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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0256800 |
| Transcript ID | LotjaGi5g1v0256800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | U-box domain-containing protein; TAIR: AT3G06880.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1; TrEMBL-Plants: tr|K7LKD4|K7LKD4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0256800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56546288..56553722) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAGGAAACTTCAGATTCATGATGGATCAGAAGGATATTGTTAGATTCTTGACTACAACTGTTGATAGTTTCATTCA AGATCGATTAATCAACAAAGAGCAAAGAACCCAACACAAAGAACAGTGTGCAGAGAGGTTAGCAGCAGAAGATGGAAGTG GTGACAAAGACACTGAGGTGGAATACTCTGATCAAGCAGTATTAGCAAATCTTGATTGGGGTATTGAAGCCCTTGAGGAA GCCATCAATACCTATAACATGGAAACCAAGCTTGCAAGGCTAGATTATGCTGAGAAGATGTTGCAAGTGTGTGCAATGTT GAACCCTAAGCAAAAGATTGCTGGAGTTCCAAACTCCTACCTCTCAGCTTGGGCACACCTAAACCTATCCTATTTATGGA AGCTGAGGAATAATGTTCAGAATTGTATTTCTCATGCTCTTGAGATGTTCATCGTTGATCCCTTTTTCACTCGGATTGAT TTCGCTCCAGAACTCTGGAAAAGCCTGTTTCTTCCACACATGAGCTCAATTGTGGGGTGGTATTCAGAGGAGAGGCACAG GCTTATGATGGAGGTGATACCTGACTCTGCTGATTTGTCCTTCACAGCTGATTTTGAGCAATTTTTCAATGAGTCTTTGG TGCTTACTATGAGGCCACATCAATTGGAAAAGTTGCAAAAGCTGGAGCAGCTTTATGGAGAGTCCTTGGATGAAAACACA AAACTATATGCAAAATACTATAACGATTGCATGAACTCTGATTCCTCTTCAAGTAAGAAGGCGGTTCCTATGTTGCCAAT TGCTGAGCCCCCAATGACTCCTTTGCATGAGTTGAGCCGGACTATTCCAGATTTTGTTAAATTTGGTCCTATTTTACCTA AGAGTGCTGGTTTTTCTCTGGCACCAAGATCTAAAGATGTCTTAAATGAAACAATCAGGTTAGAATTCATACACAATGGT TTTATATCATATTTCTAACACACGGGTTGCCGTGCCTGTTACTGTTTTGCATGTGCTTGTGTGTGTTTCAATATTCACTA TCAAAATGTTCGTTATATTGGTCATCTACATAGCTCAAGAAAGTTCAGCATGTAATCTTTTTCCATTCATTTGAGCCTCC TAATACCCTTATGTACTTTTTGGCTGCTGAATTTCAACAGAGAGAATGTAACTTCCAGCAACTTGAAGGAGGAAAAATTA TCCATATGGGGTGCTAAGGTGAAAGAAAGTTATTTATATGCTTGTTGCTAATAATATAGCTTTTGATAAATGGAATTAGA AGAGCATGTGTGTATAGGCCTTATGAATAATTATCATATGCAGGATACCATCATTGAAGAGAATGAAGATGATTCAGATT CTGAGCTTGAGAATGAATCTGTGGATTCTGATGACAAAAACAATATTTTCTCACCTGGAATGAAGATGATGAAGTATGAG