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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0219300 |
| Transcript ID | LotjaGi5g1v0219300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA ligase-like protein; TAIR: AT3G05210.1 nucleotide repair protein; Swiss-Prot: sp|Q9MA98|ERCC1_ARATH DNA excision repair protein ERCC-1; TrEMBL-Plants: tr|K7LJM3|K7LJM3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0219300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52560915..52570532) extracted from Lotus japonicus Gifu genome v1.2.
TGGGCTCATGAAGGTCCAAACAAGCCCATTTCTCAATTGTATCGCAATTCGCAAGAAATCAACACTGCAACAAAGTGGTT CGTTCGCGCGAATTGAAGGTGCAGAAGGAGATGGAGGAAGAAGAGCAAAACAACGATACGAACACGAAGAAGAAGAGTAG CTCCGTCGTGATAAGAATCCCTTCGTATCAAGAAGTGGTTGAAAGTTCTCAGGCGAGATCAACGCCACCGTCGCTGTTCG TTCCCTCCCAAACCTTCTCTCAAGCCTTCGCGTTCATCAAATCCTCCGAGTTCTACTCTGCTCCTACTCCTCCTCCTTCT TCTTCACTCCCAAGGTTCCATTGCTGCTTCTAATTTCAATTCAATTTACTTCAATCGTAGTCATTATTAATTAATTTTGA TTTTGATTAGGGAAACCAGTCAACCAAACCCTCCATCTTCGTCTTCATCTTCAGCATCAACGACATCATCATCTGCTACT ACTACTACTACTCAGTCCGGTCAAACTCGCAATGCAATTCTTGTCAGCCACAGACAGGTGAGTGAGGGGAATTTTAAATT TGTGAAGGTTTTGATGATGATGATGATGTTATTGTTGTTTGATTTTGTGTTTTTCAGAAGGGAAACCCATTGCTCAAACA TATTAGGAATGTTAAATGGACATTTGCTGATGTTGTTTGTGATTACTTGCTTGGTCAAAGCTCATGTGCTATCTATATCA GGTTATTTGAATTTTCTGTTCTTTTTTTGTTGTTGGTTGAATTTGTTTGTTTTGCTGCTTGTAGTATTGTGGGTTTTTAT TGTTGTTGCAATAGTTAATGTTAAGACTAATAAACACTTGAAAAGAGGAGTGCTGTTACTTGCTAGGTTCTTCTGATAGA TAACTTGTCGAAACGAAATGCTTTTAATTATTTATGCGAGTTGCGTTAGTTAAATGTGCTTGGCAAAAATATATGACCAC GTGAGTTTTCGTATCGAATTGCCTAAAAACTGTGGATTTTGTGGTGATTTCTCTGCCAGTATCACGGGATGGGGTATATA TGTGTCGAACAATTATTTGTAATCTGTCATAGTTCGGAAAAAAAAAATCATACCACGTGGGCACTACTAAGTGAATCAAC TGTTTACATCGGACATTCTTGTTTATTATCATGCTTACAGAACTTATTGTTTTCTAAATTGTCTCCTGTGTGTGATTAGT TGGATACCAATTACCAAGAAGTTGTTATTTTTCCGCTAGATGGGTTTGTTATAGTTATATTTATGCATCAACTTGACTTA AGTGGATGGTTTGATGCAGTCTTCGGTATCATCTGCTGCATCCTGACTACTTGTATTATAGAATAAGGGAGTTGCAGAAG AATTTCAAGCTTCGTGTAGTTTTATGCCATGTTGATGTGGTCAGGCAATCTGTTATACTTATTCAAACCTCTGTAGCATC TACTTTAGTTTGTTTTCCAATGATATAATATAATTATAGCTATTGCTATTCTATTATTGACATGAAGTATGTGACATTTT CTTTGTTTTTTTACTATTGATTGCAGGAGGATGTAGTGAAGCCTCTACTTGAAGTTACAAAAACAGCTTTGCTTCATGAC