGTTATGTGACAGTTGTAATGACAGCTCACATGACAGCTGTATTGACAGCTCATTCTAACAGAATGTAACTA ACTCAAATATTAACTATACTACTAACAGTAACTAACTTCTTAATCAGAGTAATGTGTACTCTACTCTAATAAATTCTTCT GCAAACTTAATATATGACAGCAGTATGGCGTGGATTGATTCATGTAGCCGACCTAACCTAGTAAGAAAAAGGTTGATGGT TGACTGGTCAGTTGGTTCTGTTGTCTCTATTGAGCCAACATTTCTGAAAAAAAAATCTAGGAGTATTTAAAAGTGAGCCA AAAGGGGACACGTCTGAACAACAATATTTTGGAAACCAAAATGTACGGCACATGTGAAAATAAATACATGAGAGTTTTGA GTTCTTGTCCCTTTTTTATTTCCCTGCATGTCCCACCTGCACAATTACTTGCCTCTGTATTAATCCTAATATCTGTACAT CATTTTCAGGTGTGTAAAAATGGTTCATTTCACTTGCGAGGAAATGTCTATGTACAGTATAAATTATTGGATTCTGCTCT ACTTGCTTATAATTCGGTTAATGGTCGATACTTTGCTGGGAAACAGGTATTGCTTTCTTTTGTCTCTTTGTGCCTGCCTG ATAAACATCTTGAGTATTGTAGGTTATATTTGAAACTCTTGAATTTATATGCCTTGGGATATTCACGTGGGACTTCATCT CTACCGTGCTCTATAACTGATTAATGTCCTGGTTTGTATCAATGTTCTGTAACTCCTGTTATATCCAAGGCAAGGCGGAA GAAATATTTGATGCAAAACTGGTTAATGGTAGACCATATTTGGGTTAGTTTGAGATAGTGAAGAGTCAGCACTCAGCACT GTACTGAAAGGTTATGTGAAAATTAAATGTTAGACTAAGTTTCTTTGAAGGATGGCTGTTAGGTTGGCAGTTTGAAAGGT TTAGTGGGATTTCATGATCAACAGCAGAAGGCGTGAATTTCTTAACTTTGTCCATATGTTTATGTGATAGAGATAATATA GTTATCGCATAACTCATATGTTTCTTGCTTTATTATGTTATGAGTTTCTACTGCATTCTGTTATCTTTTGTGAGGTGTTA GAACTCAGTTAGTGAGCTGCTCTGAAATTCTTATCATTTAGTTAGAAGTGCACAAGCTGCTCTCAGAAGCTTAGGATACA GTCTATATAATCCTCCCTATGTAATGCCACTTTACACAATAGAATGCAGTTTCTCATTAAAGTTTTTCTATCTGGTATAG TTTTTCAACAATCTGTCTATGGTTTATGGCAGGTAAGTTGTGAATTTATTAATTTGACAAGATGGAAGGTTGCCATATGT GGCGAGTATATGAAATCAGGTTTCAAGGTATACAATTACATTCGTGCCTGTTATCTTTCATTTTGACGTCTGGATCTGAC CACATGACCTAAACTCTTGGTTGGTTTTAGCTGCTATTTTTTACATTGAATAAGATGCTAGAAAAAGTTTTCAATCGGTG AACCATGTTCATATATTGGTTCTGTGGTTTTCTTTTGCATCTTCACAGACTTGTTCCCATGGAACAGCATGCAACTTTAT CCACTGCTTCCGCAATCCTGGTGGAGACTATGAATGGGCTGATTCTGACAAACCACCCCCAAAATTTTGGGTGAGAAAAA TGGCTGCTTTATTTGGTTATTCTGATGACTATGAGATCTTAAGGGAGCAAGGGAATCTAAGTGTGCAGAGCTACAGGAAC ATGTCAAAAACAGATTCTGACAGGTGTGCTTTTACCTCGTTGTTTCTCATTCCATGATATGCAATCGGTTCATTTGGTTA CTGGAAACAGCCAGAACATGTGTAAATGATTGTAAATTAATAACAAGCCCTAGTGTTTACCACCCTGCTGCATTTTAGAG CAATTTTTGCAAGTTTCTTGCTTAAATACCTTCATTTTGACCAAAACCCATGAGACCCACTGCTCACTTTCTTCATTTTT CAGTTTTCTCATCCTCTGTTTTGAAGGTTTCTAGCTTAACTTTATCTGATTACTTCATTTAGTTCTTATGTCAGTGTTTG GGAGAGCTTAAGCAAACAGCTTATGGTCCTACCATAAGCTGTTTTGAGCTTATTTTCATTAGCTATTCATGATAGCTTAT GAAAAAGAGCTTATGCTTATATATAGCTTATTTTCAATTTATTTCAATAAAAAATTTAAAATAGCTTATGAATAAGTGCT TATGACCATAAGCGTGCTTAATTAAGCTGTGTTTCCAAACGGGTCTGATAGGCTTAAACTTGTATGTTTAGCTTAATATA