GGTGTTGAAACAAAAGTTGATCTATCATGCCAGAGGAATCAAATACCTTCTCCTGATATCTTCTCTCCCTTGGATTCTCC AAGAACTGCTCCAAATAATTCATCTCCAAACCCTGATATGCATAGTAAAAGAGATTCCAAGTTTTTGCGCTTATCATCTA GCCGCATCAGGGAACCAACTATTTCTGACTCCTTAACATCATCTCCAGACATTAGCATTGATAACATTTCAAATGCTGAT AACGAAGTGATGGTGAGTCAGATACGATCCATATAAGCTCATTAGTTACTATTACTTGTATCTTTTTTAATTGTTGCGAG GTGTAATTACTATTTTTTTTAAGTTCAACAATGTAATAGTTCTTTGGAATATAGGTCTTGAAGAATATTCAGAGGAAAAA TGATAACCAAACACTGAGTATGAATCATGAGAATGAGAACAGCCTGATACTAAATGGCAGGTAATCACCACTTTTTATAT ATGGTATATTCTAGGATGCGCCTAGAGGTTTTTTATGCTAATCTTTGTGCTTGTGACAAGTAAGAAAAAAATCTTTGCAT TTGGGTTTGCAGTTCCCTTTGTGAAAGTGATGATGGATATCAAAGCTTCAATTCATTGCCAAAATTAGAGAAGCTGAGTA TGGGATCAAAACCACCCAAAGATTTTGTTTGCCCAATTACAGGTCAGATATTCTGTGATCCTGTCACCCTTGAAACTGGC CAAACCTATGAGAGAAAAGCAATTCAAGAGTGGCTCAGAACAGGAAACACAACATGCCCCATCACGCGACAGCCTCTATC TGCAAGCATATTACCCAAAACAAACTATGTTTTGAAGAGATTGATTACATCTTGGAAAGAACAGAATCCTGAACTAGCTC AAGAGTTCTCAAATGTTAACACACCAAGGGGTTCTTCCTGTTCTCCATCAGCAAAAGACATCCCAATGCTCTCAACTAGG CAAAGAACAACTGATTCACCAAATCATAAGAACAAAGATTATGCTAGACAAAGGAGCAATAGATTTATGCCAGCTGCTAT CACAACGTCTCCGACAAGTGTGCTATCTCAAGCTGCAGTTGAAACAATTGTGAATTCCTTGAAACCTTACATTTCAAGTC TATGCACATCAGAGAACTTGCCAGAATGTGAAGAAGCTGTATTGAAAATAGCAAGATTGTTAAAGGACTCAAAGACTAAT CCTCAGATTCATTCTTATTTATCAAAGCCAACTATTATAAATGGTTTAGTGGAAATTCTTTCAGCTTCTCGGAATAGAGA AGTTCTGAGAACATCAATTTATATTCTTTCTGAGCTGATTTTCACAGATGACAGTGTTGCAGAAACACTTAATAGTGTAG ATTCTGATTTTGATTGCTTGGCTACTCTACTCAAGAATGGTTTGGCTGAGGCTGCTCTTCTTATTTACCAACTACGGCCG GTTTTTGCCCAGCTTTCAGCTCATGAACTTATACCCTCTCTTGTTGATGTGATCCAGAACAAAAATGAGGAGTTAGATGA TTTTCAGTTAGTTATAGACCCCAAAGACGCTGCCATAGCTATTCTTGAACAAACTTTAATGGGAGGGGATGAATATAGCA GGTCTCTTAATGCTTCGAGTGTTATTTCAGCAAATGGAATTCCAACCTTGGTGAAGTATTTGGAGAGGATGGAAGGAAGG AGGTCTGTGGTTTCCGTGCTCTTGTGTTGTATGCAAGCTGAAAAAAGTTGCAAGAACTTGATAGCAAACAGAATTGAATT GTCTCCTGTTCTTGAATTATTCCACTCAGGAAATGATAGTGTGAGAGGAACATGTGTGGAGTTTCTCTCAGAACTGGTTC AATTAAATAGGTAAGCTTGCAGCTTTCTTACAGTACAAAAAATCTTCCTCTCTTCAGCTATTCACTGTAAAATGAAATAT