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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0162600 |
| Transcript ID | LotjaGi5g1v0162600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor bHLH140; TAIR: AT5G01310.1 APRATAXIN-like protein; Swiss-Prot: sp|Q9M041|BH140_ARATH Transcription factor bHLH140; TrEMBL-Plants: tr|K7K399|K7K399_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0162600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:41773907..41780331) extracted from Lotus japonicus Gifu genome v1.2.
CACTGCATAAAACTAAACTATAAATGAATTCAGGCACAAAAAGGACATGTGTTAACAAAATTGATCATGTTATTCTAACA CTGCATAAAACTAAACTATAAATGAATTCAGGCACAAAAAGGACATGTGTTAACAAAATTGATCATGTTATTCTAACACT GCCTGCATAACATGTTCTGATAGTAGCTCCCTTTGGCAATTTAACACTAATAGGCTTGATTTCAGATAGTGCATCAAAAT TATTCTTATCAAAACAAACATGATCACTTGCCCATGAGTCTATAATCCATCTCTACTATCATAATGCTAAAAGCAAGATA AGGCAATGTGTTTACCATGTCCTTGTAGTTTCTCCTTCATAGGAAGTGGATTTTATCACATGATTCACAAAAGCATTGTT ACTATCTGGTGCTTTCTTTGGAGTTGTAGTAGCTTGCTGTATCATAGCAATAATCCTCTTGTACTGGTCAGCAAAGAAAG GCTCCTCAGTAGCTCTCTATGAATAAGCATCATCCTCTTGATCATGAGAAGAATCATAACTTCTACCAGTATTGTTAACA TGACTAGAACTTTGTGCACCATATATGGAGTTAAAAGTAGTTGGATAACCATGTAACCTGTAACATATTTCAATAGTATG CCCTGATTTCTTGCATTGAGTACAACATTTTACAGTATTCTTGTAATTGGAACTAGCAGGTGTTCCTCTGCCATATGGCT TCTTCCCTTCTACTGCATTCACTATAGCTAATGAATCTCCTGTTTCCTCAGTAACAGTTTGTCTCTCATGTTGTATTGCT AAGGATACAACCTTAGCGCAATTGATGGAAGAGGATAACTCATCAAAATTTGTGACTTCACCACTCCAAAACTATCATTC AACCCTAAGAGAAATCTGATTGTGTTATCTTGCTCTCTGAACAATTTCACATTCTCAATTCCATCACATCTACACGGAGC AACACATCTACATTGTGGTATTGGTCAATAATTCTCCAATTCTTCCCGAAGTATTTTCAATTCTGGGTAGTATTCATTCA CAGACAATGTTTAATTTTGATTCAGATTGCTAATTTCATTATGCAATTATGAAATTCTCACTAAATCCCCTTGAGAAAAC CGATCTCTCAAATCTCTCCATGCATCACAATCATTTTCAACAAACACTATACTATTTGCAATTGAAGTTGTTACAGAATT GAGGATCCAAGAATGTATCAAACTGTTGCATCGATCCCATGCCTCAAAGTTTGCATCGGTTGCTGTCGGCACTGGAATTT CGCCATTGACGAATCGAAACTTATTCTTCGCCACGAGCGCACGCTTCATCAACCTCGCCCAAGCGTTGTAATTCTTGCCA TTCAACGGTGGATTCACCATGGTAGCTGAAGGATTATCACTCAAATGAATGAAATATGGAGATCCTGGGTTCTGTGAAGG ACCAAGAACCACATGAGGAACTGCATTGTTGTTGTGATTGTTGCGAGCCACCATTGTTGCAGAAGCTTTGTGATGGCAGA ACTCTTTGCTAAGACTCTGATACCATCAAAGAAATCAGAGAAAAGCTTAAAGAAGCTTGAAGAAGAAGATGAAAATTTTA TGTATATTGAACTGAATGATTCAGATTACATTGGAATAAAAGGTAAAGCTATTTATAACAAGACTTAACATAACAAACTT GTAACTAACTCTCTAATTTTGTTTTAACTATCTAACCACTTGCCAGCTCAGCTATTAAGCACTAACTGCTAACATTTACA AACAAGTCCCTATGCTTCGTTTCTACTCAGAACTGGTCCTTGAACAGAACTCTTATATTTTTACAGTCCGCAACCCAGAA