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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0063500 |
| Transcript ID | LotjaGi6g1v0063500.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribulose bisphosphate carboxylase/oxygenase activase; TAIR: AT2G39730.2 rubisco activase; Swiss-Prot: sp|O98997|RCA_VIGRR Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic; TrEMBL-Plants: tr|A0A0S3RKS8|A0A0S3RKS8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0063500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:11727085..11732810) extracted from Lotus japonicus Gifu genome v1.2.
CTTATAGATTCGATAAGCTCTCCTGTTAGGTGGTGGGTTCTACAGAGGGTAGCTAAGATGGTTAGATGAGGTTGTTTAGA TGATGGAAGTTAATTAATTGTTGTTGGAAATTGGAATTTCGAATTAGATGTCGTATATCTTTTTATAATAATTGTGTGCC TTAAGGTATACCAGTCTCATGTTATAATATAGTACTCCTTTAGAAAATTGTAACGTTGCTTGGATAAATTACTAATACTA TGAATATGTATTTGCTGGTTCTTCTATAAGAACTTGATGAAAGATATATACATATATAATATAATCTTTAATATTTGTTA CATTGAATAAATTTGGGAAGTTTTGAATTTCCTCTAATGGTAGGATGAGGGAAATTAGGAATTCCTAGAGCCACATACCA CAGGTAATGGAGATAAGGAGAGAGCAGCAGAGAGAACAAGGAGCTTGTTTTCACAGTTGGGTCCATGGAACCCACCTTCT GGACCAAGAGTGATGGTGCTCCAATCCCTATTTATGAAAATTATATTAGACTTACCAAATTAAATTCTGTTTCTTTTTCA GTCATAATGCATACTAAATTTATCTCGACCTGACAATACTCGTCATAATTTCATCAAAACTGAAAATTGAATCTATTGGC TTGTCTTTATTAAACAGTACCTCAATTATTAGTATAATTGTTTGTCAATTTTTTTTGTATAATTATTGGTTACAAAACAT CAAATATTAACACTTATCTTTTTTATCCAAGACAAGATGATCCTCCTATCCATGTGTGGCAATAAACTCTCCTTAACACT GGTGGAGCTGGAAAAAGCTTCAATCCTAACCTTAAGGTCCATGTCCAAGACTAACAGTGACAGAGAATTGGCGGGCACCA TATGCCTGCCACGTGGCAGCATAGGTAATCTTCATTGTGTGGATGTCAGGGTTTTAAGACCAATCCTGTTGTTACACTCT TACCCATCAGCTAAATATAAGCCACCTGCTCTGCTCATAAACTTGCATTGAATTTGCTTGAAGAAAGTACCTCTCCTCTT TCTTTCAGTTCTTTGTACCACAACACCTTCATCAATGGCTGCCTCTGTTTCCACTATTGGAGCTGTCAAAACTCCAGTAT GTCATGCTTTTCCATATTTCCATCTTTGTTACACTTAGCACTTGTTTAATTACTATAGCCCTTAAGGTCTTATAATTTGA TATGCATGTTTAGATAGTTTAATATGGACCAACAAGGTTTTGGTAGTGATAAGCAGGCTAGACTCCAGTAAAAGTGAGAA CACAAGTTCGAAGTCTGAAAATGTTATTTGTTGGGAGGGACATCTGTAGTTTCCCGAATAGGTGGGGACACCCGTCAAAG ACAAAAAGAAAAAAAAAATTAGTTCAATAAGCCTTGTGTGTGTGTTTGAGAAATGACATGCCCAAATCAAGTGATTTAAA TTGTATTATTACTATGTTTTACTATAACAGCATATAGTACAGACCGAGTTCAAAGGATTGTTGCTATTAGGCTGGTATGA AGTGGCTTAACAATCTAGTAATGAATTTATAGATTCAATAGTAGAAATGATGCATGATATAAGATGTTGGATATTGAAAG