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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0027300 |
| Transcript ID | LotjaGi6g1v0027300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230; TrEMBL-Plants: tr|A0A0S3S864|A0A0S3S864_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0027300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4841283..4844889) extracted from Lotus japonicus Gifu genome v1.2.
TCATGATGCACCATATACACTCATGACAGTGGCAGAAATTTAAAGTCATGTCAAATCAATTTCTTTTGGTCTCATATATA TATATTAATTAACATGAGAACGTGAAAAAGTTTCCCCGTGATAGTATCACGACCCTATAAGTTGTGAGCACCGGACAGCA GCAACCAACCCACAAAATTAAGTTCTTGCTCTCCAATCTAATTAACCATGTCCACTGTTAGCTTTTCACAATTTTCTATT GCCTTTCTTCTGTTCTTATCTACAACAACATTCCATAGTGGCATGTTCTGTACTGGTACAAATCTGCAGCATCGTTGCAA TGAGAGGGACCGTTCTTCACTACTGCAATTCAAACGTGGTGTCATAGACAATTCCAACAAGCTCTCCTCTTGGTCCAATG AAGAAGATTGTTGTGCATGGAAAGGAGTTCATTGTGACAACATCACAGGCAGAGTCACAAGACTTGATCTAAATCAACAC TACTTGCAAGGTGAAATCAACCTCTCTTTATTTGAAATTGAGTTCTTGAGCTACTTGGACTTGAGCATGAATTTCTTTAG TGGCCTAACTCTTCCACCTACCTTCAACCATAGTAAACCTGCTAACTTCTCTAATATTCAGTACCTGGACTTATCCTTCA ATGATGATTTTCACATGGACAATCTTCACTGGCTTTCAAAACTTTCTGCCTTGAAATTTCTCAACCTCAGCGAAATTAAC CTTGTAAATGAAACAAGCTGGCTTCAGTCCATGTCAATGCATCCTTCACTGTTAGAGCTAAGATTGGCAAGCTGTCAATT GACCAATATCAACCCATCCATCAAGTTTGTGAATTTTACTTCACTTGTGACTCTTGATCTCTCTGGAAATTCATTTCATT CTAGTTTACCTTATTGGTTGTTTAATCTCAGCAGTGATATCGCTCATGTTGACCTTAGCTTCAATTTTCTACAAGGTCAA ATACCCAAGAGCTTGCTAAGTCTTGGGAAGCTTAAATCTTTAAGGTTGCATAACAATGAACTCAATGGATCCATTCCAGA TTGGTTAGGGAAGCATGAAAATTTACAAAATCTGGTTCTATCTGAGAACTTGTTTCATGGCTCTATCCCTTCATCTCTAG GAAATCTCTCAACCTTGGTTGACTTGGGAATCAGCTCAGATTCCTTGAGTGGTAATCTTCCAACCAGTCTTGGACAACTC TTCAATTTGAAGAGTTTAAACATTGGAGGCAAATCCTTGTCAGGCGTTCTTTCTGAACAACATTTTTCCAATCTACACAA TTTGGAGTCACTCATCTTGACTTCACCTTTTGCATTTGAGTTGGATCCTGAATGGATTCCTCCCTTTCAATTGGAAGGAG TAGGTTTGATCAATACAATCCTAGGTCCTAATTTTCCAGCTTGGATATATACCCAAAAGTCACTAGACTTTCTTCAAGTT TCTAAATCAACTATTACATCCATAAATGGAGACAAATTTTGGAGATTTGTAGCCAATATTACCCAAGTCAAAATTACCAG CAACTTAATCAGTGCAGACTTAACAAACATCACCCTGAGCTCCAAGTTTTTATATCTGGACAACAATAGTTTCACTGGAA GGCTCCCACATATTTCTTCAAATGTCTTCTATTTGGGTTTGTCCCGCAATTCTCTCTTTGGACCCATTTCCCCTATGTTT TGCCAGAAACTGGGTAGGGAAAATAGCTTGGGTTATTTGGACATATCATTCAATCTCTTATCCGGATCTGTTCCTGATTG