ATCGACACAACACAACCGTGTGACAGGATCTTGAAGGGCAAGGTCGAAAGGTGATGATGGAGATGGAGATGGAGATGGAC GAAACTTCTGAACCCAAAGGTTTCCTTCTAGAATCTTCATTGATTACTTGAAATTGAAATGAATCATGGAAACTGGAACC CTAACTGCGTGTGTGAATGTGAATGTTAAACGCAGAGGAAAAGCCCGTTTTGGTGATCTTAGTGGGAGCACCGGGAAGCG GGAAATCCACCTTCTGTGAACAAGTTATGCGTTCCTCTTCTCGCCCTTGGGTTCGCGTTTGCCAGGTTTACCTACTTCCC CTCTACCTGTTTGATGAAATGTCTCACTCATGGGTTTCACTTTCACCACTCATGCTTTTGTTTCACATATTGTGGTAACT GTAACTGATACCTATAAGTCAGGCACCTGGAATAATCCCTTGGAAAATCAGTTGGCAAATCTCTCAATATTGAGGCTGAT TCTTCCTGAGCTTTCCTTCTTGCATCAGTTATAACTTACAAATAATCTTCACTCTTGAGAACTATTATTTGTCTAAAGGA TATTCTGTTTGGTCTTTAATGTCAGAGAAAGAAATTGGAAATACTATTGTTTATTGCTTAAGAAGCCTTCCTTCATGATT AAGGTTTTGGCTGTACCTTCACCCTACCTCCTAAAGGGAACATCAGTGGAGGAGGCTCGGACCATTGTGGGCTCTGGGAG GGTTTGATAGGTACAGCCTTAGTCTCGTGAGCCGAGAGACTGTTACTGTAACTAAGATTTAGGACTATCAAATCACAAGG AAGTGACTGTGCTGCTGTGCCAAAGCTCACCCTTGTATCAATTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTTC CTGAAAATGGTTTTGATTCTTTATCTTATATAACATTTGTTATATATTTTTTAATTTTGCTTTAGGACACTATTGGAAAT GGTAAAGCAGGAAATAAAGCCCAGTGCCTAACCAGTGCAACTAGAGCATTGAAGGATGGAAAGAGTGTATTTATTGACCG GTGCAATCTTGACAGAGATCAGCGCTTAGATTTCATGAAGCTTGCTGATGGACCCCAAATAGATGTCCATGCAGTTGTAC TTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCTGTAAAACGAACTGGGCATGAAGGAAATCTGCAGGGTGGAAAAGCT GCTGCAGTTGTGAATAGAATGCTTCAAAAGAAAGAGATGCCAAAATTAAGTGAAGGTTTTAACCGAATAACATTTTGTCA GAGTGACAGTGATGTCAAAGATGCCATTAATACTTACAGCACGCTAAAGCCACTGGATAATCTTCCACATGGCTGCTTTG GCCAAAAGAATCCAGATTCCAAAATTCAAGTCGGTATAATGAAGTTCCTTAAAAGAGCAGAGGTCCCAGTTAATGCTGCA TCTGGAGAAAAGGGCACTGAAGAATCCACTTCTGAGACACCGGGAAAAAATGATACCTGCTGCAAAGATATGGAAAAGAT TCCCTCAATTCCACCTGATGCCAACTTAGAGTCAAAGGAAATAGAAGATCAAGCTGTTGGCTCTGCTGGCTCCCATGCCA ATCGAGTTTCTCTGGATGATACTCCCACTCTGGCATTTCCATCTATTTCAACAGCTGATTTCCAATTCAACTATGAGAAA GCAGCTGATATTATTGTTGAGAAGGTTGCAGAGTTCTCAAATAAGCCGTGGAATGCCAGACTTGTTCTAGTTGACTTGAC TCATAAGTCAAAGATTCTGTCCTTAGTTAAAGCTAAAGCAGCAGAGAAATGCATTGACACCCAAAAGTTCTCTACCCATG TTGGAGACATTACTCGTCTTCATTCCACAGGAGGTTTGCGCTGTAATGTAATAGCTAATGCTGCCAACTGGTACGATTCT ATGATTTCAGTGTATACCAAAATATGTATCTATTTAAAACTAATTAATCCATAAAACTGAAGTTGAAATTTAGTAAACAC AATAATAAAGCACTCACCCAGGTGAATATGTGTGTGTGTTAATTATGACTTTAGATGGTAAGGGGTAAGCTGTGCTGCAA CTGTTAGGATTTCTCAGTCTCTGGTTATCTAATTGTTCTGTTAACTGTAATTCTACGATCAAATTCTAGATAAAGCTTAT CTATTACTTAAGAATCTACTGAATTTTTTTTTTGTCTTTCTTCATTCAACTTCAGCTGCTAATTGATCAATTCAACTGCC