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LotjaGi5g1v0294800.1

Overview

Field Value
Gene ID LotjaGi5g1v0294800
Transcript ID LotjaGi5g1v0294800.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine-protein kinase; TAIR: AT5G24080.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080; TrEMBL-Plants: tr|G7IDW1|G7IDW1_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi5g1v0294800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:61233994..61237602) extracted from Lotus japonicus Gifu genome v1.2.

ACATTTCATTTTCTTTCTCAATCCAAATAGAGACTCTCCTGTATCTCAAGATGCAATCTTGGAGCTTGACACCACTGGCA ACCTCGTCCTCACGGACGGAGACACCACCATATGGGCCTCAAACACCTCAAATTCTGATGTAGCAGCAGCTGTCATGACA GAATCCGGCAACTTCATCCTCCACACCACCAACAACCACCCTGCGTGGCAGAGTTTTTCTCAACCTTCTGATACACTCCT CCCCAACCAACCTCTCACAGTCTCTTCTGAACTAACATCATCAAAGTCTTCATCTCATGGTGGTAGCTACTATGCTCTCA AAATGCTTCAACAGCCAACTTCCTTAAACCTTGCCCTCACTTACAATCTGCCAGAAACCTACCAGGCTTTGGATGAACAC GAACCATTCACCAACTATTCCTACTGGCATGGCCCTGATATCTCCAACGTGACTGGAGAAGTTATAGCAGTTTTAGACCA AGCTGGGAGCTTTGGAATTGTGTATGGAGATTCATCTGATGGAGCAGTTTATGTGTACAAGAATGATGATGATGATGCAG GCTTGTCTTCTGCAATTCATAAATCTAATTCTACACCATTAACTGTTCTTAGGAGACTCACACTGGAGAAGAATGGCAAT TTGCGGCTATACCGTTGGGACGATGTGAATGGTTCAAGTCAGTGGGTCTCACAATGGGCTGCAGTTTCAAATCCATGTGA CATTGCTGGAATTTGTGGCAATGGGGTTTGTGAATTGGACAGAAGCAAGATAAAAGCCTCTTGCACTTGCTTGCCAGGAA CTTCTAAAGTTGGCAGAGATGGCCAGTGCTATGAGAATTCATCTCTTGTTGGAAAATGCAATGGCCAACATGAAAACCAG ACATCACTTAGGATGTCAATGGTGCAGCAAACTAACTACTATTTTTCTGAATTTTCTGTAATAGCTAACTATAGTGATGT TGATGTTGCTTCAGTGTCAAAATGTGGGGATGCTTGCTTATCAGATTGTGATTGTGTTGCTTCAGTTTATGGACTAAATG AGGAGAGACCTTACTGTTGGGTATTAAGGAGCTTAAGTTTTGGGGGTTTTGAGGATACTAGCTCTACTTTGTTTGTGAAG GTCAGAGCAAATGGTTCATGGATAGCAGGAGGGTCTAAATCTAATAGTAGCTCTTCTGATGGATTGGGGAGTGCTAAGGA AAAGGCTTTGATTATTCCCATTGTTCTGACCATGATAATCCTCATTGCTTTGCTGTGTTTATTACTGTATTACAGTGTTC ACAGAAAAAGAACTATGAGAAGAGAGATGGAAAGTTCCTTAATCTTATCAGGTGCTCCTATGAATTTCACCTACCGCGAT TTGCAAATCAGGACAAGCAACTTTTCACAGCTGCTAGGAACAGGTGAGTGGCTGAGTGCATGTTGGAAATCCTTCTAAAT TTGATTCTAAAAGTCAGAATCAATTATGGAGAGGAGCTTTTTTGAGTAGCTTCTGGATTTCATAATTGATTCTGAGAAAA AAGAAGTTAATCCCACATGCTATGAGTGTATCCTGAATGAAATTTTATAGCAAGGAAGTTATAGGGAGAGGAGTTTTGAT