TTGGCAGTATTGGAGAGGTTTGTCTTTCCTTTTCTTGGAGAACAACAATCTAACTGGTGAACTCCCTCCATCCATGGGCT CATTAATTGATCTCATTGCACTGGATTTGCACAACAACAGCTTGTCTGGCAATTTTTCGGTGGATCTATCAAACACAACA AACTTGCAATTCATCAACCTTGGAGAAAACAATTTCTCTGGAACTGTACCACTGAAGCTTCCACATAGCATGGAAGTGAT GCTTTTGGGATCAAACCAGTTTGAAGGTAACATTCCACCAGAGCTGTGCACTCTCTCTTCACTGTTACAATTGGATCTTT TCCATAACAAACTTTCAGGGCATATTCCTTCATGCATAAGCAACATTACCGGCATGGGTGGAGCGAAAAAAACGAGCCAC TTTCAATTTCATGAATACAATGTGCATAACAAAGGCCTTGAGTTAGAGTATAGAGATTATGGACTATGGCGAAATCTTGA CCTTTCATCTAACAACTTATCAGGGGAAATCCCCCCAGAAGTTTTCAACCTTGTTCAGTTAAAATCCTTGAACTTGTCTC GAAATCATTTAACAGGAAAGATACCAAGAGAGATTGGACACATGAAAAACTTGGAATCTCTTGATCTGTCCAGCAACAAA CTCTTTGGAGAAATTCCTGTTACAATGTCTACCTTGTCTTTCTTGGGCTTCTTGAATCTTTCAAACAATGGATTGGTTGA ACAAATCCCAATAGGGACTCAGCTTCAGAGTTTTGATGCCTCCTGCTATGCTGGAAATCCTAAACTTTGTGGAGTTCCTC TGCCAAAAAGCTGCATAGAAGGAGAAGGAGACAATGGTGATGATGATGAATCAAAGCAACATGGAGGAAACAATGATGAT AATGCTTTTCAAAATTCACTCTACCTTGGTTTGGGTGTTGGTTTTGCAGTGGGATTTTGGGGGGCTTGTGGTTCTCTATT CTTAAACAGGGCTTGGAGGCATGCATATTTTCGATTCCTTAATCATGTTGTAGACCAACTTTATGTGTATGTGGCCCTCA AATTAAAGCTTAACCAATTTAGTGGATCACCAAGAAGGCAAGAACTTCCAACTGATCAAGTAAGTAAAAATATAATTATG TTCTTTGTCGGTACTTTTATTAGGACATGATCTATATCTTCTTTTCATGTGATATGTCACCACCATATTACACATGATGA TCATCCGCCCATTTTAGTTTGTGTTTGAATTTCCGTTTAACTTAATGTCAAATCTGGTGAAATTCTACTTCTTCGTTTAT GTACTGGGGTCTGTGTTTTTTTGTTTGAGTCACCAAACACTAAAACATTGTTAATGAGTTGATAAAGTATTTGTAATGTA AACCATATTATATCTTCTTTTTCTTTAATTTTTTGGACTAGTTTGTTTAGGCTCTTGAAGTATGGTTTTGCAGTTAAAAA TGGATGTATGCAGTTTGTTTTTCCTTTTATAGTTTCATTTGACTAATTTTGCAGACCTTCACACAACGCTTCTCAAGTAA TTAAGAGTGCATCCCATATTTTTATGGATAGCTTGAAGATTCAAAGCATTGGTATGTATCGGGGACTATATTCAAATTAG AAGATAGAATGAGACCTTTGTCAAGTTGCTGTGGCATTTATGATATGTATTAGTTCTGAATTTAATATGGTATAGATTTT GGACCTGTTAAGGAAAGCGTGTAACCATTCCATATTTCATGTACTGGCCATATAAATAACATGATACTAGTATTGATCTT GCGCCATGCACGGATGAAATAATAATATTTTCCAAGGTTTGATACTAGTATTAATCAGCTTAGTGTATTACTTTTGCATG AGTTTCG
CDS sequence (LotjaGi6g1v0027300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCACTGTTAGCTTTTCACAATTTTCTATTGCCTTTCTTCTGTTCTTATCTACAACAACATTCCATAGTGGCATGTT CTGTACTGGTACAAATCTGCAGCATCGTTGCAATGAGAGGGACCGTTCTTCACTACTGCAATTCAAACGTGGTGTCATAG ACAATTCCAACAAGCTCTCCTCTTGGTCCAATGAAGAAGATTGTTGTGCATGGAAAGGAGTTCATTGTGACAACATCACA GGCAGAGTCACAAGACTTGATCTAAATCAACACTACTTGCAAGGTGAAATCAACCTCTCTTTATTTGAAATTGAGTTCTT