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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0269000 |
| Transcript ID | LotjaGi5g1v0269000.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT3G25620.2 ABC-2 type transporter family protein; Swiss-Prot: sp|Q7XA72|AB21G_ARATH ABC transporter G family member 21; TrEMBL-Plants: tr|I1LCU7|I1LCU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0269000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58206522..58211218) extracted from Lotus japonicus Gifu genome v1.2.
GAGAAGACAATGAGACTGTTTGGATGCGGATAGAAAACATTTATTAAAATTTATTAAGTGTTTTTTATAGTAGATAAGCT CCAAAATGCTCTTGACTATGTAAATGTTCAAAATGGCCCAAAGAGGTACTTAGTTTTGCATGAAATGGATATGTTTGCCT ATCTTTGAAATTGAGGCCATTTTTCGTTCCTGTGTCTTTGTTTTGTAGTTTGAAGACGTTTCATACAGCATAACCTTGCA AAGTCAAAAGAATAAAGGATGTGTTCTTCCAAAAGAGGCAAAAGTAACCAGAAGACTCCTCAGCGGCGTGACGGGGATAG CGAAACCCGGCGAACTGACGGCAATGTTGGGCCCCTCAGGGAGCGGCAAGACCACCCTCCTCACCGCCCTCGCCGGAAGA CTCACTGGAAAAGTCTCTGGCACCATAACCTACAATGGAAACCCGGACCCCACCTGCATGAAGCGCAGGATCGGGTTCGT ATCGCAAGACGACATCGTCTACCCTCATCTCACCGTGCTTGAGACGCTCACCTACACCGCCCTACTGAGGCTACCAAATA GCCTCACTAGGGAGGAGAAGGCAGAGCATGCAGAGAGGGTGATTACGGAGCTTGGATTAACACGATGCCGGAACAGCCCC ATCGGCGGGTGCATGGGGGTTTTCCGGGGAATCTCCGGCGGGGAGAGGAAAAGGGTGAGCATTGGGCAGGAGATGTTGGT GAACCCGAGTTTGCTGTTGCTGGATGAACCGACGTCCGGTCTGGACTCGACAACGGCTCAGCTTATCGTTTCGGTTCTCC GAAGGCTCGCCCGAGCTGGTCGAACCGTGCTTACCACCATTCACCAACCGTCGAGTCGGTTGTACCGGATGTTTGATAAG GTTGTGGTGCTTTCTGACGGGTGCCCCATTTATAGTGGTAATGCAGGTCGGGTCATGGATTATCTTGAGTCGGTTGGTTA TATGCCCGCTTTCAACTTTGTCAACCCGGCTGATTTTCTTCTTGACCTTGCTAACGGTAAGTTATTTGTCAATAGAATTA GCCTAATTCACATCATAGATAAAATTCATATATATAAGTTTTCAATGAATATCTCATTTACATTTCTTTGTTAAACATAT TCGCTTCAGTTGGTTAGAACGAGTCACTTCCCCATAGAAGGTTGTGTGTTCAATTCTCGCTGCCAATATGAGGGTAAGAT TGGTGAGTGATTTGAAGTATCTCTATGAGCGGCCTATGGTCTTGGAAACATGGTCTGACCCGTGATTGTCACCAAAATCG AACACACAACCCAAACTTTTATTCATAGATATTTATGTTTGATGTATACTATTTTGGTTAAACACCTAAAGTAAGATAAG AAGAAAAGATAGATAAATGATAGAGGACGCATCCATAATTTTATTATTGGGTCGCAACAAAATACGAAAAAATTTAATTT TTTTGGGATAAACTAAGGATTAAAAAATTGTATATAAAGTTACATAAAAAAAAAATCAAATTCTCAAGGTGTAGTGGCCC TTGTCTGCTCCTCTTAGATGCACTCTTGATTATAGATGTGATATATGATATGATGTATTAGATAATTAAAAATAAAGAGA AAAACATTGATGCTTGTGGGTGTCGATATTGTTTTGTGATCTATCCATAAATCTATTTAAAAATTAAAAAGAAAAAGGTA