TGTACCCTTTTATGTGGATGGAGGTGCAATTGGCTCTCCTTTTAACTGTTTTTGAAGTGTGCATACTGAATATATCATTT CTTTATTCACTCTTATGAGCCTGAGACTGAGAGTGCTGCTATCTACCATATTCTGATGAACTTTATAATAAATTCCAATT ATAAAATATCAAAATATCATATACAGCTACCAAAGCTTTCATTAAGGATGGGAGTTTGTCGTTGCAACTTGATGGATATG GTTAACATGACTAGCTATTTCTTAGCGTTTTCCCCTTTTTTTTAGGTGACTCAGTTATAGAATATACATTGTGAGATGAG AACAACCTATTATAGTTTCTTGGGGAACATTTAAATTAGCAAAATTTCTACCATTTAAAGGTGCTTGGGGCTACTGTAGC ATGCATGTGAATTTGATAGTATCCTTAATGAGTTAGTAGTTTAGTTAGTTGAGTGTTTTAGTTAGTTTGAAAGAGTTAGT TAGAGTGAGAGAGAGAATGTTATAAATAGGAGAGTTAGAGAGAAATATCATCTCCGGGGATCATTTGTAATTGGGAACTT GGGAGAGAGCTGAACACTTGACCATTCAGGAGTTTTGGCCGATTTTCTTCAATAAACTGTTCTCCTTTCTTCTTTAGTGC TGGTACCTATCATAATTTAAGTATCTGCAGCAGGATCTGGCAAGATTCCTCTTACCTGTGTAATTGATTTTCTTACTGTT CCATTCTGCCATTGTTTTAGCCTAGAGGAATGTGGCCGTTATTTGGAGACCATAAAAGTCTATGAAAACAAGCCTGCAGA CATTATTCAAGGGCAAATGGATACAGACTATCTATCACGTGTATGCTTATGTTTTTTATTATCTTTTTTATATATACAAT AACATTATCATGGGTTTTAGTACTTTCAAAATCAAAAGATTAAATACACATTACACAGTCTAATGTTGATAAAGTTCTAA GCATGGTCATCAAACGCACTGAAGCTAGTCTTACTTTTAACTGCAGCTGACACATGCCCTTACGACGGTTCGGCATGTTA ACAAGACTGATGTAGTCACCCTCGGTACCACATTTGGGGTATGTATTCTGTGTTTTAGCACACACATAGACACGTATATG TTGATTGATTTTGTTTGCAAAAGCATTTACCAAGCTGGAACCTTGTCTTTTCAGTCTCTATCTCACATTATGGGTGCATC TATGGAAGATCTTGCTCGCTGCCCTGGCATAGGAGAGCGCAAGGTATATTAACATTGGTAAAAGTGGGATAGGACAATGA TTTATACTTTTTATGTTTGGGGGGGCTGTGGTTGCCTGATTTGGTACCAGAGCCCAAATGATTCGAACCAAAAAACTTAT ACTTCCTGATAACAGGTCAAGCGCTTGTTTGACACTTTCCATGAACCCTTCAAGCGTGTGGAGTCCAGCCGGCAAGCCGT TCCAGAGACTTCTGCCCAGAATAAGCCAGCTAGTCCTGATCCATTAATGAGAAACAATGCTGAATCTTCTTCCTTGATTA AAGACAAGGACGTAGAAGATGTTAGCAAACGTAGGAAGGAAGAGCCTGAACTGACTGTCAAATCTGCCCTTTCTGCAGCA TTTGCTAAATATTCTGACAGAGTTGGAAAGAACACTTCCGAAGTAGAAGAGAAAGAAGAAGAATCATTAGTTGTCAAGGA TTCAGAAGATGAATCATAAAATTACCATTAAGTTTTACAAGATAGTTTAGTTTTTTTTTTTCTTGAGCGAGATAATCTAG CGAGATTTAGAAGCTTAATTTAAAATCTCCATGCATTACTGGCATGTTACTCTGCTAGGAGTGCAAATGTGTCATGAGGG AAACAGCTCAGCTGCTGAAGAGGTTGTAATATGACATCTGGACTGCTAGGAGAAGCTTTAACCGAATGAGAAGGCAAGGA AGAGAAGAGGGGTCATAGAGTATGGATAGGAATAGAGGGAATATAGGATTAAGCGTTCAGTTGTTGAGAATAGTTGGGAG GGAGGGTTTGGACTTTGGACTCGAAATTCCCAGATTGAGAGAGATTCTCATCTTACATTCTGTCTACCTCGTCTATTCAT AGTTTTGGCCCTTTGTTACTCTGATTAAACAAATTCATTTATCTTGATTCGGAGGGATGTTTGCAATGATTTTTACCATG