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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0269000 |
| Transcript ID | LotjaGi5g1v0269000.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT3G25620.2 ABC-2 type transporter family protein; Swiss-Prot: sp|Q7XA72|AB21G_ARATH ABC transporter G family member 21; TrEMBL-Plants: tr|I1LCU7|I1LCU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0269000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58206526..58211222) extracted from Lotus japonicus Gifu genome v1.2.
AGACAATGAGACTGTTTGGATGCGGATAGAAAACATTTATTAAAATTTATTAAGTGTTTTTTATAGTAGATAAGCTCCAA AATGCTCTTGACTATGTAAATGTTCAAAATGGCCCAAAGAGGTACTTAGTTTTGCATGAAATGGATATGTTTGCCTATCT TTGAAATTGAGGCCATTTTTCGTTCCTGTGTCTTTGTTTTGTAGTTTGAAGACGTTTCATACAGCATAACCTTGCAAAGT CAAAAGAATAAAGGATGTGTTCTTCCAAAAGAGGCAAAAGTAACCAGAAGACTCCTCAGCGGCGTGACGGGGATAGCGAA ACCCGGCGAACTGACGGCAATGTTGGGCCCCTCAGGGAGCGGCAAGACCACCCTCCTCACCGCCCTCGCCGGAAGACTCA CTGGAAAAGTCTCTGGCACCATAACCTACAATGGAAACCCGGACCCCACCTGCATGAAGCGCAGGATCGGGTTCGTATCG CAAGACGACATCGTCTACCCTCATCTCACCGTGCTTGAGACGCTCACCTACACCGCCCTACTGAGGCTACCAAATAGCCT CACTAGGGAGGAGAAGGCAGAGCATGCAGAGAGGGTGATTACGGAGCTTGGATTAACACGATGCCGGAACAGCCCCATCG GCGGGTGCATGGGGGTTTTCCGGGGAATCTCCGGCGGGGAGAGGAAAAGGGTGAGCATTGGGCAGGAGATGTTGGTGAAC CCGAGTTTGCTGTTGCTGGATGAACCGACGTCCGGTCTGGACTCGACAACGGCTCAGCTTATCGTTTCGGTTCTCCGAAG GCTCGCCCGAGCTGGTCGAACCGTGCTTACCACCATTCACCAACCGTCGAGTCGGTTGTACCGGATGTTTGATAAGGTTG TGGTGCTTTCTGACGGGTGCCCCATTTATAGTGGTAATGCAGGTCGGGTCATGGATTATCTTGAGTCGGTTGGTTATATG CCCGCTTTCAACTTTGTCAACCCGGCTGATTTTCTTCTTGACCTTGCTAACGGTAAGTTATTTGTCAATAGAATTAGCCT AATTCACATCATAGATAAAATTCATATATATAAGTTTTCAATGAATATCTCATTTACATTTCTTTGTTAAACATATTCGC TTCAGTTGGTTAGAACGAGTCACTTCCCCATAGAAGGTTGTGTGTTCAATTCTCGCTGCCAATATGAGGGTAAGATTGGT GAGTGATTTGAAGTATCTCTATGAGCGGCCTATGGTCTTGGAAACATGGTCTGACCCGTGATTGTCACCAAAATCGAACA CACAACCCAAACTTTTATTCATAGATATTTATGTTTGATGTATACTATTTTGGTTAAACACCTAAAGTAAGATAAGAAGA AAAGATAGATAAATGATAGAGGACGCATCCATAATTTTATTATTGGGTCGCAACAAAATACGAAAAAATTTAATTTTTTT GGGATAAACTAAGGATTAAAAAATTGTATATAAAGTTACATAAAAAAAAAATCAAATTCTCAAGGTGTAGTGGCCCTTGT CTGCTCCTCTTAGATGCACTCTTGATTATAGATGTGATATATGATATGATGTATTAGATAATTAAAAATAAAGAGAAAAA CATTGATGCTTGTGGGTGTCGATATTGTTTTGTGATCTATCCATAAATCTATTTAAAAATTAAAAAGAAAAAGGTATGGT