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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0181400 |
| Transcript ID | LotjaGi5g1v0181400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|B5U8K1|B5U8K1_LOTJA Legumin storage protein 2; Found in the gene: LotjaGi5g1v0181400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:46254078..46256620) extracted from Lotus japonicus Gifu genome v1.2.
GTGAAGCCACCTCCTCTTACAAACCTCATGAGGTGTAACAAAATTAGGGTTTTGAAGCCATGCAAGATGAAGAATGTCAT CACCAGAGCAATGACGTGTCCCTCCATGAACCTTCTCTCCTTCCTATAAATCACCACGCCTCAGGTTCTCCGCTTCACCA CAGCAAGGAACAAACAACATTCCTCAATAATAACAATGGCCAAACCTTTCGTGCTCTCTCTTTGCTTACTGCTCTTCACG AGCACCTGCTTAGCTCGGTCCTTTGATTGGTCCGACCGGTTTAGTCAATGCCAGCTTGACAGAATTAACGTGTTGGAGCC TGACAACCGCGTTGAGTCTGAAGCTGGCTTGATTGAGACATGGAGCCCCAGCCAGAGCCCCGAGCTACAATGCGCCGGGG TGTCTGTTGTCCGACGCACTATCCAACCCAAAGGACTCCACTTGCCATCCTTCACTCCTTCTCCACAGCTGATTATGATC GTCCAAGGTTGATTAATATATAATTCTCTTATATTATAATTTCCACTCTCATATATAATTAATTGATATTAATTGTTTTA TGCGGTAATTATATATAACTTAATTAATTTATATATGCAGGAAGGGGTGCTTTAGGAATTGCAATTCCTGGGTGTCCTGA GACGTATGAAGAGCCACAATCACAATCAAGACAAGGAAGAAGGGGAGGAAGCTCACGGCAGCAAAGAGACAGGCACCAGA AGATTCGTCACTTCAGTCCCGGTGATATCATTGCCATTCCACCTGGAATCCCTTACTGGACTTACAACTACGGCAATGAA CCTGCCATTGCCATCAGTCTCATTGACACCTCCAACTTTGCAAACCAGCTTGATCAAACCCCAAGAGTATGCATTATATA TTATGCACCATGTGGATCAACTAAATTATATCGTGTGTGCTTGAATCCATTAATTATTGCATGCAGGTGTTTTATCTTGC CGGAAATCCAGCGATAGAGCACCCAGAGACCCAGCAGAGCCAGAGGCAACCACGCCGTGAGTCCCCCGGTGGACGCAGGC ATGGCCAGCACCACCAGGAGTCTGAGCAGGAGGAGGAAGAAGGTGGCAGTATCCTCAGCGGCTTCGGCGCAGAGTTTTTG CAACAAGTTTTCAACATCGACCATGACACCGCAAAGCAACTCCAATCCTCAGATGATCAGAGGAGGCAAATTGTGAAGGT GGAGGGCGATGATCTCAGCTTTATTAGCCCCGAAAGTGCAGACGAAGACGAAGATGAAGAAGATGAAGATGAAGATCAAG AGCAACATGGACGCCACTCACGTCCCTCCGGACGAAGAACTAGAAGACCCAGCAGGGAGGAGGACGAAGATGAGGATGAA GATGAAGAAGAGAGACAAGGAGGAGGACGTGGACGTGGAGAAAGACAAAGACATTTCGAGAGGGAAGAAGAAGAAGAGCG TGAAGAACGTGGACCACGAGGACGAGGAAAGCATTGGCAGAGGGAAGAAGAAGAGGAAGAAGAAGAATCACGCCGGACAA TTCCATCTAGGAGAGAGAGCAGGGGAAGGGGAGGATGCAGAACTAGCAATGGTCTTGAGGAAAACTTCTGCACCTTGAAG ATTCACGAGAACATCAACCGCCCTTCACGCGCCGATCTCTACAATCCACGCGCCGGTCGCATCAGTGACATCAACAGCCT CACCCTCCCAATCCTCCGCTTTTTAGGTCTCAGTGCTGAATACGTAAATCTCTACCAGGTATATATATACAATGATTATT TACTATATAATAAAGTTCATTGTATGTATAAGGTGACATTAATCTTTATATGATATCCATGCATGCATCTGCAGAATGGA