TATGACTTCAGTTGTGAGTTTTCCTTTAATTTTGAATAATTTCTTTTTACTTTTTATAAATTATGTTTATAAATTATTTA ACCTATATCTAAAATTTCATTTAAGCTGCCATCCTGTCATGCGCTATCCCACTAACTTGCATTTTTTGGGCTACAGGAGT ACAGGACTGATAACCCTGATTTTGACAAGATGCTAACAGTTCTGACTTGGTTAAAATAAAATCAAAAGTCCAATATAGGA ATCATCTAAAAAATTTAATCAAATACATGAACAAATTTTGGAGACTACTATATAGCTTTATGCTTTTCCCTTGCTGCATT AAGGGAGATAACTAGAGTTTTGTGGCTAATAAAGTTTGTGAATGTAGAGAGATTTATAACCTGGAAATATAGAACTGTTT TTGTCGGATTGAAGTTCAAGTTACTCAGTATGTCTTGGTTTATGTCATCATATTTTCTTAATTACGTCAGTATTTCTGTA TATTTGCCTGTCTGATTTATACTTTTTCTTGTGGTATCATAATATTTCGCAGGCATCACTCAAGAAGATCACAATCTGGG GAGATGGATCAATTAAATAGTGGTTATTCTGATAGAAGAAAACACGAAGATGAAAGAAATCAAAGAACTCCCAATGAGGG AAAGAAACGCAGAGACAGAACTCCTGATACTGATTCTGATAAGGAATGGTTAGAAGAAGAGGAAGATAGAGTAAAGCACC ACAGATACACTAGGAAAAGCTCAATCAATAAGAATAATAAGAGAAGCCATGAAGAGGATTCTGATGTGGACTGGACTACT AAAACTAGGGGAAATAAAAAGCAGCATGACAGAGAAGGAAGAAACTCACAAAAGTCGAACTGGGACACTAGGAACTGGAA TTGTGAGACTGGATCAGATGGGGATAGAGATAGAAAAAGACACCATATTAACCAAGAAGATCAAGATATTATGTGAGTAT TTCTGTATTTGCATTTCTGTATACTTTTGCATGTCTAATTTATATTTTTCTAATAGTATCATGATGTTTTGCAGGCATCA CTCAAGAAGATCAAGATCTATAAAGATGGACCAGTTAAATAGTGGTTGTTCTCATAGAAGAAAACAGGAACGTGAAAGGA AGGAGAGGACTCCTGATGAGGAAAGGAGTACCAACATTAAGGACAATCTTAAAAAGAAGTGCAGAGGCAGAACTCCTGAT ACTGATTCTGATAAGGAATGGTCAGATGAAGAGCAGACTAGGAAAAACTCGCATAATAGGAACCATAGCAGTAACCACGA AGAGGATTCTGATGTGGATTGCGGTACTATAACTAGGGACAATGAAAAGCAGCCTTACAGCAAAGGAAGAAACTCACATT GTGGGAACTGGATTTATGAGACTGGATCAGACAGAGGTAGAGATAGGAAAAAACATCATATTGACCGAAGGTCAAGCTCA AGATATCAGAGCAGGGATAGCAGTCATGTAACCGCTGAATCTGAATCTGAATCTGACAACGATAGAGGAGAGATGGAATC ACAACATGATTACTCTAGGAAAAGCTTGAGACACATGAGATATGACCTTCAGAATTACTGTGAAGACTATGAGAATGAAA ATGACAAAATTGATGGAGGTTGGTCTCAGAGGGAGAGTGAACGAGCAGCACATCATCACAAAAAGAAGAGAGCTTGTTAA AATCATTTTCAAGTTATTTATAAGATAGGGATGAGTTTCTAAGTCAGATCACTGAGAATATGCATCATTAGCTACTAATT AGAGATTATCAGTTATAGTTGTTAGTTTTCCATAGTTTTAAGTTGTGACCTGTTTCAATCAAAATAATGTAGGAAGTATT GGAAATCATCTGTATTTCAAAAGTTAATGGTTGGCAATTTTTAAATTAGTGACAATCTATCTATTATAATTATAATATAT ATTAATTCTGATGTGCGTATTGTAACGTTTACAACACAACTCTTCTTTCTTACCCCTTGCCACATTAGATTTTTAAATGT GACAACTCACCTCCAATGCTCTTCAAATGATGTGATTCCTAACCCATTGAATTCAGTTATCTCAAATTGATCCTTTGATC CCTCACATTCTAACCTGTCATAATATATTTTTTTTCTAACAGAACTTTTATTGAAACTCATAAAGGTGAAAAGTCTTCAC ACAAGGCAATTACAAATCATCACATAAAACCCAAACATCCTCCCTGTCACACCCCTCATTTGCCAAAAAATCAGCAATCA CAATACCCTCCCTCATAACATGTTTGACCCCACACAATTGACAAGAG