GGAATATATGTGATAAAGAAAATTGTAAAGTGAAATGTAATAAAAGATAAAGATATGATGGAGATTATATAAGAGATAAA GAAAGTTGTAAAGTAAATGTGATGGCCCAAATTTATTGTAGAGATATTATTAGATCCTCTTCCATCATCAAAATGCTTTC CCTTTCTCTATTCAAATCTTAATCATAAGTTTATGTACAATAATAGTCCGAGAACACAACACACTTCATCATCTACAAGT TGTTATCAGACTTTTTACCGAGATGCAATTGAAAAGATACAGTGAGCTGTGCAATTGAAAAAATGTTAAGGAGAAATAAG GTAAAGAAAAATCATGGCACATGTGGCAAATAGGATCAAGGTGGAAAAGCTGATGTGTAAATTATTAAATGTGAATTAAT AGGTGGACAAGCTGACGTGTAAATAATTAAGTGAGAATTAATCTCGGAGCGATACGTCACGAACTTGGCCTGTGAGAGCG ACACGTAATGCTAAAAGTTATTCTTTTTTAATATATTTTGATATTGATATTGATTATAATGTTTCATGTTTGTGAATTTT TATCAAGAGAATATTTATTCTCGTATTTCTACAATGAGAAGGGAAAGTTTGTGATTTTGTGCATGTCAACTTCATGAAAC AAAAGTGACCCCATGTGCGTGATATTTAGAGAGGGAGTTCAACACTTGTCGTTAATTGTAAGGTGATGGCTCATTTTCAA ATTTTTGATAATGGTGGTCAAAAGGGTTGAGCTTTTACTCTGAAAACCCATGCAAGGTGGCAAGAGATAATGCGTCATTA GCAGCAGTAAATTGAAAAGACACTGTTGCTAAAAGAAATCCCTCTTTGCCTTGGGCCAGTTTCACAACATGTGAGATTTC TTTTGTGTTGTCATAGATCAACACAAGAGAAACTTAACAAGTGTTGTAAGGTGCTTGGAATAATGTCACATATTGTCTTA CTTTCAAAAGAATTTTGTGATTGGTGGAACAATTTTCCTAACAACAATTAGTAGTATGTTGGTTCTACAGTGAAATGTTC TTGAATCACTTCTGATTAGAAACTATAATTCTTAGATTTTAAGTAAACATACATTACTAAAACATCCTTAGAGTGTCACA AGCCATGTATGACAATTCACAAGTTCATCCTAATTTTAAAATTAGATGAGAAATCAAACTCAGTTCCCTAGAATTGGACA AGATATCTGAAGACAAAAACAACAATAGTGGAAGCATCTTCAAGCATGGTTGATGATTGTCCTTGGATTTCTCTAATATT TGGTTATAGGCCTGAGACTTGGGTGAATTTGCATTAAATTTCTTGAGAGAGATGCTAGTAATCCTTCTCATTCATTAGAT TCTGGGGTTTTGCAGGCATAGTTGCTGATGTCAAACATGATGATCAGATAGAGCACCATGAGGATCAAGCTTCAGTCAAA CAGTCCCTAATTTCATCCTATAAGAAGAACTTATATCCTCTTCTTAAAGAAGAGATTCATCAAAACAACAGTGAGCAAGT AGCTTTCACATCAGGAACAGCTAGACGTGAGTGAAATTAATCTAGCAGCAATGGACAGAGTTATGTTATATTACACCATG GCTAAGTGTGTTCATTTTTCATTCTTGGCAGGTTCTGATAACCAATGGGCCACTAGCTGGTGGGAGCAGTTTAAGGTGCT TCTTAAAAGGGGTTTACAGGAAAGAAGGCATGAATCTTTCTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTGTCCATTC TCTCAGGACTTCTATGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTATTGTGAATCTATGTTCTGTTTTTCCTG GGTGAAAATTCAAAAATAAAATGAATACTTTATAAAGCAAGGTTATTAATTGAGCAACTCAAAATTTCAAGTAATAGAAG GATTAAATTCTTTTGTGCCAATGGTGTCTCAACTTCCTGTTCCACTAACAAAACGTTGTCATGTCGATTAAAAATTTGTA ACTACTTCACTCATGTTTTTTTTCAGTTGATATGACAAGATTTCATTATTGGACCGAAAGTTAAGACAAAATTTATAGAC AAAATATGTTAATCCGTAATTGGAATCGGATGAAGATCTTGTGCCCTCATTTGGGGTCTTCTTCCCTATCCAGTCCCACC GACCAAATTGAGTCATGTATGTATGAGTATGGAAATTATATCTTTACGCTGGTGTTTTAAGTGATATGACACAATTTGAT