CCATTGATGTGTTACTGTTTTCATCTTGTTCAATGTTTTAGAGGTGCATAACTGGAGAAATTAACAGTCTGTCTATGCTT CCTGCTAGAAGATGATAGAAACCATATTCATGTGAGAAACATCAGTTTCATGTTTACACTAAAATGGAGAAATTAAAGCA ACCATAATAGTTTATTTTTCACCAGTAATAACTCATTATGTGGAAAAGGTGCATATTTTTCACACCAATCAGAAGAAGTA ATACTTAAATGTTTTTCCTATTAAACATTCCCCTCATTTTAATTTACAGGAGTTTGCCTTTATTATATTAAACTGTGAAG TCATGTTTTTTACAAGTTGTACTGTTGTGCTATTCACATCCATTACAGACTCAAGAACTTATCATTACTTTTCTATGGTG CTACAGAAGGACAAGCTGCAACCAGATACTGCACACAATTAAGGATGAAGGAGCATTCAGTACAATGCATACATTTCTTG TATATCTTCAGATGGCTCCTATGGAGCATCAACTTGCTGTTGCTAGTCTCCTTCTTCAGCTTGATCTCCTGGTCAGCCTT TTTAGATAAAATTCTTCCTATTAAAATAAAATGTGGTCTATGCTCTCCTGTTGCCTAACCATGTTTGGATTGATGGAAAG AGATGGAATGGAAGGGAACGATAATAGGTTTCATTAGTTAGATTTTTTAAAATAAGATGGAATGGAACATGATGAAATTC ATTCCATCCCATTATTCCACTTTTTATTCCCTTCCAATTTGTGCAGAATGTGATGAAAAGGAGTATTTTTTTTCTTCTCA ATTAATTCATTCAAATATCCAAATAATGAAATGGTAGCTCTACTACTTCATTCCATTCCTTTCCATTTCATGCCATCTTA TTCCATTTTATTCCCCTCTCTATTAGATGTGAAAACAAAACCTAAATATATTTCTTGTTCTGGTTAAATCTTCAGGCTGA GCCACGAAAGATGAGCATTTACAGGGAAGAAGCTGTAGAGACTCTGATAGAAGCACTTTGGCAGAAAGACTTCTCAAATA CCCAAATGAAGGCTTTAGATGCTTTACTATTTCTTATTGGACACATCTCTTCCTCCGGAAAGTCATACACTGAAGCTTGG TTGCTCAAGATTGCAGGATTTGATCAACCTTACAATGCTTTAATGAAGGTCGAGCAGTTAGGACAGCATGACAATGATTT GATAGAAACAATGGTATAGGACTTTGTGAAATTTTGGTTGTTGTTTTGGATTTGGTTGATAACTGACTTTTCTCCATACT AACACAAAATTTTCTTACATAGGAGGATGAAAAAAATGCTTTGAACTCTTGGCAGAAAAGAATAGCATCTGTGCTTTGTA ATCATGAAAATGGTTCAATATTTAAGGCTTTGGAAGAATGCCTAAAAAGTAATTCCTTAAAGATGGCAAAGTCATGCCTT GTTCTAGCCACATGGCTCACACACATGCTCTATACTCTTCCCGATACCGGTGTAAGGGATGTTGCTCGCAAATCCTTGCT TGAAGAAGTTATAAATGTTCTTCAGTCGTCCAAGAACTTGGAGGAGAAGATCCTGGCTACCCTAGCTTTGAAGACATTCA TTAGTGATCCAAGTAGGTTTGTTATAATAGTTGTAGACACTGTCTGTGTGTGTTACTATAAAAAGGAGTACTAATTTGAA AAGTGTCAATTTTTCAGGTACTCATGAAGCTCTTAGAGTTTACGCTAAAAGCATCTATAGAACCTTGAGGAGGCTGAAGA AATATTCAGTGGTTGCAGTTGATATTATGAAAGTCATACTAAATTTAAAATCTGTCGATGTGGTAAGTGGAATGGTGACT TAGGATCTGGTTCATTACATGTGATGTATTGATTTAGAACAGTAACTATTTCAATTTCTATTTTATAGACAGAATTGTGG