TGGTGGAATATATGTGATAAAGAAAATTGTAAAGTGAAATGTAATAAAAGATAAAGATATGATGGAGATTATATAAGAGA TAAAGAAAGTTGTAAAGTAAATGTGATGGCCCAAATTTATTGTAGAGATATTATTAGATCCTCTTCCATCATCAAAATGC TTTCCCTTTCTCTATTCAAATCTTAATCATAAGTTTATGTACAATAATAGTCCGAGAACACAACACACTTCATCATCTAC AAGTTGTTATCAGACTTTTTACCGAGATGCAATTGAAAAGATACAGTGAGCTGTGCAATTGAAAAAATGTTAAGGAGAAA TAAGGTAAAGAAAAATCATGGCACATGTGGCAAATAGGATCAAGGTGGAAAAGCTGATGTGTAAATTATTAAATGTGAAT TAATAGGTGGACAAGCTGACGTGTAAATAATTAAGTGAGAATTAATCTCGGAGCGATACGTCACGAACTTGGCCTGTGAG AGCGACACGTAATGCTAAAAGTTATTCTTTTTTAATATATTTTGATATTGATATTGATTATAATGTTTCATGTTTGTGAA TTTTTATCAAGAGAATATTTATTCTCGTATTTCTACAATGAGAAGGGAAAGTTTGTGATTTTGTGCATGTCAACTTCATG AAACAAAAGTGACCCCATGTGCGTGATATTTAGAGAGGGAGTTCAACACTTGTCGTTAATTGTAAGGTGATGGCTCATTT TCAAATTTTTGATAATGGTGGTCAAAAGGGTTGAGCTTTTACTCTGAAAACCCATGCAAGGTGGCAAGAGATAATGCGTC ATTAGCAGCAGTAAATTGAAAAGACACTGTTGCTAAAAGAAATCCCTCTTTGCCTTGGGCCAGTTTCACAACATGTGAGA TTTCTTTTGTGTTGTCATAGATCAACACAAGAGAAACTTAACAAGTGTTGTAAGGTGCTTGGAATAATGTCACATATTGT CTTACTTTCAAAAGAATTTTGTGATTGGTGGAACAATTTTCCTAACAACAATTAGTAGTATGTTGGTTCTACAGTGAAAT GTTCTTGAATCACTTCTGATTAGAAACTATAATTCTTAGATTTTAAGTAAACATACATTACTAAAACATCCTTAGAGTGT CACAAGCCATGTATGACAATTCACAAGTTCATCCTAATTTTAAAATTAGATGAGAAATCAAACTCAGTTCCCTAGAATTG GACAAGATATCTGAAGACAAAAACAACAATAGTGGAAGCATCTTCAAGCATGGTTGATGATTGTCCTTGGATTTCTCTAA TATTTGGTTATAGGCCTGAGACTTGGGTGAATTTGCATTAAATTTCTTGAGAGAGATGCTAGTAATCCTTCTCATTCATT AGATTCTGGGGTTTTGCAGGCATAGTTGCTGATGTCAAACATGATGATCAGATAGAGCACCATGAGGATCAAGCTTCAGT CAAACAGTCCCTAATTTCATCCTATAAGAAGAACTTATATCCTCTTCTTAAAGAAGAGATTCATCAAAACAACAGTGAGC AAGTAGCTTTCACATCAGGAACAGCTAGACGTGAGTGAAATTAATCTAGCAGCAATGGACAGAGTTATGTTATATTACAC CATGGCTAAGTGTGTTCATTTTTCATTCTTGGCAGGTTCTGATAACCAATGGGCCACTAGCTGGTGGGAGCAGTTTAAGG TGCTTCTTAAAAGGGGTTTACAGGAAAGAAGGCATGAATCTTTCTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTGTCC ATTCTCTCAGGACTTCTATGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTATTGTGAATCTATGTTCTGTTTTT CCTGGGTGAAAATTCAAAAATAAAATGAATACTTTATAAAGCAAGGTTATTAATTGAGCAACTCAAAATTTCAAGTAATA GAAGGATTAAATTCTTTTGTGCCAATGGTGTCTCAACTTCCTGTTCCACTAACAAAACGTTGTCATGTCGATTAAAAATT TGTAACTACTTCACTCATGTTTTTTTTCAGTTGATATGACAAGATTTCATTATTGGACCGAAAGTTAAGACAAAATTTAT AGACAAAATATGTTAATCCGTAATTGGAATCGGATGAAGATCTTGTGCCCTCATTTGGGGTCTTCTTCCCTATCCAGTCC CACCGACCAAATTGAGTCATGTATGTATGAGTATGGAAATTATATCTTTACGCTGGTGTTTTAAGTGATATGACACAATT