TGTGTAAAAATCTAACAATGATTCAGAATATATATAGGGAATTGTTAAGTTTTTTTAGTTAAGCTTAATCCCACTTTTGC TCCCCTATTTTGGACTATGTGTAATTTCTCTTAGCTTTAGCTTTTGCTTCTGTCCAAACATGCATTTACTCCCCCAATAG TTTTCTAACAAATTTAGTCACTCAACTTTTCAATTGTTGCAAATCAAGTCTCTCTATCATTATAATTCTGCTTCAAACTT TCAAATTCTAGTTTTCTAAGAAAAATCTTCATAAATTGAATCAATTTAATCATCATAGACGCTACTGTGATGTATATTGC AGTTGAGCTTGAATGGTTCTGGAGCTGGAGCTTCAGTTCCCAGTTCAGCTTTCTTTGGCAGCAGCTTGAAGAAAGTTATC TCAAGGCTCCCCAACACCAAGGTTTCCAATGGAAGCTTCAAAATTGTTGCTGCAGAGATTGATGAGAGCAAGCAGACTGA CGGAGACAGATGGAGGGGTCTGGCCTACGATATTTCCGATGACCAGCAAGACATCACAAGAGGGAAGGGCATGGTTGACC CCCTCTTCCAAGCTCCACAGAATGCCGGAACTCACTATGCAGTCATGAGCTCTTATGAGTACATTAGCACCGGTCTTCGC CAGTGAGTAACACATGCTGTGAATTTTAACTCAAATTGTGTTGTTTGCTTTTGAATGATGAAGCTTCTTTTGAATTTTAA ACTTATTACGTGGTTATTATGGTGTTTCAGGTACAACTTTGACAACACCGAGGGTGGATTTTACATTGCTCCCGCTTTCA TGGACAAGCTTATTGTTCACATCACCAAGAACTTCTTGACCCTGCCCAACATCAAGGTATGTAATTAGCATACATGAATG AGTTAATGAACAAAACTGCAGTATGACTTTAGCAGAATTGGGTGAAACATTCAATACTTTCATTGTTTTTTGCAGGTTCC TCTCATTCTTGGTATCTGGGGGGGCAAAGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTCCAAAAGATGGGAATCA AGTGAGTACTTTCTCTACTAGGCCCTCTTAAATTTAACTCCATGCACCCTGCTAGTACATAGATATGAAGTATTGAACCT CACAACTTTGAAATTAAAACTCAACAACTGATACGTAATGTGTTCCAATGGAATAACATATTATATATGTTATGCTACAT AATCTGCTACAAGTGTTTAATGGCTAGACATAATGAGTGTATGTTATATCATATTGCCATATGATAGTTAGATTAAATTC AAAGAAAACAAAAAAGATAATGAAATATGATAAGACTATTAGAGTATGAGAGGGTGTCAAAGAAGATGCGAGAACTGTAT AACGACGGGCTTAAAAGATAAGACTAGTATAGTGCTCCAACACTACACATTGACCCAAAACCTTAAAGCAATGAGTCTGT GGGTATAACGAGATTCAAAGTGAATCTAGAAGAAAGAAATTGCAGAGAACTGCAGAAATTTTACTGAATGAATGAGTCTT TCATTACTTGCTCAACTCAGTTCTATGAGCTAATATACATGTACAAAATGTAACTAACAATGTGAAAGTAATGCTAACTA ACTAATATCAAACTTGATTAGTTAGATTACTACTCACTCTAATTAACAATTAACTCTATACTTAAGAGTAACAACTCACT TAATTGCTAACTATCGCCATCTTTTAATCAATGTTATGTTGAACTTATTACTCACATATATATATATGTATGTGTAAAAC AGTTTACATTGTCGGTGTATACTAATTAAATTCAACTTCTAATGTCTGTGCGATGTTGCAATTACATTCCAGCCCCATCA TGATGAGTGCTGGAGAGCTGGAAAGTGGAAATGCAGGAGAACCCGCGAAGTTGATCAGGCAGAGATACCGCGAAGCTGCT GATATAATCAGGAAGGGAAAGATGTGTGCTCTCTTCATCAACGATCTTGATGCAGGTGCAGGTCGTATGGGTGGAACCAC CCAGTACACTGTCAACAACCAGATGGTTAACGCCACCCTCATGAACATTGCTGATAACCCCACAAATGTGCAGCTCCCCG GCATGTACAACAAGGAAGACAACCCCCGTGTGCCCATCGTTGTCACCGGTAACGATTTCTCAACACTGTATGCTCCTCTC