GAAATATCCATTGACATGATCTGCAGGGATTCCTGTTGTACATCATGCTTTATGGGGAATCCCTCGCATTCAGCCAGTAA TATAGTAAGTCCAAATATATCAGCATTACTCCCCTAAATTCGTCCCTATCTGTATGTTAGTATTTCTCTTTATAGAAAAA AGTGAAGTAGCTTTCAATATAGTTGTCCAATTGCACATTATGCGTTAATGCCCCTAAAGCCGAGCTCTTTGCCAATTGCC AGATAGAAGAAGCTGGACTCAATCAACCTCTTACTGGTAAGTGGAAGCTTCGTTACAGTTGGCTAAAAATGATTCTGTCT GATTTAAAGAATGTGCTGAGTTTGTTTTCATGCGGTGAGTTGGATTATTCAAGAATTTGACTGGAAATGAAACTCTCAAA ATGTTTGATCTTTATTTGATCATATTACAGAAGAAATCTAATTTTGTGAAAGTTCATGTTCTTCTCAATTTTGTACCATG TGTCTCAGTAAGCTTACCATAAAAAAGCTAATTTAAAAAAAGGGTGTTAATATTGCATATGGATATTAAAATGAAAAAAA TAAAAAAAGAGCATCTAGAACTATGTGTCCCGTGACTCAATGCAAATGATTATAATTTTGGGCCCTAGACAAATTTGGAT TGCTTCTGGCATTGATCTAAGTTGCCAACTTGATATTGCATTTTCCCCCATCCTATGTTTGTCCAAACACTGTTTCAGTC TAAGAAGGAAATGCAGTTATTTCTAGGCTGCATATTGCCTTTTCAAACAGAAACATGATGCACGCCTAAAGACTTGGTCT TGGTATTTGTTTATGAAACCTCAGGGAACTGGTTGAACTAAGAGAAGATGGGTTCCTGACAAGTGGTACCAATGATTGTA CAACATCTGTCATGAGAGGCCTGTAATCAGCTTCTGGCTGTATGCACATTGCTGCAATGGCAGCTACCTATAAATCCCAA AACAAAGAGAAATCAAATGATTATGTAATGGGGAATATATAATTAATCCAAATCATCAAGTAATAATGATGAGAATAAGA GAAAAACAGTGACTCAAAGAAGCCATGTTACCTGAATTAATTCCTTATTTGAGTACTGTCCTCGTAGAGCTGGATCAACC ATTTCAACCACCTTATCTCTGCTTGTCAACCTTGGAAGAGCCTGATGATGAGTAACAAAGATGATATGTTACAAGACATG ACAGTATCAAAAACTCAGTTCCCTGATTCATAATCAGAGACAGTGTTTGCTATACAACTTAGCAGTTAGCACCCTTATTG ATATTCTGGAACATTAGCAATTTTTACTACTTTGATCTCAAACAAAAACTATTTTGTAAAACAATTGCAGAGTGCTATTC GGTGCAAGTTTGGAAATCCTTCTACAATTAATTATAAAGATATAATCAATTGTCGTGAGAAGCTTCTTTGAGTAACTCCT GAATTTCATAATCGATTTATAGAAAAGAAAAGTTTATCAAAATATGCTATTACTAACCCATGAAACAAGGACATGTTCTC CAGGGGGCCGCTTAATGTCAACTGGTACACGTCCGGTTAGCAGTTCAAGAAGAACCACACCATAGCTGTAAACATCTGAC TTTGTAGTAAGCTTACCCGTGGATGCGTACCTACATTGTGCCCAAATTAAAGGTACAAATTAAAGTTATGCAATATTTTG TGACCATCAATTATATGTGAATGGTGGGATCAATATGTTTTAATCTCTCTTCTCATATACATTGAATAGGTATATTCTTA AGATAAACACAAAATTTCATGTCATTAGAGAAAGGTCCTATATTAACTAGAGATGCAACCAATATTGTTCTTTATAGATT GTATAGAGCAATTGTCACATATGAGTAAGCTTGAGTTAAGTCTAACTCGAATTTTAAGATATTTTGATTTATGAAAGGTA TACTGTATATGCAATATGGAATCTTAGTGTTATAAAAAAGCCCTATTGTTTTAAAAAACTACAGCCTGGTTAATAGGGAC TTGAGTGTGACTATGTCATATTTCGTTTCTTTAACATTGCAAGTTTTGTCCTGGGAGTGGGTCAAAGATAAGGCAAGGTG CTTCCAAATGCAAAAGATAAAATAATAGGTTACTCAATCTCATCAAATTACTCACTCTGGTGCCAAATATCCAGTGGTCC