TTTTTTTGTTTTGTTTAAATTGTAGCTAACTTTACATAATTTGCAGGTGGGTTTGGAACTGTGTATAAAGGAAGCCTAGG AGATGGTACCCTAGTGGCAGTGAAGAAACTTGACAGGGTTTTGCCCCATGGAGAGAAAGAATTTATCACTGAAGTAAACA CCATTGGTTCAATGCATCATATGAATTTGGTTCGCCTATGTGGCTATTGTTCAGAGGGATCACAAAGGTATGAACTGTTT CTTGATAATCAAATTTATAATCTTTTTTTAACATCTTTAATGTATGAGTTTATCTATCAGATAACATCTTTTGTGGACTA TGATTATGGACCACCAATTTTTGTTATCAAGTGGATATTGCTTGGAATAACATTTAGCTCATTATAAGATCTCATTTTTT AACTGGCTCAAGAAAATGTTTGGCAGGCTTCTGGTATATGAGTTCATGAAGAATGGTTCCTTGGATAAATGGATCTTTCC TTCATATCAAGGCAGAGATAGATTGCTAGATTGGACAACTCGTTTTGAGATAGCTATAGCCACCGCACAAGGGATAGCAT ACTTTCATGAGCAGTGCAGGGATAGGATAATACACTGTGACATCAAACCAGAAAATATATTGTTAGATGAAAATTTTTGT CCTAAAGTTTCTGATTTTGGACTGGCCAAATTGATGAGAAGAGAGCACTCTCATGTGGTAACCATGATTAGAGGCACTAG AGGCTATTTGGCACCAGAATGGGTTAGTAATCGCCCTATAACTGTAAAAGCTGATGTTTACAGCTATGGGATGCTTCTTT TAGAAATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGATGCAGAAGACTTCTTCTATCCTGGCTGGGCTTACAAG GTATACATATGTTTCAGATAATTTATTAACTTTTCTGCCTTTTTTATTCATGTATGATCAACTTTAATATCATCTTTTTA GTTGTGGCAGATGACATCTTAATCAATTAAGTGTGTTTGAATACTACTTAGTGTGTGTTTTGGATACACTTTCAACTCAC ATTAGCACACATTCCAATGCCAAAAGGACACATTTTTTTCGAAGGAACAAAAGAGTTGGATTTGATGAAAGGACTTTCAT ATCCAAAGCAACATAAAGTGAAAGTACTTTTAACTCGATCCATAGAGAGAGTTTCACTCACTTTTTGTCTCGAAATGAGT GTTAACGTCTGTTTGCACTGGTGTCAACGGCTATCCAAAACATACCCTAATTCATTTGGGTTTTTCTTTTAATATTGGCG TCTTTTAAACTATAGAAAAATAGTAAACCCTCCATTTCGCCCCTAACATTTTCCACACACATCAGACTAGTGTATAACCT AAAGAAATTGCATATTTGGACCAAGCATATCATGATATCTATGATCTCAATCCTGTTAGGGACTAACATGACCGACAATA TCCTACGTTAGGTTCAAATATGTGATTTATTTAGATTCTACCTAGACTAATTTGGTGAACGTGAAAATATTAGGGATGAA ATTGAGGGTTTAGTAATGATAAGACCTTCTGTTCTATTCAACAGAGAGAGGCAGCTCCAAAAAGAAAATAACTCTTAACA AGAGACAGAAAATGATATACATTCAACTGCTTGGTAAATATATTGATTATATCATGTTTGGTTATTTTAGGAGATGACGA ATGGATCAGTAATCAAAGTGGCAGATAGAAGATTAAATGGTGCAGTTGATGAAGAAGAGCTAATGAGAGCTCTCAAAGCT GCCTTTTGGTGCATCCAAGATGAGATTTCGACGCGACCACCAATGGGGGAAGTGGTACGGATGCTGGAAGGTTCAATCAA CATTAACACGCCACCGATGCCGCAAACAGTGCTGGAGTTAATTGAGGAAGGTCTAGAGCATGTATACAAAGCTATGAAAA GAGAGTATAATCAGTTCAGCTCATTCACCATTACCAGCCATCTTACATCTCATGCCACATGTAGCAATTCATCAATGTCA CCAAGATAG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0294800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACAGAATCCGGCAACTTCATCCTCCACACCACCAACAACCACCCTGCGTGGCAGAGTTTTTCTCAACCTTCTGATAC