AGTTGTAAAGAAGTTGTTGAGTTAGATTTGAGCTCAAATGGTGAGGTGCTTTCTATGGTTTATCTGAATGGTCAAGTCTT GAGTGGACACACTGATGGAACTATCAAGGTAGAGTGTCCTAACAATCAGAAACAGTATAGTCGCGTGCATGTGTCTGGCT AATTTTTCTAACAGTGTCATTTGATATCTTCCTACTAGGTATGGGATGCAAGGAAGAGAATACCAAGAGTGATTCAAGAA ACTCATGAACACACAAAAGCTGTAACATCTCTTTGTTCTTCAGGTGATAGACTATACAGTGGCTCCTTAGACAAAACCAT CAGGGTAAACTTTCTTGCTGTTACAAGATAAATTCGCATAGAATAAAGAGAAAAAGAAAATAATTATCCATTCCCAGCAT AGAATAAAGTGATTTTCCTGCAATAAATTTGTTAATAAAGTTTACTGGAATATGCAAATAGAAATGAGTTTGTTTACCAT AGAAAAAGCTAGTGCATTCTTATAGTTTGTTATGTACTCTTAATTAACCAAAACAAATAGTAGAGTGAATCTTATGAGTA GTTAGTTACTTACCTTATGTTTACTTCCCAAATTACTTGCATCTTAGTGTTTCCTGTGTTTTAATAGAGCATTGAATATG TATAACTGATTAATACTTCTTATGCACAGGTTTGGACAATTAAATCTGATGGTATTAAATGTATAGATGTTTATGACATT AAGGAGGCAGTGCATGAGCTTGCAGCCAATGATAAATTGGCATGCTATGTCTCTCAAGGAACTGGTGTTAAGGCAAGTTT AACATTTTGCTTGATCAACTCATAAAATCCAGTTCCATCATAAGATAAAATTAATAAAATTTGATATTTACAGGTTTTTA ATTGGTCAGAGGCTCCAAAGCTCATCAATTTCAGCAAATATGTGAAAAGCCTTGCTGTTGCTGGGGACAAGCTGTATTGT GGTTGCTCTGGTTACAGCATCCAGGTAAGCAACCATCTTCCTACATTGTTTCATGTTCTTGTAGAATCTTTAGCTGATGT AACCAACCAACAAAGATTGCTTAAGAGTTAATGATAGGTAACCGTAGCTAGTTAGTTGTTAGGTAGTCAGTCGAGGTAGT TTTAGTTAGTTTGAGAGAGTTAGTTAGAGGGTGAGAGAGGAAATATTATAAACAAGAGATAGATAGTGAAAAATATCACC TTTTAGGATCATCTGTAATTGCGAATCAAGGAAAGGTGCTGAGACTCTGAAATTACTCAGCATCGTTGTAGTTTATATAC TCGAATAATATCAGTTTTCTTCTTCTTATTGGTTGGTATCTATCAGTTAAGATCCATGTGTTCTTTCAATGCATCCAAAA GTTTCTCTAGAAATTGTCCATCTTCCTTACAAGTTATGGGGGTGAATATGGCAGGAGGTTGACTTGTCAACATATACATC AAATTCCTTCTTCACTGGTACAAGAAAATTGTTGGGGAAACAAACCATACACTCCCTTCAAATACATGATGATTACCTCT TTGCTTGTGGTTCTTCAGTTGATGCAACTGCCGGAAAGGTAAATGCCAATTCTAACTCCAAGACAAAGTTATTGTGTGTG TTTGGATACTAGTGTTCATCATAAACGGATTTTCATCTCAACTCATAAGAAGTTTCATTCAGTTTTTGTCTTAAAATATG TGCTAACGCCCATTTACGCCCAGCTGATATCCAAACATAGTCATTGTCATTATAAATAAGCATCCTTCATTGTTAAACTA ACTCTTCCCTTCAATTGATGTTTGTAAGATATTTTCACTTTCCCAAAAAATGGTGGTGGGATCACTCTCAACTGGGCTTG ACATTCATCGCATAGCCATCAACAGTGACTTCATATTTGCTGGTACAAAATTTGGCACCATTGAGGTTTGGCTGAAAGAT AAGTTTACCCGGGTTGCTTCCATCAAAATGGCTGGTGGTCACACAAAAATTACATCATTAGTATCAGATGTAGATGGTAT GATGCTTTTTGTTGGTTCCTCTGATGGCAAAATCCAGGTTAGGCCCTTATCATCATAACAGTCATAAATCATGATAATAA TATAACTAAGTTACTTCTTTCCATTAACCCCCTTTCCTCCATGGATTCTTGCTGCAGGTTTGGGCTTTGGATTAA