TATAATTTCGGTCATCCATTCGTAATTATTTCAGTTGACACACCAACATTGCTTCCAGATTGGTGTGGATTCAATTAATT CTTACTTATTTCTAGGGCCCTCTTTTTCTGTTAAAAGCATTCAATAAACTCTGATAATACTTTCAGCCAGATAACCTGTT TCACATGTTCTCATGGTTAAATAAAGAATTCTTTTGCAGGCGGTTAAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTT TTAACGCTGCAGGTCCTGAGCTAGAGTCTGCAACTAAAGAAAAAGTAAAATCTCTTTCACCTGGGAATGCTGTTGTTGTC CCTCTACCACCATCTTCTCCCTTGTTCACTAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCC ACAACGACCAAATTATCTGGATAATGATTATAATAAAGGCTCTAAAATTCTCCAAGATGCTTATGCTTCACTATTTGAAG GTTTTGCATCTATTGTGAGGAACCAAGCAGAGCAACCTAGTGGAAGAAATGAAAACCTTGAAAGAAAGTTCTTGGAGTTG AAGGATCAATCAGAACACTGCTCTAGAAATCATTTCACAAACACTGTTCAAAAGAGTAAGAGAGATTCTTATCATGGGTC GGAAAAAAGCAAGAAATACAAGGAAACTCAGGATGGTTTTGGAGTGGCCTTTACTGATTCTAATGTTGAAAAGGCAGATT CAGAGCATAGAAGAACTGATGTGAGCAAGAGTAAAGCCTGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGAAT CCTGAAAAGCATAAGGATGATTTGCTTGAAATATCAGAAGATGTTGTTGTGTTGAATGATCTGTATCCTAAGGTTCAATT TGTCCTGTTTGTTTCTCTTTCATAATTTTCTGTCATGCTTGACTCTGTCAATATATAACACTAAATTATTTGTGGTTGGC AGGCAAAGAAGCATGTTCTGGTATTAGCACGAACTGGAGGTCTTGATTGCCTGGCAGATGTCCAAGGTGCTCACCTTCAG TTATTGAAGACAATGCATGCTGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGCACGAGAGTGCATCACTGGTCTTTCGCCT TGGATATCATTCGGTATGCAGAAATTAAGAACTAGTTTCCTCTTCCTCCACCCATAAAAGGAAAAAGAAAATAAAGATCC TCAGGCTTTTGTACTTTGGCACCATGTTTTCAATCTATAAAGTAAAAACGTATTCGACTTGCATGGTGTCTGATTGGGTT CATATTAAAAATTGAGAGTTCAAAAATGACTTCTTTTGTGGTTTAGCATGGTTTTTGGTCAATAACTGAAGACAATTGAA GTGATAATTTTCCAAGAAATATTGGAAAAGGAATATATTGAAAAATGTGGGTGAACTATTAAAAAATTTACTCTATCACG TTAGGGCTGGGTTGAGAAGGTGCTTATACAAATAAATGCAGTCCCATGGTATGTATTATTTGTTTTGTTGGGCATGTTTT TAGATATATCATTTATAAACTGAAAGTTTCAGCAGTTTCTAAAATCCTTCTCTTTTTCTCTTGATTCCCATCACATATGT TGAACCTTTTGGACATGTCTACCTTCTGCAGGCTCCATCAATGCGGCAACTACACTTGCATGTTATCAGCCAGGACTTCG AATCAAAACATTTGAAGAACAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGTGACTCGGTAGATGTAATTGAT GAGGTTGAGGTCTCTAATCATGGAAAAGCAGCACTGAAAGATGATGATAAGCTCATGTCTATGGAACTGAGGTGCCACAG ATGTAGAAGTGCACATCCAAATATTCCGCGGTTAAAATCACATATTAGCAGCTGCCAAGCTCCCTTTCCCTCTTACCTAC TTGAAAATGGACGTTTGATGCATGCACCAGGTGAACCCCACAACAATTTATAGTATTACAGGTTTTTGAGTTAGTTTTTT CAGTACCCTGAGGTAAAATCCCCATTGTGTAGATAAAGACTGAAGACTTTTTGCAATCTATAGAGAATGTTTATTTTCAT CTTGCATTAACGGGTCACATTTGATGGTTCAACTTCAAATCCTGCAAAGAGCTACTATGGCTTGATGGATATTCAATTAA GCTATACCCAATTGCATTTTCTATTGATATAGCAATTCAAATTGAGAAGCGAATTAGCAAATGTTTTCATTAAATTTTCA GCTACAACGACCTCAGAGAACATTCTATCAAATTGATTAGTTTAGTAAGTTGTGTTAATTAAGAGTGAACTTGTGTCCCT CTTTATATTCAGCTTAGCACATTAG
