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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0181600 |
| Transcript ID | LotjaGi5g1v0181600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|B5U8K2|B5U8K2_LOTJA Legumin storage protein 3; Found in the gene: LotjaGi5g1v0181600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:46280328..46283529) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAATTTCCTTTTGAAATTAAACTCTTGATGAGATGCGGAGAACTGCAGAAGTGGTCCCCAATGCATGCACAATTCAT TTAGCTGCAGAGTTCCAGAAATGAAATAAAGCATGCAGGCATATATACAAACAATGTCATACTTTGGATCATTATGTGAA GCGTGAAGCCACCTGCTCTTACAAACCTCATGAGGTGTAACAAAATTAGGGTTAGGAATCCATGCAAGCTGAAGAGTGTC ATCACCACAGCAATGACGTGTCCCTCCATGAACCTTCTCTCCTTCCTATAAATCACCACGCCTCAGGTTCTCCGCTTCAC CACAGCAAGGAACAAACACTAACATTCCTCAATCACAATGGCCAAGCCTTTCATACTCTCCCTTTGCTTACTTCTCTTCA CGAGCACCTGCTTAGCTCGGTCCTCTGATTGGTCCGACCGATTCAGTCAATGCCAGCTTGACAGAATCAACGCGTTGGAG CCTGACAATCGCGTTGAGTCTGAAGCTGGCTTGATTGAGACATGGAGCCCCAGACAGAGCCCCGAGCTACAATGCGCTGG GGTGTCTGTCGTCCGATGCACCATCCAACCCAAAGGACTCCACTTGCCATCCTTCACTCCTTCTCCACAGCTGATTATGG TCATCCAAGGTAGGTTCATATATAATTCTTTTCTTATAATATTATTTCCAATCTAATATATGACTAATTAATATTAATTG CTTTGTTTTGTTTGGTAACTAAATTAATTTATATATCCAGGGAGGGGTGCTTTAGGAATTGCAATTCCTGGGTGTCCTGA GACGTATGAAGAGCCACAATCACAATCAAGACAAGGAAGAAGGGGAGGAAGCTCACGGCAGCAAAGAGACAGGCACCAGA AGATTCGTCACTTCAGTCCCGGTGATATCATTGCCATTCCACCTGGAATCCCTTACTGGACTTACAACTACGGCAATGAA CCTGCCATTGCCATCAGTCTCATTGACACCTCCAACTTTGCAAACCAGCTTGATCAAACCCCAAGAGTATGCATTATATA TTATGCACCATGTGGATCAACTAAATTATATCGTGTGTGCTTGAATCCATTAATTATTGCATGCAGGTGTTTTATCTTGC CGGAAATCCAGCGATAGAGCACCCAGAGACCCAGCAGAGCCAGAGGCAACCACGCCGTGAGTCCCCCGGTGGACGCAGGC ATGGCCAGCACCACCAGGAGTCTGAGCAGGAGGAGGAAGAAGGTGGCAGCATCCTCAGCGGCTTCGGCGCAGAGTTTTTG CAACAAGTTTTCAACATCGACCATGACACCGCAAAGCAACTCCAATCCCCAGATGATCAGAGGAGGCAAATTGTGAAGGT GGAGGGCGATGATCTCAGCTTTATTAGCCCCGAAAGTGCAGACGAAGACGAAGATGAAGAAGATGAAGATGAAGATCAAG AGCAACATGGACGCCACTCACGTCCCTCCGGACGAAGAACTAGAAGACCCAGCAGGGAGGAGGACGAAGATGAGGATGAA GATGAAGAAGATGAACAGCAACATGGACGCCGCTCACGTCACTCGGGACGAAGAACAAGAAGGCACAGCAGAGAGGAGGA GGAAGATGAGGATGAAGATGAAGAAGAGAGACAAGGAGGTCGTGGACGTGGAGAAAGACAAAGACATTTCGAGAGGGAAG AAGAAGAAGAGCGTGAAGAACGTGGACCACGAGGACGAGGAAAGCATTGGCAGAGGGAAGAAGAAGAGGAAGAAGAAGAA TCACGCCGGACAATTCCATCTAGGAGAGAGAGCAGGGGAAGGGGAGAATGCAGAACTCGCAATGGTCTTGAGGAAAATTT CTGCACCTTGAAGATTCACGAGAACATCAACCGCCCTTCACGCGCTGACCTCTACAATCCACGCGCAGGTCGCATCAGTG ACATCAACAGCCTCACCCTCCCAATCCTCCGCTTTTTAGGTCTCAGTGCTGAATACGTAAATCTCTACCAGGTATATATA TACAATGATTATTTACTATATAATAAAGTTCATTGTATGTATAAGGTGACATTAATCTTTATATGATATCCATGCATGCA