CDS sequence (LotjaGi5g1v0256800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAAACTTCAGATTCATGATGGATCAGAAGGATATTGTTAGATTCTTGACTACAACTGTTGATAGTTTCATTCA AGATCGATTAATCAACAAAGAGCAAAGAACCCAACACAAAGAACAGTGTGCAGAGAGGTTAGCAGCAGAAGATGGAAGTG GTGACAAAGACACTGAGGTGGAATACTCTGATCAAGCAGTATTAGCAAATCTTGATTGGGGTATTGAAGCCCTTGAGGAA GCCATCAATACCTATAACATGGAAACCAAGCTTGCAAGGCTAGATTATGCTGAGAAGATGTTGCAAGTGTGTGCAATGTT GAACCCTAAGCAAAAGATTGCTGGAGTTCCAAACTCCTACCTCTCAGCTTGGGCACACCTAAACCTATCCTATTTATGGA AGCTGAGGAATAATGTTCAGAATTGTATTTCTCATGCTCTTGAGATGTTCATCGTTGATCCCTTTTTCACTCGGATTGAT TTCGCTCCAGAACTCTGGAAAAGCCTGTTTCTTCCACACATGAGCTCAATTGTGGGGTGGTATTCAGAGGAGAGGCACAG GCTTATGATGGAGGTGATACCTGACTCTGCTGATTTGTCCTTCACAGCTGATTTTGAGCAATTTTTCAATGAGTCTTTGG TGCTTACTATGAGGCCACATCAATTGGAAAAGTTGCAAAAGCTGGAGCAGCTTTATGGAGAGTCCTTGGATGAAAACACA AAACTATATGCAAAATACTATAACGATTGCATGAACTCTGATTCCTCTTCAAGTAAGAAGGCGGTTCCTATGTTGCCAAT TGCTGAGCCCCCAATGACTCCTTTGCATGAGTTGAGCCGGACTATTCCAGATTTTGTTAAATTTGGTCCTATTTTACCTA AGAGTGCTGGTTTTTCTCTGGCACCAAGATCTAAAGATGTCTTAAATGAAACAATCAGAGAGAATGTAACTTCCAGCAAC TTGAAGGAGGAAAAATTATCCATATGGGGTGCTAAGGATACCATCATTGAAGAGAATGAAGATGATTCAGATTCTGAGCT TGAGAATGAATCTGTGGATTCTGATGACAAAAACAATATTTTCTCACCTGGAATGAAGATGATGAAGTATGAGGGTGTTG AAACAAAAGTTGATCTATCATGCCAGAGGAATCAAATACCTTCTCCTGATATCTTCTCTCCCTTGGATTCTCCAAGAACT GCTCCAAATAATTCATCTCCAAACCCTGATATGCATAGTAAAAGAGATTCCAAGTTTTTGCGCTTATCATCTAGCCGCAT CAGGGAACCAACTATTTCTGACTCCTTAACATCATCTCCAGACATTAGCATTGATAACATTTCAAATGCTGATAACGAAG TGATGGTCTTGAAGAATATTCAGAGGAAAAATGATAACCAAACACTGAGTATGAATCATGAGAATGAGAACAGCCTGATA CTAAATGGCAGTTCCCTTTGTGAAAGTGATGATGGATATCAAAGCTTCAATTCATTGCCAAAATTAGAGAAGCTGAGTAT GGGATCAAAACCACCCAAAGATTTTGTTTGCCCAATTACAGGTCAGATATTCTGTGATCCTGTCACCCTTGAAACTGGCC AAACCTATGAGAGAAAAGCAATTCAAGAGTGGCTCAGAACAGGAAACACAACATGCCCCATCACGCGACAGCCTCTATCT