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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0201800 |
| Transcript ID | LotjaGi5g1v0201800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lysine-specific demethylase; TAIR: AT1G08620.1 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; Swiss-Prot: sp|C0SUT9|JMJ16_ARATH Putative lysine-specific demethylase JMJ16; TrEMBL-Plants: tr|K7N4Y4|K7N4Y4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0201800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50161856..50171910) extracted from Lotus japonicus Gifu genome v1.2.
CATGCACTATCAAGTTTCAAACAAAAAAAAAATAGAAAAAAAACCCAAAAGAAGAAAGAAAAAAAACGCTTACACATAGA GGATGCAGATTTATCTATGTTTCTTCGTGTTAATCTTGTTCTTCCTCAAATTTCTTAGGGTTTGTGAAATTTCCAGTTAC TCTCCAATTCTTCACGCTCCTCGTTCTCACCACAATTCTACTACAGGATTTTGAATTTATGCTTTTCCTTTTGACGGATT CACCATTGTTTCAACACAAAAATTTTCCTGTTTCAATCCATGCAGTAGAACTTCACAATTCATCACGATAGGGTATGATC TTCCGTTTTTTGTTAGGATTTTAGCTAATTACCGTTAATTTGCTTAATTATAGTAAGATTGACTAAGGAATTATCATTAT CCATTATCTTAATTTAATTACTAGTATTGTTATTGTTAATCAATTGATTAATTAATTTAATTTTTTTGCATGATTTATGT TAACTTAACAATTCCAGATAATATTGTTGTAGTGAGTCTAGATTATTAGGTACGTAGAAATTTTTCGAAAACTGGATCTT TTAGGTTTTTTTTTATGGGATCTGTTAGTGGTTGCTGGATTTGTTTTAGGTTTTTATCTTGTGATCTGGTTGTTGAAATA TGATGGAGTAGGGATTTGGTACACCTGAGGAAGGGTGAAGAATTTTTTTCGAAGGGAGATTAGTGAGAAGAGATAACGAA TGTTGATCATCGCGAGCAGTTAAATGGCACGCACTTTTACTTTGAGCTTGGTCCTTTATTAGCTAGTTCTACTTGATTAA ACATGAATATCATCAACGAAGAAGATATTGAAGTTTAATATGCATTTTTTTGTTCTGATATGTCGCTTCGTCGAATGATT GCGAAGAAAAAATAATTTTACTCGGACAAGAGTAAGGAACTAAGGATAATAATTTTGACTAAATAGAAACTAGTGTGTAA TATTTAGATACTATGTTGCATGCAATGTGCTACATTATCTGAGCTGACTGTCTTTGTTCGTTGTGACATTTCAGATTGGT GCTTTCCAGCTATTTATGAAGTTTTACAAACTCTATCCATCTTTCAATTCATAAGTAAACTTCTTATCAAAGTAAGTTTA ATAAAACATAGAATAGATGTTCGTTTTTGTTTTTCTGCGCGCGTGCGTGTAGATTATGGCATTATCCTGATTTCTTGATT CATACAGGGAAGACAAATCTGAGACATTATTACTCATTGCCTTTTGCATGAGGTTAAAGTTAATGATGGGGACTGAGCTT ATGAGAATAAGTGTAAAAGATGATAATGATGACTATCCATCAGTCCCACCAGGTTTTGAATCATATACATCTTTCTCACT GAAGAGAGTAGAAGGCAATGAGAAACAAGATGATAAGAATATGACCAGTTGTTCAGCCTCTACAAGTGCTTCTGAACCTC AGTCAACTCAGGTGGAAAATGATGGTCAAGTTGGTGGTACTAAAAAGATTTCCAGATCCCTTCGACGAAGACCTTGGATT