ACTCCTCCCCAACCAACCTCTCACAGTCTCTTCTGAACTAACATCATCAAAGTCTTCATCTCATGGTGGTAGCTACTATG CTCTCAAAATGCTTCAACAGCCAACTTCCTTAAACCTTGCCCTCACTTACAATCTGCCAGAAACCTACCAGGCTTTGGAT GAACACGAACCATTCACCAACTATTCCTACTGGCATGGCCCTGATATCTCCAACGTGACTGGAGAAGTTATAGCAGTTTT AGACCAAGCTGGGAGCTTTGGAATTGTGTATGGAGATTCATCTGATGGAGCAGTTTATGTGTACAAGAATGATGATGATG ATGCAGGCTTGTCTTCTGCAATTCATAAATCTAATTCTACACCATTAACTGTTCTTAGGAGACTCACACTGGAGAAGAAT GGCAATTTGCGGCTATACCGTTGGGACGATGTGAATGGTTCAAGTCAGTGGGTCTCACAATGGGCTGCAGTTTCAAATCC ATGTGACATTGCTGGAATTTGTGGCAATGGGGTTTGTGAATTGGACAGAAGCAAGATAAAAGCCTCTTGCACTTGCTTGC CAGGAACTTCTAAAGTTGGCAGAGATGGCCAGTGCTATGAGAATTCATCTCTTGTTGGAAAATGCAATGGCCAACATGAA AACCAGACATCACTTAGGATGTCAATGGTGCAGCAAACTAACTACTATTTTTCTGAATTTTCTGTAATAGCTAACTATAG TGATGTTGATGTTGCTTCAGTGTCAAAATGTGGGGATGCTTGCTTATCAGATTGTGATTGTGTTGCTTCAGTTTATGGAC TAAATGAGGAGAGACCTTACTGTTGGGTATTAAGGAGCTTAAGTTTTGGGGGTTTTGAGGATACTAGCTCTACTTTGTTT GTGAAGGTCAGAGCAAATGGTTCATGGATAGCAGGAGGGTCTAAATCTAATAGTAGCTCTTCTGATGGATTGGGGAGTGC TAAGGAAAAGGCTTTGATTATTCCCATTGTTCTGACCATGATAATCCTCATTGCTTTGCTGTGTTTATTACTGTATTACA GTGTTCACAGAAAAAGAACTATGAGAAGAGAGATGGAAAGTTCCTTAATCTTATCAGGTGCTCCTATGAATTTCACCTAC CGCGATTTGCAAATCAGGACAAGCAACTTTTCACAGCTGCTAGGAACAGGTGGGTTTGGAACTGTGTATAAAGGAAGCCT AGGAGATGGTACCCTAGTGGCAGTGAAGAAACTTGACAGGGTTTTGCCCCATGGAGAGAAAGAATTTATCACTGAAGTAA ACACCATTGGTTCAATGCATCATATGAATTTGGTTCGCCTATGTGGCTATTGTTCAGAGGGATCACAAAGGCTTCTGGTA TATGAGTTCATGAAGAATGGTTCCTTGGATAAATGGATCTTTCCTTCATATCAAGGCAGAGATAGATTGCTAGATTGGAC AACTCGTTTTGAGATAGCTATAGCCACCGCACAAGGGATAGCATACTTTCATGAGCAGTGCAGGGATAGGATAATACACT GTGACATCAAACCAGAAAATATATTGTTAGATGAAAATTTTTGTCCTAAAGTTTCTGATTTTGGACTGGCCAAATTGATG AGAAGAGAGCACTCTCATGTGGTAACCATGATTAGAGGCACTAGAGGCTATTTGGCACCAGAATGGGTTAGTAATCGCCC TATAACTGTAAAAGCTGATGTTTACAGCTATGGGATGCTTCTTTTAGAAATCATTGGTGGCAGGAGAAATCTTGACATGT CCTTTGATGCAGAAGACTTCTTCTATCCTGGCTGGGCTTACAAGGAGATGACGAATGGATCAGTAATCAAAGTGGCAGAT AGAAGATTAAATGGTGCAGTTGATGAAGAAGAGCTAATGAGAGCTCTCAAAGCTGCCTTTTGGTGCATCCAAGATGAGAT TTCGACGCGACCACCAATGGGGGAAGTGGTACGGATGCTGGAAGGTTCAATCAACATTAACACGCCACCGATGCCGCAAA