GCAAGCATATTACCCAAAACAAACTATGTTTTGAAGAGATTGATTACATCTTGGAAAGAACAGAATCCTGAACTAGCTCA AGAGTTCTCAAATGTTAACACACCAAGGGGTTCTTCCTGTTCTCCATCAGCAAAAGACATCCCAATGCTCTCAACTAGGC AAAGAACAACTGATTCACCAAATCATAAGAACAAAGATTATGCTAGACAAAGGAGCAATAGATTTATGCCAGCTGCTATC ACAACGTCTCCGACAAGTGTGCTATCTCAAGCTGCAGTTGAAACAATTGTGAATTCCTTGAAACCTTACATTTCAAGTCT ATGCACATCAGAGAACTTGCCAGAATGTGAAGAAGCTGTATTGAAAATAGCAAGATTGTTAAAGGACTCAAAGACTAATC CTCAGATTCATTCTTATTTATCAAAGCCAACTATTATAAATGGTTTAGTGGAAATTCTTTCAGCTTCTCGGAATAGAGAA GTTCTGAGAACATCAATTTATATTCTTTCTGAGCTGATTTTCACAGATGACAGTGTTGCAGAAACACTTAATAGTGTAGA TTCTGATTTTGATTGCTTGGCTACTCTACTCAAGAATGGTTTGGCTGAGGCTGCTCTTCTTATTTACCAACTACGGCCGG TTTTTGCCCAGCTTTCAGCTCATGAACTTATACCCTCTCTTGTTGATGTGATCCAGAACAAAAATGAGGAGTTAGATGAT TTTCAGTTAGTTATAGACCCCAAAGACGCTGCCATAGCTATTCTTGAACAAACTTTAATGGGAGGGGATGAATATAGCAG GTCTCTTAATGCTTCGAGTGTTATTTCAGCAAATGGAATTCCAACCTTGGTGAAGTATTTGGAGAGGATGGAAGGAAGGA GGTCTGTGGTTTCCGTGCTCTTGTGTTGTATGCAAGCTGAAAAAAGTTGCAAGAACTTGATAGCAAACAGAATTGAATTG TCTCCTGTTCTTGAATTATTCCACTCAGGAAATGATAGTGTGAGAGGAACATGTGTGGAGTTTCTCTCAGAACTGGTTCA ATTAAATAGAAGGACAAGCTGCAACCAGATACTGCACACAATTAAGGATGAAGGAGCATTCAGTACAATGCATACATTTC TTGTATATCTTCAGATGGCTCCTATGGAGCATCAACTTGCTGTTGCTAGTCTCCTTCTTCAGCTTGATCTCCTGGCTGAG CCACGAAAGATGAGCATTTACAGGGAAGAAGCTGTAGAGACTCTGATAGAAGCACTTTGGCAGAAAGACTTCTCAAATAC CCAAATGAAGGCTTTAGATGCTTTACTATTTCTTATTGGACACATCTCTTCCTCCGGAAAGTCATACACTGAAGCTTGGT TGCTCAAGATTGCAGGATTTGATCAACCTTACAATGCTTTAATGAAGGTCGAGCAGTTAGGACAGCATGACAATGATTTG ATAGAAACAATGGAGGATGAAAAAAATGCTTTGAACTCTTGGCAGAAAAGAATAGCATCTGTGCTTTGTAATCATGAAAA TGGTTCAATATTTAAGGCTTTGGAAGAATGCCTAAAAAGTAATTCCTTAAAGATGGCAAAGTCATGCCTTGTTCTAGCCA CATGGCTCACACACATGCTCTATACTCTTCCCGATACCGGTGTAAGGGATGTTGCTCGCAAATCCTTGCTTGAAGAAGTT ATAAATGTTCTTCAGTCGTCCAAGAACTTGGAGGAGAAGATCCTGGCTACCCTAGCTTTGAAGACATTCATTAGTGATCC AAGTACTCATGAAGCTCTTAGAGTTTACGCTAAAAGCATCTATAGAACCTTGAGGAGGCTGAAGAAATATTCAGTGGTTG CAGTTGATATTATGAAAGTCATACTAAATTTAAAATCTGTCGATGTGACAGAATTGTGGAGTTGTAAAGAAGTTGTTGAG TTAGATTTGAGCTCAAATGGTGAGGTGCTTTCTATGGTTTATCTGAATGGTCAAGTCTTGAGTGGACACACTGATGGAAC