AACCATGGACATTATGAGAACAATTCAGAGGAAGACTCTGATTGTGAGCGGCTTGATCAAGTCAGTCTAGTCTTATCTTG GTTCATTTTTGTTTGGATGTCTTGATTTTTAAGTGTTATGATTGTTCCTAAATGTATACCTGCACTAATGGTTAGCGTCT TACATATGAATATCAATGCAGAGTTTATCCTCAAGACCTTGTCTTCCTAAGGGAGTTATCCGTGGATGTCCAGATTGCAG TAATTGCCAAAAGGTGGGGATGCATCAGATGAGAAAGGTCTTATTGTGAGAGTGAAAGATTGAAAGTTATTTAATGGTCA CGTGACCACTTAAAGTTGTCATGTGACTTAATGTTTAATCTTGATTGATGTTTTAATCTTGATTGATGTGTTAATCTTGA CCATCTATAACAGTCATGATTAATACCTTTCATTGGCTTATTGGCATCATGAATTAATGAATATACTCTGACCTGTCATG TCCTCTCTCTCCTATATCCGTATATCGTTGTTATTTCTATAACTAGTATTATTATATTAATATAGACATACAGTAATGAT GATATTTACATCAGTGTTGGTAATCGCGGTTCGCGGAAAGCCAAAAATCCACTACTTCAAGCCCTCATAGCAGAAAATAG CGGCGGAAAATAGCGGTGAGCCCACAGAGCGCTACGCTACAGCGCCGCTATAACTGCTATTTGACAATGCTGATATACAT TGCCAAGTTTTATGAGTTGAGATGTACCCTTAATGTTAAAACTTAAGTGCCTTGGTAGACCTTGACATCTAATGAACTGT GTATTGTAATAATGACAACAGAGTGGAAGGGGTAATTTTATCATATATTATAGAGGTTACTTAATCCTAAGTTAGTAAAA AGGGCTCTTCTGTTATTGTGCAACTTTTTGCATGATGAGTAATTGACTTGAAGTTTCTTGCAGGTTGTTGCCGGATGGCG ACCAGAAGATCCTCATAGGCCAAATCTCGATGATGCTCCTGTTTTCTATCCCACTGAAGAGGTCTTGTTCATTTCTTGTG GCGCATTTGAATTCACTTCTGTCCCTGTCATTGATATGTTTACTTCTACAAGTTAGCTTTATTGTGGAATCAAATCTTTG TCTTGTGTGAATATTTTTCTAGGAGTTTCAAGATACTTTGAAATATATATCAAGCATTCGCTCCAAAGCTGAACCTTATG GAATTTGTCGCATTGTTCCCCCGTCGTCTTGGAGACCCCCTTGTCCTCTCAAGGAACAAAGCATATGGGAGGGCTCTAAA TTCGCTACCCGTGTTCAGAGGATTGACAAACTTCAGAATCGTGGGTCGGGTAGAAAAATGCCAAAGATTCAAAGTAATAT GAAACGGAAAAGAAGAAGATGCACAAGAATGGGAGTGGATAATGGCACTAAAACAGGACCTAATGAGGTATTTTGTGAAG CTGAAAGGTTTGGGTTTGAACCTGGTCCAGAATTTACGCTGGAAACATTTCAGAGATATGCAGATGATTTCAAGATCAAA TACTTCAGAAATGAAAATCTATCTCAGTTGGGTGCTAATACTACAATTTTAAATGGTAACTCGGAGCCGTCTGTCGAGAA CATTGAGGGTGAATATTGGCGGATGGTCGAGAGTCCTACTGAAGAAATTGAGGTCAGTTTATGTATAATCTCATTACGTT GCTAATTCATGAAATTATTGCCTATTCATTGCCATTTGTACGCCCCCCTCATTACATTTTGTTTTGTATATACCTCTAGG TGCTTTACGGAGCTGATCTGGAAACTGGGGTTTTTGGCAGTGGTTTTCCTAGCAAGTCTACTTACGTTGGTTCTGCTTCA CATGAACAGTACATAACATCTGGCTGGAATTTAAATAACTTTGCAAGGCTACCTGGATCTCTTCTCTCTTATGAAACCAG TGATATATCTGGTGTTCTGGTGCCATGGTTGTATATAGGAATGTGTTTTTCCTCTTTTTGTTGGGTATGGACAACATATT TCCCTTGCTTTGTAGCATGCATTTCATTAATTTTTCATGCAATTCATGCTTAAAAGTTATAACCATTACAATTATACATA TCTTTGTTAGCATGCCTTGCATATATTGTTGTTTATAGGAGCCTATGCATGTCCTGGTGTGTACTCTATTTGTATGTTTT