GAGCTACTTGGACTTGAGCATGAATTTCTTTAGTGGCCTAACTCTTCCACCTACCTTCAACCATAGTAAACCTGCTAACT TCTCTAATATTCAGTACCTGGACTTATCCTTCAATGATGATTTTCACATGGACAATCTTCACTGGCTTTCAAAACTTTCT GCCTTGAAATTTCTCAACCTCAGCGAAATTAACCTTGTAAATGAAACAAGCTGGCTTCAGTCCATGTCAATGCATCCTTC ACTGTTAGAGCTAAGATTGGCAAGCTGTCAATTGACCAATATCAACCCATCCATCAAGTTTGTGAATTTTACTTCACTTG TGACTCTTGATCTCTCTGGAAATTCATTTCATTCTAGTTTACCTTATTGGTTGTTTAATCTCAGCAGTGATATCGCTCAT GTTGACCTTAGCTTCAATTTTCTACAAGGTCAAATACCCAAGAGCTTGCTAAGTCTTGGGAAGCTTAAATCTTTAAGGTT GCATAACAATGAACTCAATGGATCCATTCCAGATTGGTTAGGGAAGCATGAAAATTTACAAAATCTGGTTCTATCTGAGA ACTTGTTTCATGGCTCTATCCCTTCATCTCTAGGAAATCTCTCAACCTTGGTTGACTTGGGAATCAGCTCAGATTCCTTG AGTGGTAATCTTCCAACCAGTCTTGGACAACTCTTCAATTTGAAGAGTTTAAACATTGGAGGCAAATCCTTGTCAGGCGT TCTTTCTGAACAACATTTTTCCAATCTACACAATTTGGAGTCACTCATCTTGACTTCACCTTTTGCATTTGAGTTGGATC CTGAATGGATTCCTCCCTTTCAATTGGAAGGAGTAGGTTTGATCAATACAATCCTAGGTCCTAATTTTCCAGCTTGGATA TATACCCAAAAGTCACTAGACTTTCTTCAAGTTTCTAAATCAACTATTACATCCATAAATGGAGACAAATTTTGGAGATT TGTAGCCAATATTACCCAAGTCAAAATTACCAGCAACTTAATCAGTGCAGACTTAACAAACATCACCCTGAGCTCCAAGT TTTTATATCTGGACAACAATAGTTTCACTGGAAGGCTCCCACATATTTCTTCAAATGTCTTCTATTTGGGTTTGTCCCGC AATTCTCTCTTTGGACCCATTTCCCCTATGTTTTGCCAGAAACTGGGTAGGGAAAATAGCTTGGGTTATTTGGACATATC ATTCAATCTCTTATCCGGATCTGTTCCTGATTGTTGGCAGTATTGGAGAGGTTTGTCTTTCCTTTTCTTGGAGAACAACA ATCTAACTGGTGAACTCCCTCCATCCATGGGCTCATTAATTGATCTCATTGCACTGGATTTGCACAACAACAGCTTGTCT GGCAATTTTTCGGTGGATCTATCAAACACAACAAACTTGCAATTCATCAACCTTGGAGAAAACAATTTCTCTGGAACTGT ACCACTGAAGCTTCCACATAGCATGGAAGTGATGCTTTTGGGATCAAACCAGTTTGAAGGTAACATTCCACCAGAGCTGT GCACTCTCTCTTCACTGTTACAATTGGATCTTTTCCATAACAAACTTTCAGGGCATATTCCTTCATGCATAAGCAACATT ACCGGCATGGGTGGAGCGAAAAAAACGAGCCACTTTCAATTTCATGAATACAATGTGCATAACAAAGGCCTTGAGTTAGA GTATAGAGATTATGGACTATGGCGAAATCTTGACCTTTCATCTAACAACTTATCAGGGGAAATCCCCCCAGAAGTTTTCA ACCTTGTTCAGTTAAAATCCTTGAACTTGTCTCGAAATCATTTAACAGGAAAGATACCAAGAGAGATTGGACACATGAAA AACTTGGAATCTCTTGATCTGTCCAGCAACAAACTCTTTGGAGAAATTCCTGTTACAATGTCTACCTTGTCTTTCTTGGG CTTCTTGAATCTTTCAAACAATGGATTGGTTGAACAAATCCCAATAGGGACTCAGCTTCAGAGTTTTGATGCCTCCTGCT ATGCTGGAAATCCTAAACTTTGTGGAGTTCCTCTGCCAAAAAGCTGCATAGAAGGAGAAGGAGACAATGGTGATGATGAT GAATCAAAGCAACATGGAGGAAACAATGATGATAATGCTTTTCAAAATTCACTCTACCTTGGTTTGGGTGTTGGTTTTGC AGTGGGATTTTGGGGGGCTTGTGGTTCTCTATTCTTAAACAGGGCTTGGAGGCATGCATATTTTCGATTCCTTAATCATG TTGTAGACCAACTTTATGTGTATGTGGCCCTCAAATTAAAGCTTAACCAATTTAGTGGATCACCAAGAAGGCAAGAACTT CCAACTGATCAAACCTTCACACAACGCTTCTCAAGTAATTAA