ATCTATGGTCCACACTGGAACATCAATGCAAACAGCATCATTTACGTGGTGAGAGGCCGAGGAAGGGTTCGCATAGTGAA CTGCCAGGGGCAAGCAGTGTTCAATGACGAGCTCAGGAAGGGACAATTGCTGGTGGTGCCACAGAACTTCGTGGTGGCGC AACAAGCACAAGATGAAGGATTCGAGTATGTGGTGTTCAAGACCAATGCTAGAGCTGCCGTGAGCCATGTCAAGCAGGTG TTCAGGGCCACCCCTGCCGAGGTTCTCTCCAACGCCTTCGGTATTCGCCAGCGTGATATCAGTGATCTCAAGTTCAGCGG AAACTGGGGCCCTCTGGTCAACCCTGACAATACCCAATCTCGATCACGAGACAGTGTCATTGCTAAGGTTGCATGAAAGT TAAAATCGAGGATGTAATAATGTTACCGAGATGAGATGGCTAGCCATCTTAGAATAATAAAAAAATAAGTTCCGGCTCTA GTTGTAACTTGTAACACCTTCGGTTCCACTTGTTTTTGAATAATAAAAGCAAATATGGCTTTATGTACCGTTTTCTCTAT GAGCTAGCCTTTAATTTTAATCGGATAAAACTTACATAGCCTTTCTCTATGGGTACTATGTAAGAATTATTTATTAATTC TTGTGGGCTTCAATCAATTGCAATTTTTGTTTTAATAAAAACTGGCTAATTCATGATCCAGAG
CDS sequence (LotjaGi5g1v0181400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAACCTTTCGTGCTCTCTCTTTGCTTACTGCTCTTCACGAGCACCTGCTTAGCTCGGTCCTTTGATTGGTCCGA CCGGTTTAGTCAATGCCAGCTTGACAGAATTAACGTGTTGGAGCCTGACAACCGCGTTGAGTCTGAAGCTGGCTTGATTG AGACATGGAGCCCCAGCCAGAGCCCCGAGCTACAATGCGCCGGGGTGTCTGTTGTCCGACGCACTATCCAACCCAAAGGA CTCCACTTGCCATCCTTCACTCCTTCTCCACAGCTGATTATGATCGTCCAAGGAAGGGGTGCTTTAGGAATTGCAATTCC TGGGTGTCCTGAGACGTATGAAGAGCCACAATCACAATCAAGACAAGGAAGAAGGGGAGGAAGCTCACGGCAGCAAAGAG ACAGGCACCAGAAGATTCGTCACTTCAGTCCCGGTGATATCATTGCCATTCCACCTGGAATCCCTTACTGGACTTACAAC TACGGCAATGAACCTGCCATTGCCATCAGTCTCATTGACACCTCCAACTTTGCAAACCAGCTTGATCAAACCCCAAGAGT GTTTTATCTTGCCGGAAATCCAGCGATAGAGCACCCAGAGACCCAGCAGAGCCAGAGGCAACCACGCCGTGAGTCCCCCG GTGGACGCAGGCATGGCCAGCACCACCAGGAGTCTGAGCAGGAGGAGGAAGAAGGTGGCAGTATCCTCAGCGGCTTCGGC GCAGAGTTTTTGCAACAAGTTTTCAACATCGACCATGACACCGCAAAGCAACTCCAATCCTCAGATGATCAGAGGAGGCA AATTGTGAAGGTGGAGGGCGATGATCTCAGCTTTATTAGCCCCGAAAGTGCAGACGAAGACGAAGATGAAGAAGATGAAG ATGAAGATCAAGAGCAACATGGACGCCACTCACGTCCCTCCGGACGAAGAACTAGAAGACCCAGCAGGGAGGAGGACGAA GATGAGGATGAAGATGAAGAAGAGAGACAAGGAGGAGGACGTGGACGTGGAGAAAGACAAAGACATTTCGAGAGGGAAGA AGAAGAAGAGCGTGAAGAACGTGGACCACGAGGACGAGGAAAGCATTGGCAGAGGGAAGAAGAAGAGGAAGAAGAAGAAT CACGCCGGACAATTCCATCTAGGAGAGAGAGCAGGGGAAGGGGAGGATGCAGAACTAGCAATGGTCTTGAGGAAAACTTC TGCACCTTGAAGATTCACGAGAACATCAACCGCCCTTCACGCGCCGATCTCTACAATCCACGCGCCGGTCGCATCAGTGA CATCAACAGCCTCACCCTCCCAATCCTCCGCTTTTTAGGTCTCAGTGCTGAATACGTAAATCTCTACCAGAATGGAATCT ATGGTCCACACTGGAACATCAATGCAAACAGCATCATTTACGTGGTGAGAGGCCGAGGAAGGGTTCGCATAGTGAACTGC CAGGGGCAAGCAGTGTTCAATGACGAGCTCAGGAAGGGACAATTGCTGGTGGTGCCACAGAACTTCGTGGTGGCGCAACA AGCACAAGATGAAGGATTCGAGTATGTGGTGTTCAAGACCAATGCTAGAGCTGCCGTGAGCCATGTCAAGCAGGTGTTCA GGGCCACCCCTGCCGAGGTTCTCTCCAACGCCTTCGGTATTCGCCAGCGTGATATCAGTGATCTCAAGTTCAGCGGAAAC TGGGGCCCTCTGGTCAACCCTGACAATACCCAATCTCGATCACGAGACAGTGTCATTGCTAAGGTTGCATGA