CDS sequence (LotjaGi5g1v0035100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAAATATGGAAGTGAGTGGAAGTGGAGGTCGAAAGGAGAAGAGGAAGGAAATGAAGAGATTGAAGCGGAAGCA GAAAAGGAAGGAGATGGCGGAGAAGGAGCGGATGGAGGAAGAGGCACGCCTTAACGATCCTGAGGAGCTGATGAGGCTGC AGTTGATAGAGCAGCAAGAAGCCGAGAGGATGGAAAAGGACAGGATTGCCTTTGACCAGAGAGAGAAGGCTTTCATTGAG ACCATCAATCTCAACAAACAGCTTCAACTTCAACTTCAACAACAATCCCCCAAATCCAACCACAACACTGGTGTTGATGT TGATGTTGATGATGAGTACGTGGAGATGGAGGAAGAGGGGCCACCAGAGATTATTTGGCAAGGGAATGAGATCATATTCA AGAAGAAAAAGGTCAGAGTTAGGGTTTCGGACAAGGAAGCCAATCCAATTCATAGCCAGGAGCAGGGTGTCGTCGGTGAT GATAGACCTACATCAAATCCCTTTCCCCCGGAATCTCAATCTCACACCAATTCAGCGGCGCTGCTCGACAATGTTGCTCG ACAAGTACCGAATTTCGGAACAGAACAGGATAAAGACCATTGTCCTTTTCATCTAAAAACTGGAGCATGTCGTTTCGGTC AACGTTGTAGCAGAGTCCATTTTTACCCTGACAAGTCCTGCACCATCCTGATCAAAAACATGTATAATGGTCCTGGCCTC GCATGGGAGCAGGATGAGGGCCTTGAGGTCTGTTCATTTTGTCAGGCAATAGCTCAGTCGTGGCTTATGGAGTTATGTTG CAGACTAGTGGTCATGACCTTCAAAGGGTTTGAGATTGCAGCAGCAAAACCTTAA
Protein sequence (LotjaGi5g1v0035100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEENMEVSGSGGRKEKRKEMKRLKRKQKRKEMAEKERMEEEARLNDPEELMRLQLIEQQEAERMEKDRIAFDQREKAFIE TINLNKQLQLQLQQQSPKSNHNTGVDVDVDDEYVEMEEEGPPEIIWQGNEIIFKKKKVRVRVSDKEANPIHSQEQGVVGD DRPTSNPFPPESQSHTNSAALLDNVARQVPNFGTEQDKDHCPFHLKTGACRFGQRCSRVHFYPDKSCTILIKNMYNGPGL AWEQDEGLEVCSFCQAIAQSWLMELCCRLVVMTFKGFEIAAAKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 45 | 45 | - | – | |
| MobiDBLite | 1 | 16 | 16 | - | – | |
| Coils | 13 | 45 | 33 | - | – | |
| PANTHER | 13 | 250 | 238 | 2.7E-80 | – | |
| PANTHER | 13 | 250 | 238 | 2.7E-80 | ||
| MobiDBLite | 29 | 45 | 17 | - | – | |
| MobiDBLite | 144 | 177 | 34 | - | – | |
| ProSiteProfiles | 195 | 223 | 29 | 11.911 | ||
| Pfam | 201 | 220 | 20 | 7.1E-5 | ||
| PRINTS | 201 | 220 | 20 | 6.2E-13 | ||
| PRINTS | 220 | 240 | 21 | 6.2E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Cellular component | U2AF | A heterodimeric protein complex consisting of conserved large and small U2AF subunits that contributes to spliceosomal RNA splicing by binding to consensus sequences at the 3' splice site. U2AF is required to stabilize the association of the U2 snRNP with the branch point. |
Expression pattern of LotjaGi5g1v0035100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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