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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0041500 |
| Transcript ID | LotjaGi6g1v0041500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | tRNA(His) guanylyltransferase; TAIR: AT2G32320.1 tRNAHis guanylyltransferase; Swiss-Prot: sp|F4ISV6|THG2_ARATH tRNA(His) guanylyltransferase 2; TrEMBL-Plants: tr|A0A0S3T8E1|A0A0S3T8E1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0041500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:7988171..7993713) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAATCTCTCACACACTTTGAAACGCTAAACCCTGCTGAAACTCGTCGCCGCAGCAGCCGCCGTGTCGTCTCTCTCGG GTTCATCATCATCATCGTCTCCAAACTCCAGGTTCGCGAGCTTCATTCTGCTCATTGCATAGTATTTGAAGTGAATGCCT AGTATTGAAGGTTTTTTTTTTTGTGTGTGAATGAATTGATGCAGGTTTTTATGAATAATGATGAGGACACCAAGTGTTTG ATGATTTTCCTGTGAGAAGAAAGAGACCACAGCTTTTGTGTGCAGTATGGCAAATAGTAAATATGAGTATGTCAAGTGTT TTGAACTTGAGGATGAGGTTTTGTTTCCCAATCTCATCCTAGTTTGGATCAGTGCCTGTAAACTTCATAAGCCTCATGAT GTAAATGTCTTGAAATTGATGAACTCTTGCGCTGTTGCGGTGCTTCAAGAGTATGCGGATGTGGTTTTTGCATATGGGTT CAGTGATGAGTACACTTTTGTTTTCAAGAAGACTTCCCAGTTCTACGAAAGGCGTGCTAGCAAAGTGTTATCGATCATCA CTTCTTTTTTCTCAGCAATATTTGTGAGAAAATGGGGGGAATTCTTCCCTCAGAAGAAACTGCAATCTCCTCCGTTTTTC CACGGGCGAGTCATAGCTTGTGCGTCCATAGAAGCCGTTCAAGCATATCTTTTTTGGAGGCAAAGTATCTGTCATTTGAA TAATCAACATGACCAATGCCTTTGGCGTCTTGTTGAACGCGGGATGAGTGAGGAGGAAGCGCTGGATTTCATCAATTGTG CTCAGAAACGCGACCTAAATGATCTTTTATTTGATGAGTTCCATGTCAATTACAATGAACTAGAGCCGATATTCCGACAA GGTTCCTGTATTTTAAAGACAGTGGTAGAGGATGTTGTGAAGTACGCAGATAATGGGGATCCAATTAAAAGGCACCGGAG AAAGATAATCACCGTGCATTCCAAGAAAATAGCAAGTAAAAGATTTTGGAATGAGCAGACTATTCTTGTGAAGGAACTTG GTTGTTTTGCGGAGGAGATTAACAATGTGAAACCAGAGTATGTGAGGTCCTTTGAATTTGATAGCAAGTTGATGCCATCT ACGTGGATTGTAGTTCGCATAGATGGATGCCACTTTCACAGATTTTCTGAGATGCACGACTTTGCAAAGCCAAATGATAT TAGAGCTCTTAACCTGATGAATTCTTGTGCAGTAGCTGTGGTGGAAGAGTTTAGGCAGGCCATAGTCTTTGCCTATGGGG TTAGTGATGAGTATAGCTTCATTCTTAAGCAATCCAGTGATATTTATCAAAGGAGAGCTAGTAAAATCATTTCAGCTATT GTGTCTTTCTTCACATCAACCTATGTGATGAGATGGAAAGATTTCTTCCCACAAAGTGAGTTAAAGTATCCTCCTTCTTT TGATGCACGAGTAGTTTGCTACCCATCAGCTAAAATTATAAGGGACTATCTTTCATGGAGGCAAGTGGATTGCCACATCA ACAATCAGTATAACACTTGTTTCTGGAAGCTTGTTGCATCTGGAAAAAGCAAAAGGGAAGCGCAGCATAGTTTGAAGGTG TTAGGAACCCGGTTTTCAGCAAGGAAATGTAGAAACAATATTAGATACTAGGAATAGAACTAGAAAATAGAGATGGAATT