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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0260500 |
| Transcript ID | LotjaGi5g1v0260500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like kinase; TAIR: AT1G03440.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA; TrEMBL-Plants: tr|V7BG88|V7BG88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0260500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56899515..56900723) extracted from Lotus japonicus Gifu genome v1.2.
TTACCTCCATCAATGGCGTTGAAGCGCGTGGCTCTGTTTTTCTTCTTCTGCTTCATGCAAACGCACCTTCATCTTCATGT CCTCGCCATTTTGGATCCCTCTGATTTCCTCGCTCTGCAATCCATTCGTAAGTCCCTCGAAGACATGCCTGGTTCTGAGT TCTTCTCCACCTGGGATTTCACCGCCGATCCTTGCAGTTTCTCCGGCGTTTACTGCGATTCCGACAAGGTCATCGCCCTC AACCTCGGCGACCCGAGAGCCGGTTCACCCGGCTTAACCGGCCGCCTCGACGCGGCCATCGGCAAGCTCTCCTCTCTCGC TGAGTTCACCGTCGTTCCTGGAAGAATCTACGGTCCTCTGCCTCAAACGCTACCCGATTTGAAGAATCTCAGGTTCCTCG GCGTCAACCGGAACTTCATCTCCGGCGAGATTCCGCCAGGGCTCGGTAATCTCCGCAGCCTAAGGACCATCGACTTGAGC TACAACCAGCTCACCGGAAGCCTCCCTCAGTCTGTTGGTTCCTTACCGGAGCTAACCAACCTGATGCTCTGCCACAACCG CCTCTCCGGTTTTCTTCCCCGGTTCGAGTCTCAGAAATTAACTCGGCTCGACCTCAAGCACAACGCGCTCACCGGTTCGC TCGCTCCGAGTTCACTTCCTCCGTCTCTCCAGTATCTCTCCCTGGCGTGGAACAATCTCACCGGACCGGTGGACCGGCTA CTATCCCGGCTCGACCAGTTAAACTACCTAGACCTCAGCTTGAACCAGTTCACCGGCCCGGTCCCGGCCCGGATCTTCTC ATTCCCGCTGACCAACCTCCAGCTAGAAAGGAACCAGTTCTACGGCCCGGTTCAACCGGTGGATAGAGTCGCGATCCCCA CCGTGGATCTCAGCTACAACCGATTCTCCGGTCAGATATCGCCGATGCTGGCGAGTGTGCAGAGTTTGTACCTGAACAAC AACCGGTTCTCGGGTCGGGTTCCGGCTAGCTTTGTTGACCGGTTGCTGGATGCGAGCATTCAGATACTGTATTTGCAGCA CAACTACCTCACCGGGATTGAGATAAGCCCCACGGCGGTGATTCCGGGGAGAAGCTCGCTGTGTCTGCAGTACAATTGCA TGGTGCCGCCGGTGGAGGCGCCGTGTCCGTTGAGAGCTGGGAATCAGAAAACAAGGCCCACTACACAGTGCAACCAGTGG AAAGGATAG
CDS sequence (LotjaGi5g1v0260500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTGAAGCGCGTGGCTCTGTTTTTCTTCTTCTGCTTCATGCAAACGCACCTTCATCTTCATGTCCTCGCCATTTT GGATCCCTCTGATTTCCTCGCTCTGCAATCCATTCGTAAGTCCCTCGAAGACATGCCTGGTTCTGAGTTCTTCTCCACCT GGGATTTCACCGCCGATCCTTGCAGTTTCTCCGGCGTTTACTGCGATTCCGACAAGGTCATCGCCCTCAACCTCGGCGAC CCGAGAGCCGGTTCACCCGGCTTAACCGGCCGCCTCGACGCGGCCATCGGCAAGCTCTCCTCTCTCGCTGAGTTCACCGT CGTTCCTGGAAGAATCTACGGTCCTCTGCCTCAAACGCTACCCGATTTGAAGAATCTCAGGTTCCTCGGCGTCAACCGGA