TATCAAGGTATGGGATGCAAGGAAGAGAATACCAAGAGTGATTCAAGAAACTCATGAACACACAAAAGCTGTAACATCTC TTTGTTCTTCAGGTGATAGACTATACAGTGGCTCCTTAGACAAAACCATCAGGGTTTGGACAATTAAATCTGATGGTATT AAATGTATAGATGTTTATGACATTAAGGAGGCAGTGCATGAGCTTGCAGCCAATGATAAATTGGCATGCTATGTCTCTCA AGGAACTGGTGTTAAGGTTTTTAATTGGTCAGAGGCTCCAAAGCTCATCAATTTCAGCAAATATGTGAAAAGCCTTGCTG TTGCTGGGGACAAGCTGTATTGTGGTTGCTCTGGTTACAGCATCCAGGAGGTTGACTTGTCAACATATACATCAAATTCC TTCTTCACTGGTACAAGAAAATTGTTGGGGAAACAAACCATACACTCCCTTCAAATACATGATGATTACCTCTTTGCTTG TGGTTCTTCAGTTGATGCAACTGCCGGAAAGATATTTTCACTTTCCCAAAAAATGGTGGTGGGATCACTCTCAACTGGGC TTGACATTCATCGCATAGCCATCAACAGTGACTTCATATTTGCTGGTACAAAATTTGGCACCATTGAGGTTTGGCTGAAA GATAAGTTTACCCGGGTTGCTTCCATCAAAATGGCTGGTGGTCACACAAAAATTACATCATTAGTATCAGATGTAGATGG TATGATGCTTTTTGTTGGTTCCTCTGATGGCAAAATCCAGGTTTGGGCTTTGGATTAA
Protein sequence (LotjaGi5g1v0256800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGNFRFMMDQKDIVRFLTTTVDSFIQDRLINKEQRTQHKEQCAERLAAEDGSGDKDTEVEYSDQAVLANLDWGIEALEE AINTYNMETKLARLDYAEKMLQVCAMLNPKQKIAGVPNSYLSAWAHLNLSYLWKLRNNVQNCISHALEMFIVDPFFTRID FAPELWKSLFLPHMSSIVGWYSEERHRLMMEVIPDSADLSFTADFEQFFNESLVLTMRPHQLEKLQKLEQLYGESLDENT KLYAKYYNDCMNSDSSSSKKAVPMLPIAEPPMTPLHELSRTIPDFVKFGPILPKSAGFSLAPRSKDVLNETIRENVTSSN LKEEKLSIWGAKDTIIEENEDDSDSELENESVDSDDKNNIFSPGMKMMKYEGVETKVDLSCQRNQIPSPDIFSPLDSPRT APNNSSPNPDMHSKRDSKFLRLSSSRIREPTISDSLTSSPDISIDNISNADNEVMVLKNIQRKNDNQTLSMNHENENSLI LNGSSLCESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLS ASILPKTNYVLKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYARQRSNRFMPAAI TTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEAVLKIARLLKDSKTNPQIHSYLSKPTIINGLVEILSASRNRE VLRTSIYILSELIFTDDSVAETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVDVIQNKNEELDD FQLVIDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIPTLVKYLERMEGRRSVVSVLLCCMQAEKSCKNLIANRIEL SPVLELFHSGNDSVRGTCVEFLSELVQLNRRTSCNQILHTIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLAE PRKMSIYREEAVETLIEALWQKDFSNTQMKALDALLFLIGHISSSGKSYTEAWLLKIAGFDQPYNALMKVEQLGQHDNDL IETMEDEKNALNSWQKRIASVLCNHENGSIFKALEECLKSNSLKMAKSCLVLATWLTHMLYTLPDTGVRDVARKSLLEEV INVLQSSKNLEEKILATLALKTFISDPSTHEALRVYAKSIYRTLRRLKKYSVVAVDIMKVILNLKSVDVTELWSCKEVVE LDLSSNGEVLSMVYLNGQVLSGHTDGTIKVWDARKRIPRVIQETHEHTKAVTSLCSSGDRLYSGSLDKTIRVWTIKSDGI KCIDVYDIKEAVHELAANDKLACYVSQGTGVKVFNWSEAPKLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLSTYTSNS FFTGTRKLLGKQTIHSLQIHDDYLFACGSSVDATAGKIFSLSQKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWLK DKFTRVASIKMAGGHTKITSLVSDVDGMMLFVGSSDGKIQVWALD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1485 | 1485 | 0.0 | – | |
| PANTHER | 1 | 1485 | 1485 | 0.0 | – | |
| MobiDBLite | 337 | 363 | 27 | - | – | |
| MobiDBLite | 337 | 351 | 15 | - | – | |
| MobiDBLite | 384 | 417 | 34 | - | – | |
| MobiDBLite | 384 | 410 | 27 | - | – | |
| Gene3D | 497 | 593 | 97 | 2.6E-25 | ||
| SUPERFAMILY | 510 | 583 | 74 | 9.08E-24 | – | |
| ProSiteProfiles | 510 | 585 | 76 | 39.533 | ||
| Pfam | 512 | 582 | 71 | 6.1E-15 | ||
| SMART | 514 | 578 | 65 | 2.4E-27 | ||
| CDD | 515 | 557 | 43 | 1.96704E-19 | – | |
| Gene3D | 641 | 1018 | 378 | 1.5E-14 | ||
| SUPERFAMILY | 652 | 1166 | 515 | 1.49E-14 | ||
| Coils | 1113 | 1133 | 21 | - | – | |
| SMART | 1194 | 1232 | 39 | 0.4 | ||
| ProSiteProfiles | 1203 | 1283 | 81 | 13.527 | ||
| SUPERFAMILY | 1217 | 1484 | 268 | 6.28E-32 | ||
| Pfam | 1217 | 1232 | 16 | 0.17 | ||
| ProSitePatterns | 1219 | 1233 | 15 | - | ||
| ProSiteProfiles | 1219 | 1232 | 14 | 8.604 | ||
| SMART | 1237 | 1274 | 38 | 8.8E-5 | ||
| ProSiteProfiles | 1244 | 1277 | 34 | 10.174 | ||
| Pfam | 1245 | 1273 | 29 | 0.0041 | ||
| SMART | 1442 | 1483 | 42 | 0.025 | ||
| ProSiteProfiles | 1451 | 1485 | 35 | 10.258 | ||
| ProSiteProfiles | 1451 | 1485 | 35 | 10.642 | ||
| Pfam | 1453 | 1482 | 30 | 0.16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi5g1v0256800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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