Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0057200 |
| Transcript ID | LotjaGi5g1v0057200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G06740.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9FG33|LRKS5_ARATH Probable L-type lectin-domain containing receptor kinase S.5; TrEMBL-Plants: tr|G7K2N4|G7K2N4_MEDTR Lectin receptor kinase; Found in the gene: LotjaGi5g1v0057200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9678423..9682751) extracted from Lotus japonicus Gifu genome v1.2.
AAATTTTTAAATCACATTTTCAGTTCCTCTTAATGAAATTCTTAATTCCTAATTCTTTATCTTCATCTTATTTCTCTTCC CCCTTCATCTTCATCCATAGCTCAAACCCAATCTCAGGGACAGGAACTGTATGCGCGTTGTGTGCGAGCAATCAGTTGCT TTGTAGCATGGAAGGTGTGGGTGAGGAATTGGTGGAACCAGTAAAGCAGGGAGGGTCGTGGCTTTGATTTGGATCGCAAC AGTGGGGGTAATATATGGAGCTTGAGAAATGACATTGCATTAATTCAGGGGAAGTGGAGTGGATATTGACAGAGCTGTTG ATATGATTCAATATAGACTGTGGCTGTGGTGGTTAAACTTAAAGGCAAAGGAGAAATCCCTTGTGTCATCCATATTCGAA TGGATTGAGAACCCAAAGGCATGCTTAAATTCTCTCTAAGATAACTGGTCATACCACTGTATCTGTCCACTTGCTTTTTA GCTCAACTTAAAGGTCTGTTAGTATGCATGAATTTGAAGGCCTGCAGATATAACCTTTGTGGGAAAGGGCATTATCCCAC CAGCTTAGAGGAATTGGCTATGGAAGGGATTGGAAAGGAGCCTACTACGGATTAGTCTCTGTTTCCCACTTCTTTCCAAA TCAACCATTGTTTAAGATAGAACATTAAAAAGAATTTCACATTGACCATAAAACAGAGTCAAAAGTGGCAAGGTTCCCAT GTTAGTTGGAATTTGTCAAATTGGGTCCATCCAGGCGTGGGTATAGTAGCTTATGGATCTCTCTGTGATAGAATTTTCTG AACAAAATCAAACTCACTCACACTTGGAAATTAAACACCTTAGTCAATTTACAGCATCTAACTAAACACTTGACTTCCCT TACAGGAACAAAAAACTGAAACAAACACTCCACTTTCATTCATGATTCAATTTCAAATCATGCTCGAGATGCTTCTTCAT CTACTACTTCTTCCACTCGAGTTCATCCTCCGTCGCCGCCGCAACAGGGCTAACGTAGCTTACCTCTCCGCCGTCACCGG TATCCTGCTGCTGGGAAGATGATGGAAGACTCGCTTCCTTCAACACCTCCTTCCTCATCAACATCTTTCGAGTCTCCAAT GCTACCCCCGGTGAAGGCCTCGCCTTCCTCATCGCTCCTTCCCTCACCATCCCTCGCAACAGCTACGGCCTCACCAACGC CTCCACCGACGGCAACTCCACCAACCGCTTCGTCGCCGTCAAGCTCAGCACCGTCAACCACGAGGTCGGCGTCGACGACA ACTACATCGGACTCGACGTAAACGGCATCAAGTCCTCCAAAAACATCGTTTCCCTCACCCGGTTCAGCATTCGGATCGCT CCCGTTGGGGCCCAGTTCTACGTGCTGTGGGTGGAGTACGACGCAGATCGGAGGTTAATTAGCGTCTACATGGCGGATCA