CTCCATATAGATTGTTGTTTCTTCATTTTCCCTTAAGGGTGGGAGGGGATTTTATGGTTATTTGTGAGAATTTGGTAACT CGTGTAGTTGACATCTTTTGCCCTGATTTTCTTAGTAAACAACTACATCAAAACTATTTGTTGTTTGTTGAGTCTCATTT ATTGAAGTTGTGTATGTGCACGTCCATGTGAGAGAGATTGCTTAGCTAGCATTTTCAGTTGTTAATTGTGGTTTAATTGT GGATGCAGCATGTGGAAGATCACCATTTATATTCATTGAATTACATGCATTGGGGTGCTCCAAAAATGTGGTATGGCGTC CCTGGAAAAGATGCTTGCAAACTGGAAGAGGCCATGAGAAAGCATTTACCAGAACTTTTTGAAAGCCAACCTGATTTGCT TCATAAGCTGGTAAGAGTTTTCTGCCACTGTACAAATGTTAATTGGTCCCGATGTTGCAAATGGAGATCACATGTTTGTA TCTTCCTTCATTTCCTATTCCTTACCCTCTTCTTAATCCTCTTGCTTTTATCTTCTAGATAGAGGTAACTAGCAAGATTA AAATTTATGTTGTGTTCTCACTGGCTGGGGTGAAGTTCTACCTTTTTTACCTCTCCAGTCCTCTCTTCATTTCACCTAAC TGTCCATTTTCTGTTAATGAGCATAAAAATGGCTATGTTGGATGATCATGTTTCTTTCTTGGAACATTATGAATCTAATG CTTGAATTTCTAACTTTTGCTTGCAGGTCACTCAGCTTTCTCCTTCTATTCTTAAGTCTAAAGGAGTACCAGTTTATAGA TGTGTTCAAAACCCTGGGGAATTTGTTCTGACATTTCCGCGAGCCTACCACTCTGGGTTCAATTGCGGCTTCAACTGTGC TGAGGCTGTTAATGTAGCTCCAGTTGACTGGCTACCCCATGGGCATATTGCTATAGATCTGTATCGGGAGCAAGGGCGTA AGACTTCTATATCCCATGATAAGCTGTTGCTTGGGGCTTCTAGGGATGCAGTACAAGCCCAATGGGAGCTCAATTTGCTG AAGAAAAACACTTCGTGTAATCTACAATGGAAAGGTTTTTGTGGAAAGGATGGCCTGCTGGCAAAAGCACTCAAGGTAAA TTCTGCATTTCCATATAATAAGTATAAAGGATAGTGTTTATGATTTTGTATTTAAATTCATGTTGTGAGCATATTAATGG AATTTGGTGCTAAGTGGTTTTATTTGAGCCACCATATAAGGCATATTATTTGTCTAAGCGTATGTTTGGATTAATGAAAA GGGGTGGAATGGAGTATGTTAGGACCCAATTTCAAGGTATGGGACTTGAGCCCCACATTGGAAGTATGGGATTCTAATGT GGGGTTTATAAGGCCTTGGGCTCTCCAACTACAACAGCTAGCTTTTGTGGTGTGGTTCTCCTAAGGTTCTTATCAGAGTA GAATTGGAAGAATTTATACTTCAGTTCAGGATTTGATGGCAAAATGTTAATTCCATGCCGTCAAGCAATAGGAGGATATT GTTCAGAACTTCAGATACTATATTCATTTCTTTTTTTTTTTTGTATGGCCTCTTGATTTTTTTATTATATCTGAACTGAT TTATGGTGTCATTTCTCTTTCCAATTTCACTATGTCCATTTGGAAATCATTCAATGTTGGTTGGCATGCTTTTACTGCAG GTAATTTAGAGGCCACAACCTGTGTTTGTCATCCAACCTTATTATGTTTCACTTGTTTTCCGTTGAGTGTCACAAATCCC CAACTTTTAGCAAAGGGTTCCTTTTGTTTACTGGCTGACACCTAACTTCAATACAATAACAAGTAAAGCCTTTTGGTGGA AGAACATATTTCAACTCACTAATATTTTAACTAAGTTATGGAAATTTTTTTCAATTTGCTGATTATTTGAGGATTTTGTT TTAATATCAAACTTCATACGGAATAACAAACACTATCTGTCAATTTCAACTTCAAAGTAATTGAATTGATCCTTCTGATT TATAAGTGGCCCTCCACCTAACCCTGCGAAGAAAGTAATAGAAGGTTAAAACTTCAAATATTAATCAAAATTAAATGCTG