CCAACACACGGGTAGAAACCTGACCGTTCCTCTTCTCTGACCCCATCTTAGCCAATCCAAAATCTGACACCTTGGCACGG AAATTTTGATCCAGTAGAACGTTGCTACTCTTGAAGTCTCTGTGGATCACAGGTGACACCGCATGCTCATGCAGGAACTC CAAGGCCCTGGCACAATCAAGGGCTATCCTCATCCGGGCCCACCAATCCAACGGCTGAGATTGATCACTAGGGGAGTGAA GATGGTGTTGGAGTGTCCCATTGGGCATGTATTGAAAAATCAGTAATCTGTGGTGTTGGTCAGCACAATAGCCAAGTAGC TCCACCAAATAAGGAGAGTGCAGCCGGCTCAAGAGATCAACCTGTAGCCGTAAATAAATGTCAGTTTAGTCTTCGTCACC ATGTGCTTCATTTGAATAAAGCTCACAATGTGAGTTGGCATGTGGGATGGACTTTCACATTCCATATTTCATGGTCCCCA ATTTGATTGCTAAACGCCAGACAACTCTTTAAATAATAAGAGTTAGCAGAAAATGTCTAACTGTATTTCAATGACCTACA AATAAGTTATAGTAAATTTGATTCAATAGTATTGTAGATTTCAGAGAGTTTGAGTCTCGATGCAACGATAAGGTTGCTGC CGTGTGATTTGAGTCATGGAATCAGCTTTTTACATAAATATAAGATAAAACTATCAACATTAGATTCAAAAACTGCATTC GGCCCCTTCTCACGCAACATTGCTCTTTTTAGTATTGTAGATTTCAAATGATTCCATAACTAAAACTAGGGCAGTAGTCA GAGAGTGTATTATGGTTGCCAATTTGATAGGATGTTAGTCATCTCTCATGTTAAAATAAAATAAACTGTTGTCATGACTT TCTTTAATTATCTCAATTTTCTTTGACGACCAATAGAAGTTTCAGCTTAGTAAAAGACAAAAACAATATCTCTGAACAAG GAAATGAGACATTGGGAGCAAGTAACAACAAACAAATATGAAATCATTGAATACAAAGGAGATATGAAATCATTAAATGA AGTCCACTCACTCACCTCTATTCTGAAAGCACGCTCTCCTTGCTTACCTTCACTTCTCAACAACTTAATAGCTGCCAAAG TTCCATCACTGAGGACTCCTTTATACATCAAACCAACCCCTCCATTGCTAATCACATTTGCTTCACTGAATCCATCTGTT GCAACTTCTAACTCCCTGTATGTGAACACTTGAACTCCTCGAAATTTAGGTGCTGGGATCCTGCTCAAATTCCCCCCATG AACTTGAAGACACCCACCCTTTACATCTGCAATTCATATTTCCAACCATTTATGTATTAGCTTCTGCATCTTAAAGCATT CTTCAACCCTCATTCCTCAAAAGACTCATAATACTTAAGGACATTTAAATTTAAGCATTTTGCTAGCATGTGTCTACAAG ACAATGGTTAAGAAATTAAGAATTAAAAAGTGTTTGTTGAAAAGTGAATCATTCCATTAGTATGTTCAAATCAACTTCTT TTTCCTCAAAATCAATTCAGATGCTCAGAAGCTATGCAGAGAAGTTTCTCTCCATAATTGATTTTCGATTCAGAATCAAT TGTAAAATTATTTCCATATATAAAGTAACATTGATAGATTATGCACTTTTAATAAAAACTTTCCATTTATTGATTCCTTG AAATCGGTTAACATTTGACTTGAATTAAAACTGAAAACACTTAATGGTATGCTTGAGTCAAATTGCTGTAATCTCTGCAT AAACTGTTATATATCATAACTAGAAACTCATATCAGTTGCACATATAGTTTCTGTTAGACCAATTAACAAACAGTTGGTA TTCAATTGATAGCATATGCTACTAGTTACCTGGGCTAGCATCAAAGCTCAACATTGTTGAAACAATAAGCCTGCTGTTTG TGTCATGAAGCTCTCTACTACTGTCATCTTTGCAAGTTCCTTTCTTTACGGAAGGTTTTTGGCGGCGGATCAAGTAAAAG ACCAGAAAAATGATAAACAGGATGGTGACTGCGGCAGCCACTGCAATGGTTGTGAGAATGGTTTTGAAGGGGAAATGGCC