ACCTTCTCCGGAAGCTCCGGTGGTGGAGAAGCCGGCCGAGCCCTTGTTGACTTGGCCTCTTAATCTCAAATCGGTAGTGA ATCAAATGTCGTATTTTGGGTTCTCCGCTTCAACAGGTGTTGTTGCTGTTTTTTTTATAACCAAATGTTACGTTAGTTGT TAGTAAATTAGTACAAATTTTCCCTTCTCGGGATTCGAACCCTGACCTTTTACATGCAAATGTTGTCGTATTTTGGGTTC TCTGCTTCAACAGGTATTGCTGTTGAGCTGAACTGTGTCCTTAAATGGAACATATCCATTGAGGTTTTCCCCGACAAGAC TAATATTTTGAAACATGGTGAAAATTCGAACTCACTGAGGATAGGTTTGGGTGTTGGGGTGCCTCTTGGGATTCTCGTTG TGGCGAGTGTTGGTGGATTTTTGGGCTACATTTTCTGGAACAAGAGGGAAAATGCCTCTGATCCTCTGCTTGTTGGGACC CTCAAGAACCTACCCGGAACCCCGAGAGAGTTTCGGTACAAGGATCTCAAGAAGGCAACCAATAACTTCGACGAGAAAAA CAAGCTTGGGCAAGGAGGGTTTGGTGTTGTTTACAAGGGAACACTGCCGGATGAAGGGTTGGAAGTGGCGGTTAAGAAAT TCTCCAGGGACAAGATGAAGAGCACGGATGATTTCTTGGCTGAACTCACCATTATCAATCGTCTTCGTCACAAGCATCTT GTCAGGTTACAAGGTGAGTTCAAGTTATTTAGCAGCTTGCATATTTGGCTCATATGCTTAATATCAATTCAATCATGCTG GTCTATGTTAGTTTCAGTTTTAGTTTCATTAATGCTTGTTACGTCTTTCCTTTCATGAACCCTTGTTAAATTCAAGTTCG AATTTTAGATGTGACAATTTGTTGTTAATGTTCCTTCCGGATCATATAATCATCCAGGATTATTTGAAAATTGAATGCAA TGACTAACTCGCTGCCAATGTTGACCAGTCACCCCATCTTGTGCATTCAATTATTGATCTTAATTATAGTTTCCCAAAGC CAAAGAGGACTATTTTAAACGCATTTTGGCCCTTATAGAAGAAAATGACCTCGTTTTCTTCTGGATTTGGTTTTCAAAAT GAACTTTATCCTCAGTAGTCAACATTAAGTACTGCTGTTTCTACTTTTAACCCAACTCTGATTTTCAAACATTATAGGGT ACCTCCACACCCATCTCTAACTTCAATTTTTTATCATTTGTCTTCTTTATGGCTGAAAATTTTGTAACATTTGAAGCATT TTTTAATCTAATTTCCAGCAAAAACTTACTATGCACATTGTCAGCTCAAGTTTATTATCTTCTAATTGAGGTCGCAGTCC CAAACAACTTGTTGGAAGGCCAGTGCTTCCCTGAATCTTTTTATTGTAAACATAAAAGCCTGAAGACATTATCTCCAGGA TCCTAATAACATAAATGCATGTATACCCCATTTACTTTGCCTTGATTTACAAGCATTGCCAACTAGTGTAGTAGAAAAGT TAATAAGTTATATATGAACCTGGCATGACTTGATTAGTAAAAGCAACAAATAATGAAATAAAAGCTAACATATATGCCCA ATGACAGCAGTTTATCTGCCAATGCCATCATATTAATTGTATATTTAGGGAGGAACTGACTTTAACACTAATAGTACTTT GATAATAATATACAGGATGGGGCCACAAAAACGGCGTATTGCTCTTGGTGTACGATTACATGCCCAATGGCAGCTTAGAC AACCACATTTTTTGTACGGAAGGGAGCAGCATTAGCCCCCTAAGTTGGCATCTTCGGTACAGGATCATATCAGGGGTGGC ATCTGCACTGAATTACCTGCATAACGATTATGACCAAAAAGTGATTCACAGAGACCTTAAGGCAAGCAACATCATGCTGG