Domain Predictions — View

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PS00305

Source: ProSitePatterns

Description

11-S plant seed storage proteins signature.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4483940.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Legumin storage protein 5 [Lotus japonicus] gi\|206712292\|emb\|CAR78996.1\|	Domains G3DSA:2.60.120.10 IPR006044 IPR006045 IPR011051 IPR014710 IPR022379 NON_CYTOPLASMIC_DOMAIN PF00190 PR00439 PS00305 PS51257 PTHR31189 PTHR31189:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00835 SSF51182 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE mobidb-lite	23
Lj1g3v4483950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Legumin storage protein 5 [Lotus japonicus] gi\|206712292\|emb\|CAR78996.1\|	Domains G3DSA:2.60.120.10 IPR006044 IPR006045 IPR011051 IPR014710 IPR022379 PF00190 PR00439 PS00305 PTHR31189 PTHR31189:SF1 SM00835 SSF51182 mobidb-lite	14
Lj1g3v4495360.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Legumin storage protein 5 [Lotus japonicus] gi\|206712292\|emb\|CAR78996.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.120.10 IPR006044 IPR006045 IPR011051 IPR014710 IPR022379 NON_CYTOPLASMIC_DOMAIN PF00190 PR00439 PS00305 PS51257 PTHR31189 PTHR31189:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00835 SSF51182 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix TRANSMEMBRANE mobidb-lite	26
LotjaGi1g1v0709000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp\|P11828\|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr\|B5U8K6\|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709000	Domains G3DSA:2.60.120.10 IPR006044 IPR006045 IPR011051 IPR014710 IPR022379 NON_CYTOPLASMIC_DOMAIN PF00190 PR00439 PS00305 PS51257 PTHR31189 PTHR31189:SF37 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00835 SSF51182 SignalP-TM SignalP-noTM mobidb-lite	22
LotjaGi1g1v0709200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp\|P11828\|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr\|B5U8K6\|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709200	Domains G3DSA:2.60.120.10 IPR006044 IPR006045 IPR011051 IPR014710 IPR022379 NON_CYTOPLASMIC_DOMAIN PF00190 PR00439 PS00305 PS51257 PTHR31189 PTHR31189:SF37 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00835 SSF51182 SignalP-TM SignalP-noTM mobidb-lite	22
LotjaGi5g1v0181400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp\|P02858\|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr\|B5U8K1\|B5U8K1_LOTJA Legumin storage protein 2; Found in the gene: LotjaGi5g1v0181400	Domains G3DSA:2.60.120.10 IPR006044 IPR006045 IPR011051 IPR014710 IPR022379 NON_CYTOPLASMIC_DOMAIN PF00190 PR00439 PS00305 PTHR31189 PTHR31189:SF35 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00835 SSF51182 SignalP-TM SignalP-noTM mobidb-lite	21
LotjaGi5g1v0181600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp\|P02858\|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr\|B5U8K2\|B5U8K2_LOTJA Legumin storage protein 3; Found in the gene: LotjaGi5g1v0181600	Domains G3DSA:2.60.120.10 IPR006044 IPR006045 IPR011051 IPR014710 IPR022379 NON_CYTOPLASMIC_DOMAIN PF00190 PR00439 PS00305 PTHR31189 PTHR31189:SF35 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00835 SSF51182 SignalP-TM SignalP-noTM mobidb-lite	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29