AATGACGTTTTGTCGCTTATGCTTTGTGAATCCAACTTCTATGAAGATACACTGCTGGTGCCCTTTTATTGAATTTTAAT GTCAGTAATCTCTCCCTAATTGTCTTATCTTTTCTTTCCTAGACACGTGTTGGGGTGGAAAAAGTAAAAAGGGAATTTCT CTGCGGTTCTTCGCGAGCATTAAAAATGGAGAGTAGTTTTGATGCTATAAGTGAAAGGGAATGCAGCATTTGCTTTTTTG ATTTACACCTATCTGCAGCTGGTTGTCGCTGTTCCCCTGATAGATATGCTTGCTTGGATCATGCAAAGCATTTATGTTCT TGCTCTTTGGATTCTAAATTTTTCCTCTTCCGCTATGATATTAGTGAGCTAAATATTCTTGTTGAAGCATTGGAAGGAAA GTTAAGTGCAGTGTACAGATGGGCAAAATTAGATCTTGGGCTGGCACTAACTTCTTATGTCTCAGCAGACAAGGAAACAA TACTTAAGGAATGGAGATTTCATTCATCCAACTCATCTTCCAGGGCCAGTGCGAATAAAGAGGTGACTTTGGATCCATCA AAGAAATTTACTAAAGATTCTCAATTGATAATTGTTCCAATAAAGGATAAAGCAAATTCAGCAAATAGCAAGGATCGGAG CTATCTTCAACAAAGGAAACCAGTAGTACTTGCCTTGTCTCCTTATAGTCACATGAAAGAAAAGTTAACTTTCAATAGCT CAAAACCTGCATGTGAGATGGATAATAGTGAGATCTGTGTTAATAAAGGAGAGTCTGTGAGTTGCGGATCCAATCCAACT ACTGTTTGTGAATTGTCTCAAGAGGATTCATCATATGCTTTATCTCTGTCTCAAGCTCAACATGGAGGTGAGAAAAGTTC ACTTTACAAACGTAACAGTATTATACTTAGTGATGACAAAGATGTTGAAATGAAGATGCTGGATTCAGATAGAAGGAAGG AACTTCCTCATATGCTTGCAGGTTCTAGAAATAAAGCCAGTCCATGTAACAATGAAGATACAAACTTGACCCTCGCAGTG ACAGATGTAGTCAGGAGTGAAAAGGACACTATTACATTGCCCTGTGAAGATATGAGTTCAGGTTCAACTCAGCTTTTGCA TGTGAAACAAGAATCTCTTGAACGGAGAGAAGGGCCAGGTCCAGCTTCTACGCCAGTAGATCTTTCTTTTCATATAGGCC TTACTAGTGCAGAATCAGTTAGAAATATTCCAGCTTCTTCAACAGCAGGGGGTAGCAATCATTGTTTGGAAAGTTTGGAT ATTTGTCCTAACAGACAACATTCTGGCACTGCCAAGGTGAAGAATGAGGATAATGAAGAAAAGTTTGGAGGATGTGCCAC TTCTAATGTAGCAGATAATGCAAGAGCTGTTAATGAAAATGTCTCTTGCAGTGTAAACAACCACCGTCAGAAAGGTCCTC GTATTGCAAAGGTTGTACGGCGTATCAACTGCAATGTCGAACCTTTGGAGTTTGGAGTTGTGCTTTCTGGAAAGTCTTGG TGCAGCAGTAAGGCTATATTTCCAAAAGGTATCTATACTTATATATAATCAATTGCAGCTTGTATGTCAATTTTTAATTG GATATGTAGACTGCGTATTTATATAAATTAAATTTATTTCTGCAGGGTTTAGAAGCCGTGTTAGATACATAAATATCGTA GATCCATCGAGTATGTGTTACTATATTTCAGAAATTCTTGATGCTGGACGTGGTTGGCCTCTATTTATGGTACTTTCACC TTTTTAATTTTAACTGCAGGCTTTTGTCGTGCATTTGGTCTTACAATGTGTGCTTTTTGTATTTCTTGAAAAGGCCTTTC ATTTTTCTGTTGTAAAGTTGTTGATGCGCTGTGAATTTAAATTTCCTTTGTTGCTAATATCTTGCTGAGTTTTACCCCTT ATTATGTGGGCAAAAAAGTAGGATTGAAGATTCTTGGCTCATCTACTTTTCACTTCATGACTGTACTGTAGGTTTAAGGC AAAGTTTGTATTTTCCGAATACATTAATGTTATTGAGAATCATTGTCCTGTGAGACGGATATGGTTTTAACCGCCGGCCA TTCTAGGCAGCTAATTTAAAATTGCAGTCATGAAGAAAATGTGAAACATGCTTGTAATTGGGTGTACTTGTTTCCTGGTT