ACACTGACTTCAATGCTCGGTTAGGTGACTTTGGCTTGGCTCGCGCAATTGAAAATGAGAAAACATCATATGCAGATCAG ATGGAAGGAGTTCAGGGCACTCTGGGATACATTGCACCTGAGTGTTTCCACACAGGCAAGGCCACTAGGGCATCAGATGT TTATGGGTTTGGAGCTGTGCTCCTTGAGGTGGTGTGTGGTCAGAGGCCATGGACAAAGATTGAGGGTTACCAGTTTTTGG TGGACTGGGTGTGGCACTTGCACCGCGAAGGAAGGATATTAGAAGCAGTGGATCATAGACTCGGGGATGAGTATGTGAGT GAAGAGGCAGAGAGGGTATTGAAATTAGGACTAGCATGCTCACACCCCATTGCCAATGAGAGACCTAAAATCCAGGCAAT TGTTCAGATCATATCTGGCTCAATGCCTGTGCCTCATGTACCACCATTCAAGCCAGCTTTTGTGTGGCCAGGTTGGGATC TAGAGAGTCTTCCAGATATCCTTACAGAAACAATGAGTAGTACTGAATGAATACATGGTGGCTTTTAAGTTCTCACACGC ACTAGCATCTGATTAGCTGGTAACAATACCAACCCTTACATTTACATTATGGATTGAGTGAATGTTTATATTGGTTATTG GTGTCTCCAGATTTCTTAAGACTAGACCAAGCAGTAAGGGCACCCAACCTAGCCGCCATAACCTGTATGAGTGAAGATCG TCTGACCTTTGTTTTGGTAACATTGAACAGTGAAGATCAGCTATATCCCTTTGGTTGCCCATCACTAGTCCAATCCCTTT TCATGTTACCGCATTGTAACTCACAATCCTGTAATACAATGCCTTGGCATATAAGTTCCCAACATTTATAAGCTAGGATA CTCATATTATTTTTCACAGGTTACATTGACTCATTTTGAGGTTTTTTCTTTACGTTATTTTGAGTTTTAATTTAATGGAT AAACATAAA
CDS sequence (LotjaGi5g1v0057200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATCAACCTTCTCCGGAAGCTCCGGTGGTGGAGAAGCCGGCCGAGCCCTTGTTGACTTGGCCTCTTAATCTCAA ATCGGTAGTGAATCAAATGTCGTATTTTGGGTTCTCCGCTTCAACAGGTATTGCTGTTGAGCTGAACTGTGTCCTTAAAT GGAACATATCCATTGAGGTTTTCCCCGACAAGACTAATATTTTGAAACATGGTGAAAATTCGAACTCACTGAGGATAGGT TTGGGTGTTGGGGTGCCTCTTGGGATTCTCGTTGTGGCGAGTGTTGGTGGATTTTTGGGCTACATTTTCTGGAACAAGAG GGAAAATGCCTCTGATCCTCTGCTTGTTGGGACCCTCAAGAACCTACCCGGAACCCCGAGAGAGTTTCGGTACAAGGATC TCAAGAAGGCAACCAATAACTTCGACGAGAAAAACAAGCTTGGGCAAGGAGGGTTTGGTGTTGTTTACAAGGGAACACTG CCGGATGAAGGGTTGGAAGTGGCGGTTAAGAAATTCTCCAGGGACAAGATGAAGAGCACGGATGATTTCTTGGCTGAACT CACCATTATCAATCGTCTTCGTCACAAGCATCTTGTCAGGTTACAAGGATGGGGCCACAAAAACGGCGTATTGCTCTTGG TGTACGATTACATGCCCAATGGCAGCTTAGACAACCACATTTTTTGTACGGAAGGGAGCAGCATTAGCCCCCTAAGTTGG CATCTTCGGTACAGGATCATATCAGGGGTGGCATCTGCACTGAATTACCTGCATAACGATTATGACCAAAAAGTGATTCA CAGAGACCTTAAGGCAAGCAACATCATGCTGGACACTGACTTCAATGCTCGGTTAGGTGACTTTGGCTTGGCTCGCGCAA