TGTGCAGAATGGAATCTATGGTCCACACTGGAACATCAATGCAAACAGCATCATTTACGTGGTGAGAGGCCGAGGAAGGG TTCGCATAGTGAACTGCCAGGGGCAAGCAGTGTTCAATGACGAGCTCAGGAAGGGACAATTGCTGGTGGTGCCACAGAAC TTCGTGGTGGCGCAACAAGCACAAGATGAAGGATTCGAGTATGTGGTGTTCAAGACCAATGCTAGAGCTGCCGTGAGCCA TGTCAAGCAGGTGTTCAGGGCCACCCCTGCTCAGGTTCTTGCCAATGCCTTCGGCATTCGCCAGCGTGATGTTAGTGATC TCAAGTTCAGCGGAAACTGGGGCCCTCTGATCAACCCTGATAATACCCAATCTCGATCACGAGACAACGTCCTTGCTAAG GTTGCTTGAAAATTATGATCAATGTAATAATGTTACTGAGATGAGATGGCTAGCCATCTAAGAATAATAAAAAAAATAAG TTTTGGCTCTAGTTGTAACTTGTAACAGCATCGGTTTCGGTTGTTTTTGAATAATAAAAGCATATATGGCTTTATGTACC CTTTCTCTATGAGCTAGCCTTTAATTTTACTCGGATAAAACTTACATATAGTAATATGGGTTCAAATGTGGGTTCATCAC ACCTACTATACTCATGTTATTCTCTACAAACAATGCATTGTTAGGACATGAATGTGTTATAGTAGACAGAAGCTTCAAAC TTAGAACACACATTTTCATTGAATAAAGCCCCTGCCTCTACCTCAGACGTATCTGATCTGCTACCCCTAAGCATGAAATC CTTGACCATTACCACCATAGAGAGGCTGAAAAATGTTCAACTGAAAATTCAGCTGATTCATGAGCTTAAGGATGTACTGA AGATGAGGGTACTGAAGAATCAACAATAAATGGAAAACAACTTAGAAAAGTGATTATTTGAGTCTTCTAATTTCCATTTT GTTTCTTGTCAGTGGCCAAGCATTAGCTAACTTAAAGAGATTGTTTTGCAGGGACAGCCAACTCCAAAATATGATAGCCA AAGTTTCTTCTATTCTATTTTTTAGAAACAGTATTGTGAATTGTGATTATGCTTTGTGCTGCATCCTGGGATTTTATTTG GA
CDS sequence (LotjaGi5g1v0181600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAGCCTTTCATACTCTCCCTTTGCTTACTTCTCTTCACGAGCACCTGCTTAGCTCGGTCCTCTGATTGGTCCGA CCGATTCAGTCAATGCCAGCTTGACAGAATCAACGCGTTGGAGCCTGACAATCGCGTTGAGTCTGAAGCTGGCTTGATTG AGACATGGAGCCCCAGACAGAGCCCCGAGCTACAATGCGCTGGGGTGTCTGTCGTCCGATGCACCATCCAACCCAAAGGA CTCCACTTGCCATCCTTCACTCCTTCTCCACAGCTGATTATGGTCATCCAAGGGAGGGGTGCTTTAGGAATTGCAATTCC TGGGTGTCCTGAGACGTATGAAGAGCCACAATCACAATCAAGACAAGGAAGAAGGGGAGGAAGCTCACGGCAGCAAAGAG ACAGGCACCAGAAGATTCGTCACTTCAGTCCCGGTGATATCATTGCCATTCCACCTGGAATCCCTTACTGGACTTACAAC TACGGCAATGAACCTGCCATTGCCATCAGTCTCATTGACACCTCCAACTTTGCAAACCAGCTTGATCAAACCCCAAGAGT GTTTTATCTTGCCGGAAATCCAGCGATAGAGCACCCAGAGACCCAGCAGAGCCAGAGGCAACCACGCCGTGAGTCCCCCG GTGGACGCAGGCATGGCCAGCACCACCAGGAGTCTGAGCAGGAGGAGGAAGAAGGTGGCAGCATCCTCAGCGGCTTCGGC GCAGAGTTTTTGCAACAAGTTTTCAACATCGACCATGACACCGCAAAGCAACTCCAATCCCCAGATGATCAGAGGAGGCA AATTGTGAAGGTGGAGGGCGATGATCTCAGCTTTATTAGCCCCGAAAGTGCAGACGAAGACGAAGATGAAGAAGATGAAG ATGAAGATCAAGAGCAACATGGACGCCACTCACGTCCCTCCGGACGAAGAACTAGAAGACCCAGCAGGGAGGAGGACGAA GATGAGGATGAAGATGAAGAAGATGAACAGCAACATGGACGCCGCTCACGTCACTCGGGACGAAGAACAAGAAGGCACAG CAGAGAGGAGGAGGAAGATGAGGATGAAGATGAAGAAGAGAGACAAGGAGGTCGTGGACGTGGAGAAAGACAAAGACATT TCGAGAGGGAAGAAGAAGAAGAGCGTGAAGAACGTGGACCACGAGGACGAGGAAAGCATTGGCAGAGGGAAGAAGAAGAG GAAGAAGAAGAATCACGCCGGACAATTCCATCTAGGAGAGAGAGCAGGGGAAGGGGAGAATGCAGAACTCGCAATGGTCT TGAGGAAAATTTCTGCACCTTGAAGATTCACGAGAACATCAACCGCCCTTCACGCGCTGACCTCTACAATCCACGCGCAG