CAGTGCTGGAGTTAATTGAGGAAGGTCTAGAGCATGTATACAAAGCTATGAAAAGAGAGTATAATCAGTTCAGCTCATTC ACCATTACCAGCCATCTTACATCTCATGCCACATGTAGCAATTCATCAATGTCACCAAGATAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0294800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTESGNFILHTTNNHPAWQSFSQPSDTLLPNQPLTVSSELTSSKSSSHGGSYYALKMLQQPTSLNLALTYNLPETYQALD EHEPFTNYSYWHGPDISNVTGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDDDDAGLSSAIHKSNSTPLTVLRRLTLEKN GNLRLYRWDDVNGSSQWVSQWAAVSNPCDIAGICGNGVCELDRSKIKASCTCLPGTSKVGRDGQCYENSSLVGKCNGQHE NQTSLRMSMVQQTNYYFSEFSVIANYSDVDVASVSKCGDACLSDCDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLF VKVRANGSWIAGGSKSNSSSSDGLGSAKEKALIIPIVLTMIILIALLCLLLYYSVHRKRTMRREMESSLILSGAPMNFTY RDLQIRTSNFSQLLGTGGFGTVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSQRLLV YEFMKNGSLDKWIFPSYQGRDRLLDWTTRFEIAIATAQGIAYFHEQCRDRIIHCDIKPENILLDENFCPKVSDFGLAKLM RREHSHVVTMIRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFDAEDFFYPGWAYKEMTNGSVIKVAD RRLNGAVDEEELMRALKAAFWCIQDEISTRPPMGEVVRMLEGSININTPPMPQTVLELIEEGLEHVYKAMKREYNQFSSF TITSHLTSHATCSNSSMSPR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 351 351 - –
PIRSF
PIRSF000641
1 732 732 2.4E-196
IPR024171
SUPERFAMILY
SSF51110
1 36 36 2.36E-7
IPR036426
PANTHER
PTHR27009
89 707 619 3.4E-144 –
PANTHER
PTHR27009:SF63
89 707 619 3.4E-144 –
Pfam
PF00954
149 216 68 2.1E-8
IPR000858
Phobius
TRANSMEMBRANE
352 375 24 - –
TMHMM
TMhelix
353 375 23 - –
Gene3D
G3DSA:3.30.200.20
372 483 112 6.0E-32 –
Phobius
CYTOPLASMIC_DOMAIN
376 740 365 - –
SUPERFAMILY
SSF56112
386 681 296 2.29E-75
IPR011009
ProSiteProfiles
PS50011
408 684 277 35.241
IPR000719
SMART
SM00220
408 680 273 2.5E-25
IPR000719
Pfam
PF00069
411 611 201 1.2E-45
IPR000719
CDD
cd14066
414 682 269 1.66333E-89 –
ProSitePatterns
PS00107
414 437 24 -
IPR017441
Gene3D
G3DSA:1.10.510.10
484 689 206 1.2E-55 –
ProSitePatterns
PS00108
531 543 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of
GO:0048544
Biological process Recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.
Subterm of
Part of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0294800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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