TGATCGGATAGAGAAAGAAACACCAAATGGGATAGAGGGTATCATTTCCTAGTTAATTTGCTTTAAAATTCAATAGAAAG TGGTGAATTGTAGTACTTATAACAACATAACTCTTGTAACAGGTAGGACTACTTTTCTTCTTCTCCATATTCTGGGGATT CTTCCCTCTCTTCAATGCAATCTTTGCATTCCCTCTCGAGAGGCCAATGCTAATAAAAGAAAGATCATCAGGAATGTACC ATCTCTCCTCCTACTATGTTGCTAGGATGGTGGGAGACTTACCAATGGAGCTTGTTCTTCCCACTATGTTTGTAACCATC ACCTACTGGATGGGTGGTCTCAAACCTTCACTAGTCACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTTCTGGT CTCTCAAGGAATAGGCCTTGCATTGGGGGCAATTCTCATGGATGTGAAGCAGGCCACAACACTAGCTTCAGTGACCATGC TCGTTTTTCTGTTGGCTGGTGGTTACTACATTCAGCAAATGCCTTCTTTTATAGCTTGGTTGAAGTACATTTCTTTCAGC CATTACTGCTATAACCTGCTGGTAGGTGTTCAGTATTCAGTGAATGAGGTGTATGAGTGTGGGAAAGGATTGCATTGTAA GGTGAGAGATTTTCCAGCTATAAGGTGTTTGGAACTTGATGACTTGTGGGGAGATGTGGCTGCATTGGCTGTGATGTTTG TTGGATACAGAGTTGTGGCATATCTAGCTTTGAGGATGGGGCAGCCTCACTGACTAA
CDS sequence (LotjaGi5g1v0269000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGGCCCCTCAGGGAGCGGCAAGACCACCCTCCTCACCGCCCTCGCCGGAAGACTCACTGGAAAAGTCTCTGGCAC CATAACCTACAATGGAAACCCGGACCCCACCTGCATGAAGCGCAGGATCGGGTTCGTATCGCAAGACGACATCGTCTACC CTCATCTCACCGTGCTTGAGACGCTCACCTACACCGCCCTACTGAGGCTACCAAATAGCCTCACTAGGGAGGAGAAGGCA GAGCATGCAGAGAGGGTGATTACGGAGCTTGGATTAACACGATGCCGGAACAGCCCCATCGGCGGGTGCATGGGGGTTTT CCGGGGAATCTCCGGCGGGGAGAGGAAAAGGGTGAGCATTGGGCAGGAGATGTTGGTGAACCCGAGTTTGCTGTTGCTGG ATGAACCGACGTCCGGTCTGGACTCGACAACGGCTCAGCTTATCGTTTCGGTTCTCCGAAGGCTCGCCCGAGCTGGTCGA ACCGTGCTTACCACCATTCACCAACCGTCGAGTCGGTTGTACCGGATGTTTGATAAGGTTGTGGTGCTTTCTGACGGGTG CCCCATTTATAGTGGTAATGCAGGTCGGGTCATGGATTATCTTGAGTCGGTTGGTTATATGCCCGCTTTCAACTTTGTCA ACCCGGCTGATTTTCTTCTTGACCTTGCTAACGGCATAGTTGCTGATGTCAAACATGATGATCAGATAGAGCACCATGAG GATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCCTATAAGAAGAACTTATATCCTCTTCTTAAAGAAGAGATTCATCA AAACAACAGTGAGCAAGTAGCTTTCACATCAGGAACAGCTAGACGTGGTTCTGATAACCAATGGGCCACTAGCTGGTGGG AGCAGTTTAAGGTGCTTCTTAAAAGGGGTTTACAGGAAAGAAGGCATGAATCTTTCTCTGGCTTAAGGATTTTCCAAGTC TTGTCTGTGTCCATTCTCTCAGGACTTCTATGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTAGGACTACTTTT CTTCTTCTCCATATTCTGGGGATTCTTCCCTCTCTTCAATGCAATCTTTGCATTCCCTCTCGAGAGGCCAATGCTAATAA AAGAAAGATCATCAGGAATGTACCATCTCTCCTCCTACTATGTTGCTAGGATGGTGGGAGACTTACCAATGGAGCTTGTT CTTCCCACTATGTTTGTAACCATCACCTACTGGATGGGTGGTCTCAAACCTTCACTAGTCACATTTGTGTTAACCCTCTT GATCATGCTTTTCAATGTTCTGGTCTCTCAAGGAATAGGCCTTGCATTGGGGGCAATTCTCATGGATGTGAAGCAGGCCA CAACACTAGCTTCAGTGACCATGCTCGTTTTTCTGTTGGCTGGTGGTTACTACATTCAGCAAATGCCTTCTTTTATAGCT TGGTTGAAGTACATTTCTTTCAGCCATTACTGCTATAACCTGCTGGTAGGTGTTCAGTATTCAGTGAATGAGGTGTATGA GTGTGGGAAAGGATTGCATTGTAAGGTGAGAGATTTTCCAGCTATAAGGTGTTTGGAACTTGATGACTTGTGGGGAGATG TGGCTGCATTGGCTGTGATGTTTGTTGGATACAGAGTTGTGGCATATCTAGCTTTGAGGATGGGGCAGCCTCACTGA