TGATTGATCGGATAGAGAAAGAAACACCAAATGGGATAGAGGGTATCATTTCCTAGTTAATTTGCTTTAAAATTCAATAG AAAGTGGTGAATTGTAGTACTTATAACAACATAACTCTTGTAACAGGTAGGACTACTTTTCTTCTTCTCCATATTCTGGG GATTCTTCCCTCTCTTCAATGCAATCTTTGCATTCCCTCTCGAGAGGCCAATGCTAATAAAAGAAAGATCATCAGGAATG TACCATCTCTCCTCCTACTATGTTGCTAGGATGGTGGGAGACTTACCAATGGAGCTTGTTCTTCCCACTATGTTTGTAAC CATCACCTACTGGATGGGTGGTCTCAAACCTTCACTAGTCACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTTC TGGTCTCTCAAGGAATAGGCCTTGCATTGGGGGCAATTCTCATGGATGTGAAGCAGGCCACAACACTAGCTTCAGTGACC ATGCTCGTTTTTCTGTTGGCTGGTGGTTACTACATTCAGCAAATGCCTTCTTTTATAGCTTGGTTGAAGTACATTTCTTT CAGCCATTACTGCTATAACCTGCTGGTAGGTGTTCAGTATTCAGTGAATGAGGTGTATGAGTGTGGGAAAGGATTGCATT GTAAGGTGAGAGATTTTCCAGCTATAAGGTGTTTGGAACTTGATGACTTGTGGGGAGATGTGGCTGCATTGGCTGTGATG TTTGTTGGATACAGAGTTGTGGCATATCTAGCTTTGAGGATGGGGCAGCCTCACTGA
CDS sequence (LotjaGi5g1v0269000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGGCCCCTCAGGGAGCGGCAAGACCACCCTCCTCACCGCCCTCGCCGGAAGACTCACTGGAAAAGTCTCTGGCAC CATAACCTACAATGGAAACCCGGACCCCACCTGCATGAAGCGCAGGATCGGGTTCGTATCGCAAGACGACATCGTCTACC CTCATCTCACCGTGCTTGAGACGCTCACCTACACCGCCCTACTGAGGCTACCAAATAGCCTCACTAGGGAGGAGAAGGCA GAGCATGCAGAGAGGGTGATTACGGAGCTTGGATTAACACGATGCCGGAACAGCCCCATCGGCGGGTGCATGGGGGTTTT CCGGGGAATCTCCGGCGGGGAGAGGAAAAGGGTGAGCATTGGGCAGGAGATGTTGGTGAACCCGAGTTTGCTGTTGCTGG ATGAACCGACGTCCGGTCTGGACTCGACAACGGCTCAGCTTATCGTTTCGGTTCTCCGAAGGCTCGCCCGAGCTGGTCGA ACCGTGCTTACCACCATTCACCAACCGTCGAGTCGGTTGTACCGGATGTTTGATAAGGTTGTGGTGCTTTCTGACGGGTG CCCCATTTATAGTGGTAATGCAGGTCGGGTCATGGATTATCTTGAGTCGGTTGGTTATATGCCCGCTTTCAACTTTGTCA ACCCGGCTGATTTTCTTCTTGACCTTGCTAACGGCATAGTTGCTGATGTCAAACATGATGATCAGATAGAGCACCATGAG GATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCCTATAAGAAGAACTTATATCCTCTTCTTAAAGAAGAGATTCATCA AAACAACAGTGAGCAAGTAGCTTTCACATCAGGAACAGCTAGACGTTCTGATAACCAATGGGCCACTAGCTGGTGGGAGC AGTTTAAGGTGCTTCTTAAAAGGGGTTTACAGGAAAGAAGGCATGAATCTTTCTCTGGCTTAAGGATTTTCCAAGTCTTG TCTGTGTCCATTCTCTCAGGACTTCTATGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTAGGACTACTTTTCTT CTTCTCCATATTCTGGGGATTCTTCCCTCTCTTCAATGCAATCTTTGCATTCCCTCTCGAGAGGCCAATGCTAATAAAAG AAAGATCATCAGGAATGTACCATCTCTCCTCCTACTATGTTGCTAGGATGGTGGGAGACTTACCAATGGAGCTTGTTCTT CCCACTATGTTTGTAACCATCACCTACTGGATGGGTGGTCTCAAACCTTCACTAGTCACATTTGTGTTAACCCTCTTGAT CATGCTTTTCAATGTTCTGGTCTCTCAAGGAATAGGCCTTGCATTGGGGGCAATTCTCATGGATGTGAAGCAGGCCACAA