TTGAAAATGAGAAAACATCATATGCAGATCAGATGGAAGGAGTTCAGGGCACTCTGGGATACATTGCACCTGAGTGTTTC CACACAGGCAAGGCCACTAGGGCATCAGATGTTTATGGGTTTGGAGCTGTGCTCCTTGAGGTGGTGTGTGGTCAGAGGCC ATGGACAAAGATTGAGGGTTACCAGTTTTTGGTGGACTGGGTGTGGCACTTGCACCGCGAAGGAAGGATATTAGAAGCAG TGGATCATAGACTCGGGGATGAGTATGTGAGTGAAGAGGCAGAGAGGGTATTGAAATTAGGACTAGCATGCTCACACCCC ATTGCCAATGAGAGACCTAAAATCCAGGCAATTGTTCAGATCATATCTGGCTCAATGCCTGTGCCTCATGTACCACCATT CAAGCCAGCTTTTGTGTGGCCAGGTTGGGATCTAGAGAGTCTTCCAGATATCCTTACAGAAACAATGAGTAGTACTGAAT GA
Protein sequence (LotjaGi5g1v0057200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADQPSPEAPVVEKPAEPLLTWPLNLKSVVNQMSYFGFSASTGIAVELNCVLKWNISIEVFPDKTNILKHGENSNSLRIG LGVGVPLGILVVASVGGFLGYIFWNKRENASDPLLVGTLKNLPGTPREFRYKDLKKATNNFDEKNKLGQGGFGVVYKGTL PDEGLEVAVKKFSRDKMKSTDDFLAELTIINRLRHKHLVRLQGWGHKNGVLLLVYDYMPNGSLDNHIFCTEGSSISPLSW HLRYRIISGVASALNYLHNDYDQKVIHRDLKASNIMLDTDFNARLGDFGLARAIENEKTSYADQMEGVQGTLGYIAPECF HTGKATRASDVYGFGAVLLEVVCGQRPWTKIEGYQFLVDWVWHLHREGRILEAVDHRLGDEYVSEEAERVLKLGLACSHP IANERPKIQAIVQIISGSMPVPHVPPFKPAFVWPGWDLESLPDILTETMSSTE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 78 | 78 | - | – | |
| Gene3D | 7 | 68 | 62 | 3.9E-10 | – | |
| PANTHER | 11 | 439 | 429 | 7.8E-213 | – | |
| PANTHER | 11 | 439 | 429 | 7.8E-213 | – | |
| SUPERFAMILY | 13 | 162 | 150 | 1.22E-16 | ||
| Pfam | 13 | 65 | 53 | 1.1E-9 | ||
| TMHMM | 36 | 58 | 23 | - | – | |
| TMHMM | 79 | 101 | 23 | - | – | |
| Phobius | 79 | 104 | 26 | - | – | |
| Phobius | 105 | 453 | 349 | - | – | |
| Gene3D | 118 | 217 | 100 | 4.8E-31 | – | |
| SUPERFAMILY | 123 | 434 | 312 | 4.72E-80 | ||
| ProSiteProfiles | 141 | 424 | 284 | 38.11 | ||
| SMART | 141 | 402 | 262 | 4.5E-36 | ||
| Pfam | 142 | 413 | 272 | 5.8E-50 | ||
| CDD | 147 | 415 | 269 | 1.59956E-91 | – | |
| ProSitePatterns | 147 | 171 | 25 | - | ||
| Gene3D | 218 | 420 | 203 | 1.1E-61 | – | |
| ProSitePatterns | 265 | 277 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi5g1v0057200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…