Protein sequence (LotjaGi5g1v0181400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKPFVLSLCLLLFTSTCLARSFDWSDRFSQCQLDRINVLEPDNRVESEAGLIETWSPSQSPELQCAGVSVVRRTIQPKG LHLPSFTPSPQLIMIVQGRGALGIAIPGCPETYEEPQSQSRQGRRGGSSRQQRDRHQKIRHFSPGDIIAIPPGIPYWTYN YGNEPAIAISLIDTSNFANQLDQTPRVFYLAGNPAIEHPETQQSQRQPRRESPGGRRHGQHHQESEQEEEEGGSILSGFG AEFLQQVFNIDHDTAKQLQSSDDQRRQIVKVEGDDLSFISPESADEDEDEEDEDEDQEQHGRHSRPSGRRTRRPSREEDE DEDEDEEERQGGGRGRGERQRHFEREEEEEREERGPRGRGKHWQREEEEEEEESRRTIPSRRESRGRGGCRTSNGLEENF CTLKIHENINRPSRADLYNPRAGRISDINSLTLPILRFLGLSAEYVNLYQNGIYGPHWNINANSIIYVVRGRGRVRIVNC QGQAVFNDELRKGQLLVVPQNFVVAQQAQDEGFEYVVFKTNARAAVSHVKQVFRATPAEVLSNAFGIRQRDISDLKFSGN WGPLVNPDNTQSRSRDSVIAKVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| PANTHER | 4 | 571 | 568 | 7.4E-185 | – | |
| PANTHER | 4 | 571 | 568 | 7.4E-185 | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 583 | 563 | - | – | |
| SUPERFAMILY | 24 | 558 | 535 | 5.19E-82 | ||
| Gene3D | 25 | 297 | 273 | 1.8E-105 | ||
| SMART | 37 | 256 | 220 | 7.7E-36 | ||
| Pfam | 38 | 194 | 157 | 3.5E-33 | ||
| MobiDBLite | 109 | 146 | 38 | - | – | |
| MobiDBLite | 127 | 142 | 16 | - | – | |
| MobiDBLite | 196 | 233 | 38 | - | – | |
| MobiDBLite | 210 | 229 | 20 | - | – | |
| MobiDBLite | 271 | 393 | 123 | - | – | |
| MobiDBLite | 279 | 296 | 18 | - | – | |
| MobiDBLite | 329 | 388 | 60 | - | – | |
| ProSitePatterns | 394 | 416 | 23 | - | ||
| PRINTS | 406 | 423 | 18 | 6.1E-49 | ||
| SMART | 407 | 553 | 147 | 2.8E-49 | ||
| Pfam | 408 | 549 | 142 | 5.8E-35 | ||
| Gene3D | 410 | 575 | 166 | 1.1E-45 | ||
| PRINTS | 429 | 449 | 21 | 6.1E-49 | ||
| PRINTS | 475 | 491 | 17 | 6.1E-49 | ||
| PRINTS | 493 | 508 | 16 | 6.1E-49 | ||
| PRINTS | 511 | 529 | 19 | 6.1E-49 | ||
| PRINTS | 530 | 547 | 18 | 6.1E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi5g1v0181400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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