Protein sequence (LotjaGi6g1v0027300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTVSFSQFSIAFLLFLSTTTFHSGMFCTGTNLQHRCNERDRSSLLQFKRGVIDNSNKLSSWSNEEDCCAWKGVHCDNIT GRVTRLDLNQHYLQGEINLSLFEIEFLSYLDLSMNFFSGLTLPPTFNHSKPANFSNIQYLDLSFNDDFHMDNLHWLSKLS ALKFLNLSEINLVNETSWLQSMSMHPSLLELRLASCQLTNINPSIKFVNFTSLVTLDLSGNSFHSSLPYWLFNLSSDIAH VDLSFNFLQGQIPKSLLSLGKLKSLRLHNNELNGSIPDWLGKHENLQNLVLSENLFHGSIPSSLGNLSTLVDLGISSDSL SGNLPTSLGQLFNLKSLNIGGKSLSGVLSEQHFSNLHNLESLILTSPFAFELDPEWIPPFQLEGVGLINTILGPNFPAWI YTQKSLDFLQVSKSTITSINGDKFWRFVANITQVKITSNLISADLTNITLSSKFLYLDNNSFTGRLPHISSNVFYLGLSR NSLFGPISPMFCQKLGRENSLGYLDISFNLLSGSVPDCWQYWRGLSFLFLENNNLTGELPPSMGSLIDLIALDLHNNSLS GNFSVDLSNTTNLQFINLGENNFSGTVPLKLPHSMEVMLLGSNQFEGNIPPELCTLSSLLQLDLFHNKLSGHIPSCISNI TGMGGAKKTSHFQFHEYNVHNKGLELEYRDYGLWRNLDLSSNNLSGEIPPEVFNLVQLKSLNLSRNHLTGKIPREIGHMK NLESLDLSSNKLFGEIPVTMSTLSFLGFLNLSNNGLVEQIPIGTQLQSFDASCYAGNPKLCGVPLPKSCIEGEGDNGDDD ESKQHGGNNDDNAFQNSLYLGLGVGFAVGFWGACGSLFLNRAWRHAYFRFLNHVVDQLYVYVALKLKLNQFSGSPRRQEL PTDQTFTQRFSSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 24 | 7 | - | – | |
| Phobius | 25 | 817 | 793 | - | – | |
| Gene3D | 33 | 126 | 94 | 9.6E-24 | ||
| PANTHER | 37 | 173 | 137 | 7.9E-152 | – | |
| PANTHER | 37 | 173 | 137 | 7.9E-152 | – | |
| Pfam | 39 | 77 | 39 | 4.7E-13 | ||
| SUPERFAMILY | 66 | 446 | 381 | 2.24E-35 | – | |
| Gene3D | 127 | 366 | 240 | 6.5E-45 | ||
| SMART | 210 | 234 | 25 | 16.0 | ||
| PANTHER | 236 | 852 | 617 | 7.9E-152 | – | |
| PANTHER | 236 | 852 | 617 | 7.9E-152 | – | |
| SMART | 259 | 283 | 25 | 8.4 | ||
| Gene3D | 367 | 792 | 426 | 5.2E-97 | ||
| SUPERFAMILY | 453 | 786 | 334 | 2.79E-52 | – | |
| SMART | 616 | 640 | 25 | 100.0 | ||
| Pfam | 675 | 732 | 58 | 1.5E-10 | ||
| SMART | 695 | 718 | 24 | 33.0 | ||
| PRINTS | 698 | 711 | 14 | 6.3E-5 | – | |
| SMART | 719 | 743 | 25 | 22.0 | ||
| PRINTS | 719 | 732 | 14 | 6.3E-5 | – | |
| TMHMM | 817 | 839 | 23 | - | – | |
| Phobius | 818 | 839 | 22 | - | – | |
| Phobius | 840 | 893 | 54 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0027300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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