ATCCGTGACGGGCGTATGGAGAAGTTCTACTGGGCGCCTACAAGGGAAGACCGCATCGGTGTCTGCAAGGGGATTTTCCA AACTGACAATGTGTCTGAAGAGGCTGTTGTCACGATTGTTGACACCTTCCCTGGTCAATCCATCGGTAAGTACCCTGCAA CGTCAGCTTATTTTTACACAGAATCAATTCTAACACCCAGAAGCTAGTCAGAGAAGCTTCTACTAAGAATTGGTTTGATT TTAGAATCAATTATAGAAGAATTTCCAAATATGTATATGCGGTACTAACACTATACTGCCTTTTGTGGTGCTGTAGATTT CTTTGGTGCATTGAGGGCTAGAGTGTATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGATTTGATTGGAA AGAAGCTTGTGAACTCAAAGGAAGGACCTCCAGTATTTGAGCAGCCCAAGATGACCCTGGAGAAGCTCTTGGAGTATGGT AACATGCTTGTGCAAGAACAAGAGAATGTGAAGAGAGTCCAGTTGGCTGACAAGTACTTGAATGAAGCTGCTCTTGGTAA TGCTAATGACGATGCTATCAAGAGGGGAACTTTCTAAGCCTTCATTGGAGGTTTGCATCTAGCTTTATATCCCTCTAACT AGGACAATTATATTAAGTTCAAACAAAACTTGGTCTGAGATCTTGAGTTAATTGTTTTCTGTGCAGGCAAGTAAATATTC CCGTGAAGGTTGTAGTGTTCCAATGCCTCAACTTTGATCCAGGTGCTAGAAGTTGTGATGCAATCTTCTTGTAACATTCT TAGCTTTGTCAATGTATTGGGTGGAAGGAGAATGCCCAAGTTTGAATGTTTTTTTCATGTTGAACTGTCTTCATGTAAAA TTTTGTGTACAATGTTAAATTGAATTTGGTGTCTTTTTTTCCTGCCTATACTGGAGGTTTCTTTTCTACATTTAATTATG TTTGCCATGAGAAGATATCAAGTGAGTGCTAAGGATATGATGAATTTGGGGACAAAGTCTGAGTTCTGAGCTCAAGGACA TATTATATACACTCACCATTTTGATTCGAATTAATACCACCAGCCATCTCAGAGATTGGAGTGAGGATTGTGTGAAATGT GGTGGAGTAATGGTTGTGTGAATGGTGGTGGAGCGAGGGTTGAATTGTGTGAGCATTTATAGGCAAATGGATCTGAAGAA ACATTCAAAGAAGAAAAGGTTGTGTAAAGAATTCAACCTATAACCCTAGATCTACAAAGCTAATCCCAACTTCAAATCAA AATGTAAATGACAGATGCATAAAAATTGGATGAACTGAAGATGACAATGGGGAATGGTTGCAAACAGAGTACGAAATCTC TCAAAAAAGGCACATCTAATCAATGAAATCAGATAAACAATTCGAAAAAAGGACGAAATTAGGAGGAAACGTATGGGAAG AGCTAAACCACGTAATGGTGAGGTTCACAGAAGAACTGTTATAGAGGCTTACAACGCAATGGTTGATGGAGCGACTTGAT GGCCAACGTCGAGGAAGCCATGGGAAGGTGCCGAAGATCGTGGGAAGTAGATCTTTAGAGCCGAGTGACGTCGAACGCAG TTGGCACGGGGAAATCAGTGACGTTGCTACAGTTGGAGAAGCGAGAAATTGGGGAAAAAGGACGAAATTTACAGAGGAAG GGTGGCTGAAGGGACATGGGGTCGGTGCTTCCCCATGGAAACCGGGGAGCGGAGGCGGCGGCTCTGCCAACCTCACATGT TCGAGAAGAGAGAGAAACAGGTAGGGTTGTGTGATCTGTGATTATTTTATTCAACGGCCCAGATTAAAAGATGGAAAAAG CAGTAATAGATTTCAACTAAAAAAATAAAACTAAATTTGAAAAAGTCACAAAAGCAGTACACATGTCGAAATGCCATTGG TGGTTTCTTATGAATAGTAACTCGAGAATAAGATGTAGTAGATACA