GCATAATATCACTGAACCCTCTGGTAGAAACCCAGAAGCAGTGCTGCAGAAGATTACAGGGAAAAGGAAAAACGAAAAGA TAGCAGAGGCAAATTAGAGAGTGCCTCTATTCTCTCCCAAGTCCCAAGCCTAAACCCAATTCAAGCCTAACCTCTCTCTC ACAATACACGCTTATATAGCCATTCTCACCTCAGCATTCTCTCTCTTTCACACTCCTAGCACCCTGAAGATACTGCCACA TCAGCTTGGCAGTTATCACTAGTGGGAATCAATTTTATTTCCCTTTCTACCCTTCCTAACAAATACCTTAGCAATACTAG GACTACTAATATCTGGGTTCCTATCATCTCTCCCTTCCTCAAAAACATCCTTGTCCTCAAGGATGGAAGTTGGAAACATT CCTTCATGGCTGCCAAGGACTCCCATGAGCTGTCAGAATCAGGTAGGGTCTTCCACTTCATAGGCACTTCCCTATCTCCC TGCTGTCCAGATCTTGAAATCAGTAGTTGTTCAAGTTCAGGTTGCAGTTCCCCCTCTTCATTTAAGCAAGACAGAAGAGG TTGACTCAGTAATACACCTCCTGAATCTCATTGTTTGAAACAGGATGTAGACCAAGTCGTTGCTGAAAAATAAGAACAAC CTCCAGGGTCCCATGTATTCATCTTGCATTCAATCGCAACAAGCAACCCAAGCAATAGAGTCTTAGCTGCTATCATATGT GTCCAGGACTTGCTAAAAATTTCCTCAGCAAAATCAGCTTGTGTGCAAGCATAGCAGACAGCCTGGGCAACAAGGTCAGA TGTCCTCACCCTTCTAGAGATGAACATATGGCTAGAGATCACCGGTTGTTGTTCAGTCTCTTCATTGGCCCTCTTGACAT CAAGTGTACTACAAGTCATTGTGGTAATAATGCAGACAGCTGTGTTCTTCATTCTTACTCTTACTGTAACTATGTCACCT TCCCCCTCAATGAGCTTCTGAATTTCCTGGGTCAACCTTCCGTATTCCAACGAGCAAATGACATAGGAGGGGTCCATGTG CTTCTCCATTGGAATGTTATTTGTGTTTTTAGCAACTGCTTTAACAACTCTCAATATCATGTAAATTACACAAGAGTCTA GTAAGCATGACTTAGAATCTTTCTGCCACTTCACATACCAAATTCCATCTGTGTTGTGAAAGGAAACAGCTTGTACCCCT TGCTTGATCATCTCATTAGGAGTAAGAGCTTTTAAAGTACTGCAGAATGGTATTTTAGATTGTACCTGGAGCTGTATTAT TGTTGGAAAATCCACATCTATACTCACTTCTACTGAGAGCCTTCTAATCCAGGGAAAACGCAAACCCGAACCAGTTGTGG CTACTTCAACAATAGCAATTTCAACCCGACATATCTGAAGTGTGAGAATCCATGAAGAATTCTTATTACACTTTTCAGGA GGATGAGGCAATTCCACCATGCCATTTTCAATTTCCCAGTAGAGTTGTGCTACCATCATGTTATCTTCTCCAGAAACCTC TAAAGGACCTCTTAGAACAGGTCTAGACCCAACCTTGCTATTAGTAAGTAATGATAAAATTAGATGTTGGGCTTCAATCA AATTTCCAAGTTCAGACAAGTTCAAAAAGCTTTGTCCACGAACTCCCAAGTTTGCATTAGAATGAATAAGAGATGAATCT TTGAGAACTTGTAGGTTGCTAGCCTCAAAGAAGGATATTTGAACAATTGAACCATGTTTAGCATCCATAAACATCTTGGG ATTCAACCATAGATGAACTATAACACAAGTACGAAGAACTCCACATATCTGATTCCCTTTTTGAGAAGGCTTATTTCTAT TTTCAGTTATTGGGCCACAATCTATTGATTCATATAATGGGCCCAAATTTTGTAACTTTCTCTCTATTTTGCCAAAAGCA ATCAGAAGTTTAAGAAGCAAATTACCTGTTGCAACACAGCTACTATCACGTTGGGCCAGGCCCATTATGCTGAGAGAAGG GTCCAATTCCTGTTTCACCCACTTTGCCCATGCACTTGCCTTCTGACGTCTAGAAACTTCTGCTATCTTCTCTCTCATTC TCGTCGCCGGTGTAGCTTTGTCCTCCGACCTCGCCGGCGCCGGCGTTGTGGCGTACGCCGCCGGATTACATCCACAGTCC AAGTACTCCGGTGGTTTTGGTGGTGGATGTTTTTGAGTTTGCTTCCATTTTGCTCCTCTGAGCGTCTCTTCAACCACCGC