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IPR022379

Description

IPR022379 is a 11-S seed storage protein, conserved site.

<p>Plant seed storage proteins, whose principal function appears to be the major nitrogen source for the developing plant, can be classified, on the basis of their structure, into different families. 11-S are non-glycosylated proteins which form hexameric structures [[cite:PUB00001358], [cite:PUB00004572]]. Each of the subunits in the hexamer is itself composed of an acidic and a basic chain derived from a single precursor and linked by a disulphide bond. This structure is shown in the following representation.</p> <pre> +-------------------------+ | | xxxxxxxxxxxCxxxxxxxxxxxxxxxxxxxxxxNGxCxxxxxxxxxxxxxxxxxxxxxxx |------Acidic-subunit-------------||-----Basic-subunit------| |-----------------About-480-to-500-residues-----------------| 'C': conserved cysteine involved in a disulphide bond. </pre> <p>Members of the 11-S family include pea and broad bean legumins, oil seed rape cruciferin, rice glutelins, cotton beta-globulins, soybean glycinins, pumpkin 11-S globulin, oat globulin, sunflower helianthinin G3, etc. This family represents the precursor protein which is cleaved into the two chains. These proteins contain two β-barrel domains. This family is a member of the 'cupin' superfamily on the basis of their conserved barrel domain ('cupa' is the Latin term for a small barrel).</p> <p>The signature pattern for this family includes the conserved cleavage site between the acidic and basic subunits (Asn-Gly) and a proximal cysteine residue which is involved in the inter-chain disulphide bond.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript Name Description Predicted domains Domain count
Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| 23
Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| 14
Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| 26
11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P11828|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr|B5U8K6|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709000 22
11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P11828|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr|B5U8K6|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709200 22
11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|B5U8K1|B5U8K1_LOTJA Legumin storage protein 2; Found in the gene: LotjaGi5g1v0181400 21
11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|B5U8K2|B5U8K2_LOTJA Legumin storage protein 3; Found in the gene: LotjaGi5g1v0181600 21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 14.29