TTTTTCAGATCAAAAGTGATATTTTAAAACTTTTTAGGTGTTAGCTGTATATGTTTGAGAATTACTTTGGACATTGAAAT AACTAAATCTTATTTTTCGCATCAGGTTTCCTTGGAAAGTTGTCCAAATGAGGTCTTCTTTCATGTATCAGCTATAAGAT GCTGGGAACTGGTAAGAGACAGAGTGAATCAAGAGATCACAAAGCAACATAAACTTGGAAGAAAGGGTCTTCCTCCTTTA CAGCCTCCAGGCAGCCTTGATGGTTTTGCGATGTTTGGCTTTTCTTCACCAGCAATAGTTCAGGTAATTTTGTTGATCAA AACTCATTCACAATTCAAAGTGCTTCATGTGAGTATGACATGGGCTGAAAGGAAATCCTATTCCAATTCGTGTTTCTACC CTCCTTCCATGAACAAATATATAGTATTTAAGTTTACAACTGAATTTTTTTTAGCACTTTCGTGACTAATGTAACTTTGA TTTTAAGATTAAATTATATGTTCTTTGTAGTTATTAGAATTTAGGTTAGGCCTAACTCTACCTCAAAAGCACTTAGGGGT GAGGGTTGCTCAACCCTTTATAAACACTTATTTGAAAATCCTTATACAGTTGATTCCAAAGTCAAAATTATTTGTGTGAA CCTTGTGAGTAGCTTTTGGGTGCTAGAATTAATTCTGAGAAAAGAGAAGTTGATCCAAACATACTATTAATTTTGTTTGA ATGGTTGATGAAAACAAATAAAATTAAATCATTTGGCCTTCATATTTTTTTAGCCGGGTTTTAGGGCTGTAAACTTCTTT CTGATTTTTCAACCAAGTTGTTAGCATTTGTAAAATGTCGTATTTGATTTTCTTTTCTTGGACATAGTTTTAATAGCTCT CATGATATTATTTATCCGCTTTCTCACCAGGCTATTGAGGCACTGGATCAAAGTCGAGTTTGTAACGAATATTGGGATTC CCGGCCCTACTCCCGGCCTCAAGGGCAGATTTCACAAGCTTGCCAAACCAATTCAAATGGTGGAAATGACCAAGGGCTTC ACGCGCCCGTTGAAGCTGCTGCAGTGCTAAGGAGCCTGTTTAAAAAGGCCAATGCAGAAGAATTGAATTCTTTGTACAGC ATTCTTACTGACAATAAGCTAGCCGCTGACCGGACCCTAATTGCACAACTTCTCAATGAAGAGATTCACAAATCCCGACA GCCCTAGGTGATTGATTATTTGGATGAAATTGTTCATACCCCTAACCTTTTCTTTACATGTAAATTGTAGTTTCTCAGAG GTTGCACATGCAATTTCATGCAACCTTAATCTTTGGGGTTTTCACCTGAATGGAGGTTATAGAGAAAGGAGAAAAATAAA ATAAATATAGAAAGAAGGGAAAAGAAAACCTACTTCCCTTCAAAATTTTTGCTTATTTTAAGACTTAAATTTAGAGGGAG CGGGGATAGAAAGTTATCAAGTGTCACTTAGGCCCTCGTTTGAAACTCTGAGAGGATTCCAGCCCTTATAAATTGATTTC GGTTAATACTTTGTACACAGTGTTTGAAACAGCAATTAGGTGAGTGTTTAGATTTGATTAATTGCTTTAGGAAATAGCTC TTTACTCAAATGAAGCTGTTTTCTTTACATGTTTGGGCTAAAGTATAAAAAATTGTTGATTATTTTTTCAATATCATGCC CACTTTTTTTTCTACACATTTTGATTATTGCCCATCAATCAAATAATTTTACTTTTTCATTGCTGTAAGCATGGGGGGGT TTTTTTTTTGATAGGCTGCTGTAATTATGGGTATGGAGAGATAGATCTTCATTATAACTAGGGTAATGAGTGCTTGGTTA CACGTTTGTCAGCCTCATAATCAATTCACTAGAACCATTTTTAGGTGGTTACATAAATGTTTGATAATTGATTTAGAAAT TGTAGTTTAGTTTCAAAGTCAAAGTTTGCCGAGAAACTAAAGAGTAGCTTTTGCGGTAGACACAATTATGTAAATTTCAT ATATGGGTTTCACAATATACACAATAAGAATCACTTTTTCTATGTTGTATTTTAGTACAATCACTTAAGTTTCAACTCAC TCCGCTATATTATGATAATCACATTTACAAAAATCAAACATGATGACGGAATCAC