ATGACACGACTTATCTGGTGGTTGTGGTGGTGGCAAATTGGCCAATCCGCTTTCCGTTGCCTGCAGAGTATACAACCGTT GGTCGTAAACTGACCTTGTCCTCGTTATGAACATGGGCGTCGCCGATGTTAGCGCTGCCCCACGATATGATTGGTCTGGT GGTACTTGTTCGATCTTCTTCTCTTCCTGATTTATCATCTCCGGTGGTGGTGGTTGCTTGACACTTAGCATCACTCCCGC CGCCTCACCTCTTGATTCCTGAAGAGTGTCGCAGATCTGGAGTTTCGCAGCAATGGTCATCTCTTCCCTTGCAACGATGA TGTTCTCTGTCAGATCCTCTTCAGTTTCCTCATTCTCTGAAATCCAGTCACCTTCGAACCGTTCATCACCAGTGCAACGA AACTTGACCCATTCTTCACACCAATTTCTTCTCAGTTCCAGGTTTGTGGCTTTGGCTTTTCTGGTTTCATCCGTCTGTTT TTCTTCCTCCCCAGTATCTTGAACTGGATCTGGCAGAAACAAATCAGAATCTGGTTCGAATTTTCTGAGTAGAGCTATCA CAAAATCCATCCATGTTGCCCTCTGATTTCTTCTTTTCCAGTCGTTCCACCAAAGGAGAGCATCACGCGTCAATGCCTTC TCCGCCACTGAGAATTTCTTCTCCTCTGATATTCCCTTGGCCTCACAGTACTGCTCTACGGTGATGATCCATCCATAAGC CACTCTTCCATCAAATTCTGGAAACATCTTAGCAAATCAAAGGCTACCACAGCACCTAGATCGGTGCTCTGATACCAATG TTAGGAACCCGGTTTTCAGCAAGGAAATGTAGAAACAATATTAGATACTAGGAATAGAACTAGAAAATAGAGATGGAATT GCATAATATCACTGAACCCTCTGGTAGAAACCCAGAAGCAGTGCTGCAGAAGATTACAGGGAAAAGGAAAAACGAAAAGA TAGCAGAGGCAAATTAGAGAGTGCCTCTATTCTCTCCCAAGTCCCAAGCCTAAACCCAATTCAAGCCTAACCTCTCTCTC ACAATACACGCTTATATAGCCATTCTCACCTCAGCATTCTCTCTCTTTCACACTCCTAGCACCCTGAAGATACTGCCACA TCAGCTTGGCAGTTATCACTAGTGGGAATCAATTTTATTTCCCTTTCTACCCTTCCTAACAAATACCTTAGCAATACTAG GACTACTAATATCTGGGTTCCTATCAGAAGGGTGCTCAACTGCAAAAGAAAATTGAGGAATTGGGTATTCACTACAATGA GTTACCAATGATGTTCCGACATGGATCCTCGGTTTTCTGGGACAAGGTAGACAATGTAATCATTCACCAGGAGAATGATG GAGAGTCTTCTGAAAGTAATGTAAAGGTCATTGTAGAACATATTGACATCATTGGACCAGCCTTTTGGTCAGAACGCCCA GAGATCCTTGACTAAAAGCTATACATGAAGTGTTACATTGTATTTCCTAATGAAAGTATTTTTTTTTATTCTTGCTGCTC ATTTTTTCAAAGTTTTTTTTAACATTTTGGATTATATATTATAATATTTTCTTATTTAGTACACATGATACCGGGAAGTA CTATATACAATTTATCTTCGTGG
CDS sequence (LotjaGi6g1v0041500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAATAGTAAATATGAGTATGTCAAGTGTTTTGAACTTGAGGATGAGGTTTTGTTTCCCAATCTCATCCTAGTTTG GATCAGTGCCTGTAAACTTCATAAGCCTCATGATGTAAATGTCTTGAAATTGATGAACTCTTGCGCTGTTGCGGTGCTTC AAGAGTATGCGGATGTGGTTTTTGCATATGGGTTCAGTGATGAGTACACTTTTGTTTTCAAGAAGACTTCCCAGTTCTAC GAAAGGCGTGCTAGCAAAGTGTTATCGATCATCACTTCTTTTTTCTCAGCAATATTTGTGAGAAAATGGGGGGAATTCTT CCCTCAGAAGAAACTGCAATCTCCTCCGTTTTTCCACGGGCGAGTCATAGCTTGTGCGTCCATAGAAGCCGTTCAAGCAT ATCTTTTTTGGAGGCAAAGTATCTGTCATTTGAATAATCAACATGACCAATGCCTTTGGCGTCTTGTTGAACGCGGGATG AGTGAGGAGGAAGCGCTGGATTTCATCAATTGTGCTCAGAAACGCGACCTAAATGATCTTTTATTTGATGAGTTCCATGT