ATGGCTATGGTTATGGTTTTCTGAATGCAAGTGGTGTCTTGCGAAAGTGTGGCTAGCAACAGTAGGTGGCTCTGAAGGTA CAGTGGTAGTTGTATTAACTTCCATGAGTGACCACAGAGCAAACCAAGAAAATAAGGAATTTAATGGTTTTCAGTTTGAG GTGGAAAGGAAGGTTGAGATGGGAAGGCATGCATAAGTAAGAGAGGGTAGGGAATGGAATAGGAGTTTTGCTTTTGGTAG TAAATAAAACAAGGATAATGATTTCAAGATATTCGCATACTGACACCGAACAGACACCAGAATGAGAGAGTAAGAGTATA GAAAGAAGTAATAGATGTGATTTACGACGAATGTGATAAGAAGATAGATAATAAAAAATTCAGTTGTTGTCTGTGGGGTA TCTGCACTGTTTGGTGTCTAAGTATCGTTATTGATAAAACAATGGGGTTGCAAATAAGTATTAGCTAGTTTTGAGTCTCC TTTCCTAGGAGGGCATTATCTCTTTCTCTGTCTCGTGAATATTTAATCAAGTGGTTTAGTTGTAGTACTTCATTTGTCTC TTCTTTTGATTTATTTTCTAAGGAATTGTCTCTTTCTGTGCATTGGAAAATTTTGGAAGCATTTGGTTTGGACCATCCCT CAATCATGCGCTCCCTCATGATTCTCTAATCTAAATAGATTGGTTTTCATGACAAAATTTCATGTGATCTTATTGTGTAA AGCTTTTGTTCTATCTCCCTTAATTAGAGGCTCTATTGAAGTGTATGAATTTGAAGAAGAGATATATAACCGCACAAATT TTCCAGGTTATCTGCATTTGTACTTGCTGAAACCATAATGGGTTTATAAATGTCTTTTTTATCATTCTTTTTCAGAAAAA GAGAACCAAAAAAATTAATTTTGCTTTTGTCTGCAGGCTGATGAGTCAATTTACATCTGCTGTTACTGAGAGGGGTCAAC CAGTTCAACCACCAGTGAGATGAAGTGTGTTTGGATCCTACTTAAGTGCAACATAGACAAATGTTCATTATAATTCATAG AAGATATTACATTCATTTTTCGTCGGAAGTAATTGCTAATATCCATTTGAACCGGTAGTGACAAATATCCAAATATAGCC AAAATAACTTGGTAACTCTTTCATCTATCTAGCAAACTGGCACTTCCACTACTACTAACCACCAGCAATAATAGTACCAT GAGGCAGAATTCAATTCTTAAATCTGCTTGCTTTCTGATCCAGGAAAAACAGTTTGTAATTTTGTATCATGTATCATTCT ATTTGGTTTATTTATTATTCCATTAGGTTCTGACTTCTGAAGGCTAGCTAAAGAAGAGACAATAGATATTGCAACAAACT AATCCAATAAAGAATCTTTAACAAGCCATTTTAACCGACCCTTTGTACTTACTCAGTTTATATTACAGCATTATTTGATT GGATTGCTCGTTTTTATTATCATGAATGAACCAGAACCGAAAATTTGAAAATTTGGAATGCATGTAATAATTGTAATGTT GCAAGCTGAAGATAATGGACAATTTTTATGCAGAACATATTCAGCTCATAGTGAGTTTCTATTGGCTATTTGGATCAGTG TCTTGATCTCATTACTTG
CDS sequence (LotjaGi5g1v0219300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAAGAAGAGCAAAACAACGATACGAACACGAAGAAGAAGAGTAGCTCCGTCGTGATAAGAATCCCTTCGTATCA AGAAGTGGTTGAAAGTTCTCAGGCGAGATCAACGCCACCGTCGCTGTTCGTTCCCTCCCAAACCTTCTCTCAAGCCTTCG CGTTCATCAAATCCTCCGAGTTCTACTCTGCTCCTACTCCTCCTCCTTCTTCTTCACTCCCAAGGGAAACCAGTCAACCA AACCCTCCATCTTCGTCTTCATCTTCAGCATCAACGACATCATCATCTGCTACTACTACTACTACTCAGTCCGGTCAAAC TCGCAATGCAATTCTTGTCAGCCACAGACAGAAGGGAAACCCATTGCTCAAACATATTAGGAATGTTAAATGGACATTTG CTGATGTTGTTTGTGATTACTTGCTTGGTCAAAGCTCATGTGCTATCTATATCAGTCTTCGGTATCATCTGCTGCATCCT