CDS sequence (LotjaGi5g1v0201800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGTTAAAGTTAATGATGGGGACTGAGCTTATGAGAATAAGTGTAAAAGATGATAATGATGACTATCCATCAGTCCC ACCAGGTTTTGAATCATATACATCTTTCTCACTGAAGAGAGTAGAAGGCAATGAGAAACAAGATGATAAGAATATGACCA GTTGTTCAGCCTCTACAAGTGCTTCTGAACCTCAGTCAACTCAGGTGGAAAATGATGGTCAAGTTGGTGGTACTAAAAAG ATTTCCAGATCCCTTCGACGAAGACCTTGGATTAACCATGGACATTATGAGAACAATTCAGAGGAAGACTCTGATTGTGA GCGGCTTGATCAAAGTTTATCCTCAAGACCTTGTCTTCCTAAGGGAGTTATCCGTGGATGTCCAGATTGCAGTAATTGCC AAAAGGTTGTTGCCGGATGGCGACCAGAAGATCCTCATAGGCCAAATCTCGATGATGCTCCTGTTTTCTATCCCACTGAA GAGGAGTTTCAAGATACTTTGAAATATATATCAAGCATTCGCTCCAAAGCTGAACCTTATGGAATTTGTCGCATTGTTCC CCCGTCGTCTTGGAGACCCCCTTGTCCTCTCAAGGAACAAAGCATATGGGAGGGCTCTAAATTCGCTACCCGTGTTCAGA GGATTGACAAACTTCAGAATCGTGGGTCGGGTAGAAAAATGCCAAAGATTCAAAGTAATATGAAACGGAAAAGAAGAAGA TGCACAAGAATGGGAGTGGATAATGGCACTAAAACAGGACCTAATGAGGTATTTTGTGAAGCTGAAAGGTTTGGGTTTGA ACCTGGTCCAGAATTTACGCTGGAAACATTTCAGAGATATGCAGATGATTTCAAGATCAAATACTTCAGAAATGAAAATC TATCTCAGTTGGGTGCTAATACTACAATTTTAAATGGTAACTCGGAGCCGTCTGTCGAGAACATTGAGGGTGAATATTGG CGGATGGTCGAGAGTCCTACTGAAGAAATTGAGGTGCTTTACGGAGCTGATCTGGAAACTGGGGTTTTTGGCAGTGGTTT TCCTAGCAAGTCTACTTACGTTGGTTCTGCTTCACATGAACAGTACATAACATCTGGCTGGAATTTAAATAACTTTGCAA GGCTACCTGGATCTCTTCTCTCTTATGAAACCAGTGATATATCTGGTGTTCTGGTGCCATGGTTGTATATAGGAATGTGT TTTTCCTCTTTTTGTTGGCATGTGGAAGATCACCATTTATATTCATTGAATTACATGCATTGGGGTGCTCCAAAAATGTG GTATGGCGTCCCTGGAAAAGATGCTTGCAAACTGGAAGAGGCCATGAGAAAGCATTTACCAGAACTTTTTGAAAGCCAAC CTGATTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCTATTCTTAAGTCTAAAGGAGTACCAGTTTATAGATGTGTT CAAAACCCTGGGGAATTTGTTCTGACATTTCCGCGAGCCTACCACTCTGGGTTCAATTGCGGCTTCAACTGTGCTGAGGC TGTTAATGTAGCTCCAGTTGACTGGCTACCCCATGGGCATATTGCTATAGATCTGTATCGGGAGCAAGGGCGTAAGACTT CTATATCCCATGATAAGCTGTTGCTTGGGGCTTCTAGGGATGCAGTACAAGCCCAATGGGAGCTCAATTTGCTGAAGAAA AACACTTCGTGTAATCTACAATGGAAAGGTTTTTGTGGAAAGGATGGCCTGCTGGCAAAAGCACTCAAGACACGTGTTGG GGTGGAAAAAGTAAAAAGGGAATTTCTCTGCGGTTCTTCGCGAGCATTAAAAATGGAGAGTAGTTTTGATGCTATAAGTG AAAGGGAATGCAGCATTTGCTTTTTTGATTTACACCTATCTGCAGCTGGTTGTCGCTGTTCCCCTGATAGATATGCTTGC TTGGATCATGCAAAGCATTTATGTTCTTGCTCTTTGGATTCTAAATTTTTCCTCTTCCGCTATGATATTAGTGAGCTAAA