CDS sequence (LotjaGi6g1v0063500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCCTCTGTTTCCACTATTGGAGCTGTCAAAACTCCATTGAGCTTGAATGGTTCTGGAGCTGGAGCTTCAGTTCC CAGTTCAGCTTTCTTTGGCAGCAGCTTGAAGAAAGTTATCTCAAGGCTCCCCAACACCAAGGTTTCCAATGGAAGCTTCA AAATTGTTGCTGCAGAGATTGATGAGAGCAAGCAGACTGACGGAGACAGATGGAGGGGTCTGGCCTACGATATTTCCGAT GACCAGCAAGACATCACAAGAGGGAAGGGCATGGTTGACCCCCTCTTCCAAGCTCCACAGAATGCCGGAACTCACTATGC AGTCATGAGCTCTTATGAGTACATTAGCACCGGTCTTCGCCAGTACAACTTTGACAACACCGAGGGTGGATTTTACATTG CTCCCGCTTTCATGGACAAGCTTATTGTTCACATCACCAAGAACTTCTTGACCCTGCCCAACATCAAGGTTCCTCTCATT CTTGGTATCTGGGGGGGCAAAGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTCCAAAAGATGGGAATCAACCCCAT CATGATGAGTGCTGGAGAGCTGGAAAGTGGAAATGCAGGAGAACCCGCGAAGTTGATCAGGCAGAGATACCGCGAAGCTG CTGATATAATCAGGAAGGGAAAGATGTGTGCTCTCTTCATCAACGATCTTGATGCAGGTGCAGGTCGTATGGGTGGAACC ACCCAGTACACTGTCAACAACCAGATGGTTAACGCCACCCTCATGAACATTGCTGATAACCCCACAAATGTGCAGCTCCC CGGCATGTACAACAAGGAAGACAACCCCCGTGTGCCCATCGTTGTCACCGGTAACGATTTCTCAACACTGTATGCTCCTC TCATCCGTGACGGGCGTATGGAGAAGTTCTACTGGGCGCCTACAAGGGAAGACCGCATCGGTGTCTGCAAGGGGATTTTC CAAACTGACAATGTGTCTGAAGAGGCTGTTGTCACGATTGTTGACACCTTCCCTGGTCAATCCATCGATTTCTTTGGTGC ATTGAGGGCTAGAGTGTATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGATTTGATTGGAAAGAAGCTTG TGAACTCAAAGGAAGGACCTCCAGTATTTGAGCAGCCCAAGATGACCCTGGAGAAGCTCTTGGAGTATGGTAACATGCTT GTGCAAGAACAAGAGAATGTGAAGAGAGTCCAGTTGGCTGACAAGTACTTGAATGAAGCTGCTCTTGGTAATGCTAATGA CGATGCTATCAAGAGGGGAACTTTCTAA
Protein sequence (LotjaGi6g1v0063500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASVSTIGAVKTPLSLNGSGAGASVPSSAFFGSSLKKVISRLPNTKVSNGSFKIVAAEIDESKQTDGDRWRGLAYDISD DQQDITRGKGMVDPLFQAPQNAGTHYAVMSSYEYISTGLRQYNFDNTEGGFYIAPAFMDKLIVHITKNFLTLPNIKVPLI LGIWGGKGQGKSFQCELVFQKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRMGGT TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIF QTDNVSEEAVVTIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDLIGKKLVNSKEGPPVFEQPKMTLEKLLEYGNML VQEQENVKRVQLADKYLNEAALGNANDDAIKRGTF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 435 | 435 | 4.6E-270 | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 435 | 435 | 4.6E-270 | – | |
| Gene3D | 124 | 307 | 184 | 1.9E-41 | – | |
| SUPERFAMILY | 141 | 339 | 199 | 1.52E-20 | ||
| Pfam | 163 | 304 | 142 | 4.4E-14 | ||
| Gene3D | 308 | 420 | 113 | 4.5E-48 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi6g1v0063500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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