Protein sequence (LotjaGi5g1v0269000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGPSGSGKTTLLTALAGRLTGKVSGTITYNGNPDPTCMKRRIGFVSQDDIVYPHLTVLETLTYTALLRLPNSLTREEKA EHAERVITELGLTRCRNSPIGGCMGVFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLRRLARAGR TVLTTIHQPSSRLYRMFDKVVVLSDGCPIYSGNAGRVMDYLESVGYMPAFNFVNPADFLLDLANGIVADVKHDDQIEHHE DQASVKQSLISSYKKNLYPLLKEEIHQNNSEQVAFTSGTARRGSDNQWATSWWEQFKVLLKRGLQERRHESFSGLRIFQV LSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYHLSSYYVARMVGDLPMELV LPTMFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPSFIA WLKYISFSHYCYNLLVGVQYSVNEVYECGKGLHCKVRDFPAIRCLELDDLWGDVAALAVMFVGYRVVAYLALRMGQPH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 138 | 138 | 1.9E-21 | ||
| PANTHER | 1 | 555 | 555 | 0.0 | – | |
| SMART | 1 | 187 | 187 | 1.2E-4 | ||
| Gene3D | 1 | 207 | 207 | 6.9E-52 | – | |
| PANTHER | 1 | 555 | 555 | 0.0 | – | |
| Phobius | 1 | 314 | 314 | - | – | |
| ProSiteProfiles | 2 | 210 | 209 | 13.179 | ||
| SUPERFAMILY | 2 | 204 | 203 | 1.06E-42 | ||
| ProSitePatterns | 110 | 124 | 15 | - | ||
| Pfam | 294 | 500 | 207 | 3.0E-40 | ||
| TMHMM | 312 | 334 | 23 | - | – | |
| Phobius | 315 | 333 | 19 | - | – | |
| Phobius | 334 | 344 | 11 | - | – | |
| TMHMM | 344 | 366 | 23 | - | – | |
| Phobius | 345 | 367 | 23 | - | – | |
| Phobius | 368 | 386 | 19 | - | – | |
| Phobius | 387 | 413 | 27 | - | – | |
| TMHMM | 387 | 409 | 23 | - | – | |
| Phobius | 414 | 418 | 5 | - | – | |
| Phobius | 419 | 446 | 28 | - | – | |
| TMHMM | 424 | 446 | 23 | - | – | |
| Phobius | 447 | 452 | 6 | - | – | |
| TMHMM | 453 | 475 | 23 | - | – | |
| Phobius | 453 | 472 | 20 | - | – | |
| Phobius | 473 | 533 | 61 | - | – | |
| TMHMM | 530 | 552 | 23 | - | – | |
| Phobius | 534 | 552 | 19 | - | – | |
| Phobius | 553 | 558 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi5g1v0269000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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