CDS sequence (LotjaGi5g1v0162600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGAGATGGAGATGGAGATGGACGAAACTTCTGAACCCAAAGAGGAAAAGCCCGTTTTGGTGATCTTAGTGGGAGC ACCGGGAAGCGGGAAATCCACCTTCTGTGAACAAGTTATGCGTTCCTCTTCTCGCCCTTGGGTTCGCGTTTGCCAGGACA CTATTGGAAATGGTAAAGCAGGAAATAAAGCCCAGTGCCTAACCAGTGCAACTAGAGCATTGAAGGATGGAAAGAGTGTA TTTATTGACCGGTGCAATCTTGACAGAGATCAGCGCTTAGATTTCATGAAGCTTGCTGATGGACCCCAAATAGATGTCCA TGCAGTTGTACTTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCTGTAAAACGAACTGGGCATGAAGGAAATCTGCAGG GTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAAAAGAAAGAGATGCCAAAATTAAGTGAAGGTTTTAACCGAATA ACATTTTGTCAGAGTGACAGTGATGTCAAAGATGCCATTAATACTTACAGCACGCTAAAGCCACTGGATAATCTTCCACA TGGCTGCTTTGGCCAAAAGAATCCAGATTCCAAAATTCAAGTCGGTATAATGAAGTTCCTTAAAAGAGCAGAGGTCCCAG TTAATGCTGCATCTGGAGAAAAGGGCACTGAAGAATCCACTTCTGAGACACCGGGAAAAAATGATACCTGCTGCAAAGAT ATGGAAAAGATTCCCTCAATTCCACCTGATGCCAACTTAGAGTCAAAGGAAATAGAAGATCAAGCTGTTGGCTCTGCTGG CTCCCATGCCAATCGAGTTTCTCTGGATGATACTCCCACTCTGGCATTTCCATCTATTTCAACAGCTGATTTCCAATTCA ACTATGAGAAAGCAGCTGATATTATTGTTGAGAAGGTTGCAGAGTTCTCAAATAAGCCGTGGAATGCCAGACTTGTTCTA GTTGACTTGACTCATAAGTCAAAGATTCTGTCCTTAGTTAAAGCTAAAGCAGCAGAGAAATGCATTGACACCCAAAAGTT CTCTACCCATGTTGGAGACATTACTCGTCTTCATTCCACAGGAGGTTTGCGCTGTAATGTAATAGCTAATGCTGCCAACT GGCGGTTAAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAACGCTGCAGGTCCTGAGCTAGAGTCTGCAACTAAA GAAAAAGTAAAATCTCTTTCACCTGGGAATGCTGTTGTTGTCCCTCTACCACCATCTTCTCCCTTGTTCACTAGAGAGGG TGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAACGACCAAATTATCTGGATAATGATTATAATAAAG GCTCTAAAATTCTCCAAGATGCTTATGCTTCACTATTTGAAGGTTTTGCATCTATTGTGAGGAACCAAGCAGAGCAACCT AGTGGAAGAAATGAAAACCTTGAAAGAAAGTTCTTGGAGTTGAAGGATCAATCAGAACACTGCTCTAGAAATCATTTCAC AAACACTGTTCAAAAGAGTAAGAGAGATTCTTATCATGGGTCGGAAAAAAGCAAGAAATACAAGGAAACTCAGGATGGTT TTGGAGTGGCCTTTACTGATTCTAATGTTGAAAAGGCAGATTCAGAGCATAGAAGAACTGATGTGAGCAAGAGTAAAGCC TGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGAATCCTGAAAAGCATAAGGATGATTTGCTTGAAATATCAGA AGATGTTGTTGTGTTGAATGATCTGTATCCTAAGGCAAAGAAGCATGTTCTGGTATTAGCACGAACTGGAGGTCTTGATT GCCTGGCAGATGTCCAAGGTGCTCACCTTCAGTTATTGAAGACAATGCATGCTGTGGGTTTAAAGTGGGCTGAGAAGTTC TTGCACGAGAGTGCATCACTGGTCTTTCGCCTTGGATATCATTCGGCTCCATCAATGCGGCAACTACACTTGCATGTTAT CAGCCAGGACTTCGAATCAAAACATTTGAAGAACAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGTGACTCGG TAGATGTAATTGATGAGGTTGAGGTCTCTAATCATGGAAAAGCAGCACTGAAAGATGATGATAAGCTCATGTCTATGGAA CTGAGGTGCCACAGATGTAGAAGTGCACATCCAAATATTCCGCGGTTAAAATCACATATTAGCAGCTGCCAAGCTCCCTT TCCCTCTTACCTACTTGAAAATGGACGTTTGATGCATGCACCAGGTGAACCCCACAACAATTTATAG