GACTACTTGTATTATAGAATAAGGGAGTTGCAGAAGAATTTCAAGCTTCGTGTAGTTTTATGCCATGTTGATGTGGAGGA TGTAGTGAAGCCTCTACTTGAAGTTACAAAAACAGCTTTGCTTCATGACTGTACCCTTTTATGTGGATGGAGCCTAGAGG AATGTGGCCGTTATTTGGAGACCATAAAAGTCTATGAAAACAAGCCTGCAGACATTATTCAAGGGCAAATGGATACAGAC TATCTATCACGTCTGACACATGCCCTTACGACGGTTCGGCATGTTAACAAGACTGATGTAGTCACCCTCGGTACCACATT TGGGTCTCTATCTCACATTATGGGTGCATCTATGGAAGATCTTGCTCGCTGCCCTGGCATAGGAGAGCGCAAGGTCAAGC GCTTGTTTGACACTTTCCATGAACCCTTCAAGCGTGTGGAGTCCAGCCGGCAAGCCGTTCCAGAGACTTCTGCCCAGAAT AAGCCAGCTAGTCCTGATCCATTAATGAGAAACAATGCTGAATCTTCTTCCTTGATTAAAGACAAGGACGTAGAAGATGT TAGCAAACGTAGGAAGGAAGAGCCTGAACTGACTGTCAAATCTGCCCTTTCTGCAGCATTTGCTAAATATTCTGACAGAG TTGGAAAGAACACTTCCGAAGTAGAAGAGAAAGAAGAAGAATCATTAGTTGTCAAGGATTCAGAAGATGAATCATAA
Protein sequence (LotjaGi5g1v0219300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEEEQNNDTNTKKKSSSVVIRIPSYQEVVESSQARSTPPSLFVPSQTFSQAFAFIKSSEFYSAPTPPPSSSLPRETSQP NPPSSSSSSASTTSSSATTTTTQSGQTRNAILVSHRQKGNPLLKHIRNVKWTFADVVCDYLLGQSSCAIYISLRYHLLHP DYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTD YLSRLTHALTTVRHVNKTDVVTLGTTFGSLSHIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVESSRQAVPETSAQN KPASPDPLMRNNAESSSLIKDKDVEDVSKRRKEEPELTVKSALSAAFAKYSDRVGKNTSEVEEKEEESLVVKDSEDES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 19 | 313 | 295 | 1.7E-125 | ||
| MobiDBLite | 63 | 108 | 46 | - | – | |
| MobiDBLite | 77 | 108 | 32 | - | – | |
| TIGRFAM | 109 | 220 | 112 | 1.5E-41 | ||
| Gene3D | 109 | 223 | 115 | 4.9E-45 | – | |
| SUPERFAMILY | 109 | 235 | 127 | 1.5E-48 | ||
| Pfam | 111 | 223 | 113 | 8.9E-43 | ||
| Gene3D | 224 | 314 | 91 | 4.8E-34 | – | |
| SUPERFAMILY | 232 | 303 | 72 | 9.21E-17 | ||
| MobiDBLite | 306 | 358 | 53 | - | – | |
| MobiDBLite | 310 | 335 | 26 | - | – | |
| MobiDBLite | 336 | 358 | 23 | - | – | |
| MobiDBLite | 372 | 398 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Damaged DNA binding | Interacting selectively and non-covalently with damaged DNA. | ||
| Molecular function | Endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
Expression pattern of LotjaGi5g1v0219300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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