CACTAGCTTCAGTGACCATGCTCGTTTTTCTGTTGGCTGGTGGTTACTACATTCAGCAAATGCCTTCTTTTATAGCTTGG TTGAAGTACATTTCTTTCAGCCATTACTGCTATAACCTGCTGGTAGGTGTTCAGTATTCAGTGAATGAGGTGTATGAGTG TGGGAAAGGATTGCATTGTAAGGTGAGAGATTTTCCAGCTATAAGGTGTTTGGAACTTGATGACTTGTGGGGAGATGTGG CTGCATTGGCTGTGATGTTTGTTGGATACAGAGTTGTGGCATATCTAGCTTTGAGGATGGGGCAGCCTCACTGA
Protein sequence (LotjaGi5g1v0269000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGPSGSGKTTLLTALAGRLTGKVSGTITYNGNPDPTCMKRRIGFVSQDDIVYPHLTVLETLTYTALLRLPNSLTREEKA EHAERVITELGLTRCRNSPIGGCMGVFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLRRLARAGR TVLTTIHQPSSRLYRMFDKVVVLSDGCPIYSGNAGRVMDYLESVGYMPAFNFVNPADFLLDLANGIVADVKHDDQIEHHE DQASVKQSLISSYKKNLYPLLKEEIHQNNSEQVAFTSGTARRSDNQWATSWWEQFKVLLKRGLQERRHESFSGLRIFQVL SVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYHLSSYYVARMVGDLPMELVL PTMFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPSFIAW LKYISFSHYCYNLLVGVQYSVNEVYECGKGLHCKVRDFPAIRCLELDDLWGDVAALAVMFVGYRVVAYLALRMGQPH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 138 | 138 | 1.9E-21 | ||
| Gene3D | 1 | 207 | 207 | 6.9E-52 | – | |
| SMART | 1 | 187 | 187 | 1.2E-4 | ||
| PANTHER | 1 | 554 | 554 | 0.0 | – | |
| Phobius | 1 | 313 | 313 | - | – | |
| PANTHER | 1 | 554 | 554 | 0.0 | – | |
| ProSiteProfiles | 2 | 210 | 209 | 13.179 | ||
| SUPERFAMILY | 2 | 204 | 203 | 1.06E-42 | ||
| ProSitePatterns | 110 | 124 | 15 | - | ||
| Pfam | 293 | 499 | 207 | 3.0E-40 | ||
| TMHMM | 311 | 333 | 23 | - | – | |
| Phobius | 314 | 332 | 19 | - | – | |
| Phobius | 333 | 343 | 11 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 344 | 366 | 23 | - | – | |
| Phobius | 367 | 385 | 19 | - | – | |
| TMHMM | 386 | 408 | 23 | - | – | |
| Phobius | 386 | 412 | 27 | - | – | |
| Phobius | 413 | 417 | 5 | - | – | |
| Phobius | 418 | 445 | 28 | - | – | |
| TMHMM | 423 | 445 | 23 | - | – | |
| Phobius | 446 | 451 | 6 | - | – | |
| TMHMM | 452 | 474 | 23 | - | – | |
| Phobius | 452 | 471 | 20 | - | – | |
| Phobius | 472 | 532 | 61 | - | – | |
| TMHMM | 529 | 551 | 23 | - | – | |
| Phobius | 533 | 551 | 19 | - | – | |
| Phobius | 552 | 557 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi5g1v0269000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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