CAATTACAATGAACTAGAGCCGATATTCCGACAAGGTTCCTGTATTTTAAAGACAGTGGTAGAGGATGTTGTGAAGTACG CAGATAATGGGGATCCAATTAAAAGGCACCGGAGAAAGATAATCACCGTGCATTCCAAGAAAATAGCAAGTAAAAGATTT TGGAATGAGCAGACTATTCTTGTGAAGGAACTTGGTTGTTTTGCGGAGGAGATTAACAATGTGAAACCAGAGTATGTGAG GTCCTTTGAATTTGATAGCAAGTTGATGCCATCTACGTGGATTGTAGTTCGCATAGATGGATGCCACTTTCACAGATTTT CTGAGATGCACGACTTTGCAAAGCCAAATGATATTAGAGCTCTTAACCTGATGAATTCTTGTGCAGTAGCTGTGGTGGAA GAGTTTAGGCAGGCCATAGTCTTTGCCTATGGGGTTAGTGATGAGTATAGCTTCATTCTTAAGCAATCCAGTGATATTTA TCAAAGGAGAGCTAGTAAAATCATTTCAGCTATTGTGTCTTTCTTCACATCAACCTATGTGATGAGATGGAAAGATTTCT TCCCACAAAGTGAGTTAAAGTATCCTCCTTCTTTTGATGCACGAGTAGTTTGCTACCCATCAGCTAAAATTATAAGGGAC TATCTTTCATGGAGGCAAGTGGATTGCCACATCAACAATCAGTATAACACTTGTTTCTGGAAGCTTGTTGCATCTGGAAA AAGCAAAAGGGAAGCGCAGCATAGTTTGAAGGTGTTAGGAACCCGGTTTTCAGCAAGGAAATGTAGAAACAATATTAGAT ACTAG
Protein sequence (LotjaGi6g1v0041500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANSKYEYVKCFELEDEVLFPNLILVWISACKLHKPHDVNVLKLMNSCAVAVLQEYADVVFAYGFSDEYTFVFKKTSQFY ERRASKVLSIITSFFSAIFVRKWGEFFPQKKLQSPPFFHGRVIACASIEAVQAYLFWRQSICHLNNQHDQCLWRLVERGM SEEEALDFINCAQKRDLNDLLFDEFHVNYNELEPIFRQGSCILKTVVEDVVKYADNGDPIKRHRRKIITVHSKKIASKRF WNEQTILVKELGCFAEEINNVKPEYVRSFEFDSKLMPSTWIVVRIDGCHFHRFSEMHDFAKPNDIRALNLMNSCAVAVVE EFRQAIVFAYGVSDEYSFILKQSSDIYQRRASKIISAIVSFFTSTYVMRWKDFFPQSELKYPPSFDARVVCYPSAKIIRD YLSWRQVDCHINNQYNTCFWKLVASGKSKREAQHSLKVLGTRFSARKCRNNIRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 247 | 247 | 5.9E-166 | – | |
| ProSiteProfiles | 1 | 31 | 31 | 5.0 | – | |
| Gene3D | 1 | 251 | 251 | 8.9E-73 | ||
| PANTHER | 1 | 247 | 247 | 5.9E-166 | ||
| Pfam | 6 | 124 | 119 | 1.8E-28 | ||
| Pfam | 130 | 227 | 98 | 4.4E-22 | ||
| Gene3D | 258 | 446 | 189 | 1.1E-83 | ||
| PANTHER | 259 | 437 | 179 | 5.9E-166 | ||
| PANTHER | 259 | 437 | 179 | 5.9E-166 | – | |
| Pfam | 264 | 393 | 130 | 4.4E-50 | ||
| Pfam | 397 | 437 | 41 | 1.1E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Biological process | TRNA modification | The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically. | ||
| Molecular function | TRNA guanylyltransferase activity | Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of a tRNA molecule; observed for His tRNAs. |
Expression pattern of LotjaGi6g1v0041500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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