TATTCTTGTTGAAGCATTGGAAGGAAAGTTAAGTGCAGTGTACAGATGGGCAAAATTAGATCTTGGGCTGGCACTAACTT CTTATGTCTCAGCAGACAAGGAAACAATACTTAAGGAATGGAGATTTCATTCATCCAACTCATCTTCCAGGGCCAGTGCG AATAAAGAGGTGACTTTGGATCCATCAAAGAAATTTACTAAAGATTCTCAATTGATAATTGTTCCAATAAAGGATAAAGC AAATTCAGCAAATAGCAAGGATCGGAGCTATCTTCAACAAAGGAAACCAGTAGTACTTGCCTTGTCTCCTTATAGTCACA TGAAAGAAAAGTTAACTTTCAATAGCTCAAAACCTGCATGTGAGATGGATAATAGTGAGATCTGTGTTAATAAAGGAGAG TCTGTGAGTTGCGGATCCAATCCAACTACTGTTTGTGAATTGTCTCAAGAGGATTCATCATATGCTTTATCTCTGTCTCA AGCTCAACATGGAGGTGAGAAAAGTTCACTTTACAAACGTAACAGTATTATACTTAGTGATGACAAAGATGTTGAAATGA AGATGCTGGATTCAGATAGAAGGAAGGAACTTCCTCATATGCTTGCAGGTTCTAGAAATAAAGCCAGTCCATGTAACAAT GAAGATACAAACTTGACCCTCGCAGTGACAGATGTAGTCAGGAGTGAAAAGGACACTATTACATTGCCCTGTGAAGATAT GAGTTCAGGTTCAACTCAGCTTTTGCATGTGAAACAAGAATCTCTTGAACGGAGAGAAGGGCCAGGTCCAGCTTCTACGC CAGTAGATCTTTCTTTTCATATAGGCCTTACTAGTGCAGAATCAGTTAGAAATATTCCAGCTTCTTCAACAGCAGGGGGT AGCAATCATTGTTTGGAAAGTTTGGATATTTGTCCTAACAGACAACATTCTGGCACTGCCAAGGTGAAGAATGAGGATAA TGAAGAAAAGTTTGGAGGATGTGCCACTTCTAATGTAGCAGATAATGCAAGAGCTGTTAATGAAAATGTCTCTTGCAGTG TAAACAACCACCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTACGGCGTATCAACTGCAATGTCGAACCTTTGGAGTTT GGAGTTGTGCTTTCTGGAAAGTCTTGGTGCAGCAGTAAGGCTATATTTCCAAAAGGGTTTAGAAGCCGTGTTAGATACAT AAATATCGTAGATCCATCGAGTATGTGTTACTATATTTCAGAAATTCTTGATGCTGGACGTGGTTGGCCTCTATTTATGG TTTCCTTGGAAAGTTGTCCAAATGAGGTCTTCTTTCATGTATCAGCTATAAGATGCTGGGAACTGGTAAGAGACAGAGTG AATCAAGAGATCACAAAGCAACATAAACTTGGAAGAAAGGGTCTTCCTCCTTTACAGCCTCCAGGCAGCCTTGATGGTTT TGCGATGTTTGGCTTTTCTTCACCAGCAATAGTTCAGGCTATTGAGGCACTGGATCAAAGTCGAGTTTGTAACGAATATT GGGATTCCCGGCCCTACTCCCGGCCTCAAGGGCAGATTTCACAAGCTTGCCAAACCAATTCAAATGGTGGAAATGACCAA GGGCTTCACGCGCCCGTTGAAGCTGCTGCAGTGCTAAGGAGCCTGTTTAAAAAGGCCAATGCAGAAGAATTGAATTCTTT GTACAGCATTCTTACTGACAATAAGCTAGCCGCTGACCGGACCCTAATTGCACAACTTCTCAATGAAGAGATTCACAAAT CCCGACAGCCCTAG