ACTTCATCTCCGGCGAGATTCCGCCAGGGCTCGGTAATCTCCGCAGCCTAAGGACCATCGACTTGAGCTACAACCAGCTC ACCGGAAGCCTCCCTCAGTCTGTTGGTTCCTTACCGGAGCTAACCAACCTGATGCTCTGCCACAACCGCCTCTCCGGTTT TCTTCCCCGGTTCGAGTCTCAGAAATTAACTCGGCTCGACCTCAAGCACAACGCGCTCACCGGTTCGCTCGCTCCGAGTT CACTTCCTCCGTCTCTCCAGTATCTCTCCCTGGCGTGGAACAATCTCACCGGACCGGTGGACCGGCTACTATCCCGGCTC GACCAGTTAAACTACCTAGACCTCAGCTTGAACCAGTTCACCGGCCCGGTCCCGGCCCGGATCTTCTCATTCCCGCTGAC CAACCTCCAGCTAGAAAGGAACCAGTTCTACGGCCCGGTTCAACCGGTGGATAGAGTCGCGATCCCCACCGTGGATCTCA GCTACAACCGATTCTCCGGTCAGATATCGCCGATGCTGGCGAGTGTGCAGAGTTTGTACCTGAACAACAACCGGTTCTCG GGTCGGGTTCCGGCTAGCTTTGTTGACCGGTTGCTGGATGCGAGCATTCAGATACTGTATTTGCAGCACAACTACCTCAC CGGGATTGAGATAAGCCCCACGGCGGTGATTCCGGGGAGAAGCTCGCTGTGTCTGCAGTACAATTGCATGGTGCCGCCGG TGGAGGCGCCGTGTCCGTTGAGAGCTGGGAATCAGAAAACAAGGCCCACTACACAGTGCAACCAGTGGAAAGGATAG
Protein sequence (LotjaGi5g1v0260500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALKRVALFFFFCFMQTHLHLHVLAILDPSDFLALQSIRKSLEDMPGSEFFSTWDFTADPCSFSGVYCDSDKVIALNLGD PRAGSPGLTGRLDAAIGKLSSLAEFTVVPGRIYGPLPQTLPDLKNLRFLGVNRNFISGEIPPGLGNLRSLRTIDLSYNQL TGSLPQSVGSLPELTNLMLCHNRLSGFLPRFESQKLTRLDLKHNALTGSLAPSSLPPSLQYLSLAWNNLTGPVDRLLSRL DQLNYLDLSLNQFTGPVPARIFSFPLTNLQLERNQFYGPVQPVDRVAIPTVDLSYNRFSGQISPMLASVQSLYLNNNRFS GRVPASFVDRLLDASIQILYLQHNYLTGIEISPTAVIPGRSSLCLQYNCMVPPVEAPCPLRAGNQKTRPTTQCNQWKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| PANTHER | 11 | 398 | 388 | 8.2E-169 | – | |
| PANTHER | 11 | 398 | 388 | 8.2E-169 | – | |
| Phobius | 18 | 25 | 8 | - | – | |
| Phobius | 26 | 398 | 373 | - | – | |
| Gene3D | 28 | 193 | 166 | 2.1E-35 | ||
| SUPERFAMILY | 28 | 370 | 343 | 3.85E-47 | – | |
| Pfam | 29 | 69 | 41 | 2.2E-8 | ||
| SMART | 123 | 146 | 24 | 270.0 | ||
| Pfam | 125 | 184 | 60 | 1.6E-6 | ||
| SMART | 147 | 170 | 24 | 17.0 | ||
| SMART | 171 | 193 | 23 | 47.0 | ||
| Pfam | 193 | 208 | 16 | 0.53 | ||
| Gene3D | 194 | 373 | 180 | 8.5E-31 | ||
| Pfam | 217 | 231 | 15 | 1.5 | ||
| SMART | 240 | 264 | 25 | 130.0 | ||
| SMART | 306 | 329 | 24 | 91.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0260500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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