GTCGCATCAGTGACATCAACAGCCTCACCCTCCCAATCCTCCGCTTTTTAGGTCTCAGTGCTGAATACGTAAATCTCTAC CAGAATGGAATCTATGGTCCACACTGGAACATCAATGCAAACAGCATCATTTACGTGGTGAGAGGCCGAGGAAGGGTTCG CATAGTGAACTGCCAGGGGCAAGCAGTGTTCAATGACGAGCTCAGGAAGGGACAATTGCTGGTGGTGCCACAGAACTTCG TGGTGGCGCAACAAGCACAAGATGAAGGATTCGAGTATGTGGTGTTCAAGACCAATGCTAGAGCTGCCGTGAGCCATGTC AAGCAGGTGTTCAGGGCCACCCCTGCTCAGGTTCTTGCCAATGCCTTCGGCATTCGCCAGCGTGATGTTAGTGATCTCAA GTTCAGCGGAAACTGGGGCCCTCTGATCAACCCTGATAATACCCAATCTCGATCACGAGACAACGTCCTTGCTAAGGTTG CTTGA
Protein sequence (LotjaGi5g1v0181600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKPFILSLCLLLFTSTCLARSSDWSDRFSQCQLDRINALEPDNRVESEAGLIETWSPRQSPELQCAGVSVVRCTIQPKG LHLPSFTPSPQLIMVIQGRGALGIAIPGCPETYEEPQSQSRQGRRGGSSRQQRDRHQKIRHFSPGDIIAIPPGIPYWTYN YGNEPAIAISLIDTSNFANQLDQTPRVFYLAGNPAIEHPETQQSQRQPRRESPGGRRHGQHHQESEQEEEEGGSILSGFG AEFLQQVFNIDHDTAKQLQSPDDQRRQIVKVEGDDLSFISPESADEDEDEEDEDEDQEQHGRHSRPSGRRTRRPSREEDE DEDEDEEDEQQHGRRSRHSGRRTRRHSREEEEDEDEDEEERQGGRGRGERQRHFEREEEEEREERGPRGRGKHWQREEEE EEEESRRTIPSRRESRGRGECRTRNGLEENFCTLKIHENINRPSRADLYNPRAGRISDINSLTLPILRFLGLSAEYVNLY QNGIYGPHWNINANSIIYVVRGRGRVRIVNCQGQAVFNDELRKGQLLVVPQNFVVAQQAQDEGFEYVVFKTNARAAVSHV KQVFRATPAQVLANAFGIRQRDVSDLKFSGNWGPLINPDNTQSRSRDNVLAKVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| PANTHER | 4 | 602 | 599 | 4.9E-185 | – | |
| PANTHER | 4 | 602 | 599 | 4.9E-185 | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| SUPERFAMILY | 7 | 589 | 583 | 6.77E-83 | ||
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 614 | 594 | - | – | |
| Gene3D | 25 | 295 | 271 | 7.6E-106 | ||
| SMART | 37 | 256 | 220 | 5.1E-36 | ||
| Pfam | 38 | 194 | 157 | 1.2E-33 | ||
| MobiDBLite | 108 | 146 | 39 | - | – | |
| MobiDBLite | 127 | 142 | 16 | - | – | |
| MobiDBLite | 196 | 233 | 38 | - | – | |
| MobiDBLite | 210 | 229 | 20 | - | – | |
| MobiDBLite | 271 | 420 | 150 | - | – | |
| MobiDBLite | 279 | 296 | 18 | - | – | |
| MobiDBLite | 360 | 420 | 61 | - | – | |
| ProSitePatterns | 425 | 447 | 23 | - | ||
| PRINTS | 437 | 454 | 18 | 1.2E-48 | ||
| SMART | 438 | 584 | 147 | 1.6E-49 | ||
| Pfam | 439 | 581 | 143 | 4.9E-35 | ||
| Gene3D | 441 | 606 | 166 | 5.5E-46 | ||
| PRINTS | 460 | 480 | 21 | 1.2E-48 | ||
| PRINTS | 506 | 522 | 17 | 1.2E-48 | ||
| PRINTS | 524 | 539 | 16 | 1.2E-48 | ||
| PRINTS | 542 | 560 | 19 | 1.2E-48 | ||
| PRINTS | 561 | 578 | 18 | 1.2E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi5g1v0181600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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