Protein sequence (LotjaGi5g1v0201800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRLKLMMGTELMRISVKDDNDDYPSVPPGFESYTSFSLKRVEGNEKQDDKNMTSCSASTSASEPQSTQVENDGQVGGTKK ISRSLRRRPWINHGHYENNSEEDSDCERLDQSLSSRPCLPKGVIRGCPDCSNCQKVVAGWRPEDPHRPNLDDAPVFYPTE EEFQDTLKYISSIRSKAEPYGICRIVPPSSWRPPCPLKEQSIWEGSKFATRVQRIDKLQNRGSGRKMPKIQSNMKRKRRR CTRMGVDNGTKTGPNEVFCEAERFGFEPGPEFTLETFQRYADDFKIKYFRNENLSQLGANTTILNGNSEPSVENIEGEYW RMVESPTEEIEVLYGADLETGVFGSGFPSKSTYVGSASHEQYITSGWNLNNFARLPGSLLSYETSDISGVLVPWLYIGMC FSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPELFESQPDLLHKLVTQLSPSILKSKGVPVYRCV QNPGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIDLYREQGRKTSISHDKLLLGASRDAVQAQWELNLLKK NTSCNLQWKGFCGKDGLLAKALKTRVGVEKVKREFLCGSSRALKMESSFDAISERECSICFFDLHLSAAGCRCSPDRYAC LDHAKHLCSCSLDSKFFLFRYDISELNILVEALEGKLSAVYRWAKLDLGLALTSYVSADKETILKEWRFHSSNSSSRASA NKEVTLDPSKKFTKDSQLIIVPIKDKANSANSKDRSYLQQRKPVVLALSPYSHMKEKLTFNSSKPACEMDNSEICVNKGE SVSCGSNPTTVCELSQEDSSYALSLSQAQHGGEKSSLYKRNSIILSDDKDVEMKMLDSDRRKELPHMLAGSRNKASPCNN EDTNLTLAVTDVVRSEKDTITLPCEDMSSGSTQLLHVKQESLERREGPGPASTPVDLSFHIGLTSAESVRNIPASSTAGG SNHCLESLDICPNRQHSGTAKVKNEDNEEKFGGCATSNVADNARAVNENVSCSVNNHRQKGPRIAKVVRRINCNVEPLEF GVVLSGKSWCSSKAIFPKGFRSRVRYINIVDPSSMCYYISEILDAGRGWPLFMVSLESCPNEVFFHVSAIRCWELVRDRV NQEITKQHKLGRKGLPPLQPPGSLDGFAMFGFSSPAIVQAIEALDQSRVCNEYWDSRPYSRPQGQISQACQTNSNGGNDQ GLHAPVEAAAVLRSLFKKANAEELNSLYSILTDNKLAADRTLIAQLLNEEIHKSRQP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 40 | 86 | 47 | - | – | |
| MobiDBLite | 50 | 78 | 29 | - | – | |
| PANTHER | 69 | 1240 | 1172 | 0.0 | – | |
| PANTHER | 69 | 1240 | 1172 | 0.0 | – | |
| SMART | 152 | 193 | 42 | 1.7E-22 | ||
| ProSiteProfiles | 153 | 194 | 42 | 18.054 | ||
| Pfam | 154 | 187 | 34 | 2.4E-17 | ||
| MobiDBLite | 220 | 247 | 28 | - | – | |
| SUPERFAMILY | 353 | 554 | 202 | 1.9E-41 | – | |
| ProSiteProfiles | 364 | 527 | 164 | 40.935 | ||
| SMART | 364 | 527 | 164 | 5.9E-70 | ||
| Pfam | 394 | 510 | 117 | 2.2E-46 | ||
| Pfam | 617 | 667 | 51 | 4.1E-13 | ||
| ProSiteProfiles | 1027 | 1085 | 59 | 23.845 | ||
| Gene3D | 1035 | 1171 | 137 | 1.5E-17 | – | |
| Pfam | 1040 | 1082 | 43 | 1.8E-8 | ||
| SMART | 1041 | 1085 | 45 | 1.8E-14 | ||
| ProSiteProfiles | 1087 | 1177 | 91 | 24.714 | ||
| Pfam | 1090 | 1173 | 84 | 8.8E-20 | ||
| SMART | 1091 | 1185 | 95 | 5.5E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi5g1v0201800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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