Protein sequence (LotjaGi5g1v0162600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMEMEMEMDETSEPKEEKPVLVILVGAPGSGKSTFCEQVMRSSSRPWVRVCQDTIGNGKAGNKAQCLTSATRALKDGKSV FIDRCNLDRDQRLDFMKLADGPQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKEMPKLSEGFNRI TFCQSDSDVKDAINTYSTLKPLDNLPHGCFGQKNPDSKIQVGIMKFLKRAEVPVNAASGEKGTEESTSETPGKNDTCCKD MEKIPSIPPDANLESKEIEDQAVGSAGSHANRVSLDDTPTLAFPSISTADFQFNYEKAADIIVEKVAEFSNKPWNARLVL VDLTHKSKILSLVKAKAAEKCIDTQKFSTHVGDITRLHSTGGLRCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATK EKVKSLSPGNAVVVPLPPSSPLFTREGVTHVIHVLGPNMNPQRPNYLDNDYNKGSKILQDAYASLFEGFASIVRNQAEQP SGRNENLERKFLELKDQSEHCSRNHFTNTVQKSKRDSYHGSEKSKKYKETQDGFGVAFTDSNVEKADSEHRRTDVSKSKA WGSWAQALHQIAMNPEKHKDDLLEISEDVVVLNDLYPKAKKHVLVLARTGGLDCLADVQGAHLQLLKTMHAVGLKWAEKF LHESASLVFRLGYHSAPSMRQLHLHVISQDFESKHLKNKKHWNSFNTAFFRDSVDVIDEVEVSNHGKAALKDDDKLMSME LRCHRCRSAHPNIPRLKSHISSCQAPFPSYLLENGRLMHAPGEPHNNL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Gene3D | 2 | 178 | 177 | 5.2E-38 | – | |
| SUPERFAMILY | 16 | 163 | 148 | 1.27E-17 | ||
| Phobius | 20 | 27 | 8 | - | – | |
| Pfam | 21 | 147 | 127 | 3.2E-14 | – | |
| CDD | 23 | 46 | 24 | 0.0013833 | – | |
| Phobius | 28 | 31 | 4 | - | – | |
| PANTHER | 29 | 757 | 729 | 1.4E-138 | – | |
| PANTHER | 29 | 757 | 729 | 1.4E-138 | – | |
| Phobius | 32 | 768 | 737 | - | – | |
| MobiDBLite | 216 | 252 | 37 | - | – | |
| MobiDBLite | 220 | 234 | 15 | - | – | |
| Gene3D | 245 | 334 | 90 | 2.0E-5 | ||
| SUPERFAMILY | 277 | 325 | 49 | 9.42E-5 | ||
| SUPERFAMILY | 328 | 466 | 139 | 1.19E-19 | ||
| ProSiteProfiles | 334 | 514 | 181 | 10.981 | ||
| Gene3D | 335 | 477 | 143 | 1.2E-20 | ||
| SMART | 346 | 481 | 136 | 4.4E-4 | ||
| Pfam | 369 | 451 | 83 | 8.1E-7 | ||
| Coils | 484 | 504 | 21 | - | – | |
| MobiDBLite | 509 | 529 | 21 | - | – | |
| SUPERFAMILY | 559 | 727 | 169 | 1.22E-31 | ||
| Gene3D | 563 | 745 | 183 | 3.2E-48 | ||
| Pfam | 570 | 681 | 112 | 2.7E-24 | – | |
| ProSitePatterns | 650 | 668 | 19 | - | ||
| Pfam | 686 | 742 | 57 | 1.6E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0162600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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