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LotjaGi6g1v0095400.2

Overview

Field Value
Gene ID LotjaGi6g1v0095400
Transcript ID LotjaGi6g1v0095400.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Dual specificity protein phosphatase, putative; TAIR: AT3G55270.1 mitogen-activated protein kinase phosphatase 1; Swiss-Prot: sp|Q9C5S1|MKP1_ARATH Protein-tyrosine-phosphatase MKP1; TrEMBL-Plants: tr|V7D1Y7|V7D1Y7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0095400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:20568908..20573639) extracted from Lotus japonicus Gifu genome v1.2.

GACCGAACAAAAAAATAAAATTATTCATATTGATGGAGACTCTCCTTAAACAAAAGGGCAGGATTAATCCTAGAATTAAA ATAATGATTCTAGAATTCAATCTCAAATATAAATAATATTCAACCATAATTACAATATGCTTGCCCCCATAACCAATCAT ATAACAACTTGCTAGTGCTCCTCCTACTAACCTAACCTAATAGTCAAGAAGAGGAGTGCTAGTCAAGAAAGAGCAACCAA AAATGAAAATGAAAACGTGCCCATCATGACGTGGCACTTTGACGCGTTCCCTCGTGCTCTCAGGGTGAGACCATGACTGT GGATAATAGTGAGAATTAAATTCCTAGGTGGCATGCAATTGCAAAGGCAAAACAACTACTTGGTGTGCTGCTATGGGGTC CACTGAAAAACCAAAGCAAATATAACACACACACACTCTTTGCTGTGTGATAATAGACAATAGACAGGGTCGTATGGTAT GGTGATGAAGAAGAAGATGATGATGATCTCATTCTCATGATCCTAAATTTGTTGTTCTTTCATTTCTAGAGGGCGAGATC AGCCATTTTCTACTTCTGGAACCGGCTTTTGCTGGCATATTCTTGTTTGAAAATTTCCAATTTTCTTCACTTTTTTTTAT CAACACCGAAGAAAGAGTCATAGTCAGAGACATGGACGGAGACAGAGTCAAGTGTTTTAGGTGGGAATATAGAACACGAG TCGGTAGACTCAAAACTGCAAATACCTTCCCATTTACCACAGAATTTTGAACCCGTTTACCTGAGCTAGCTATGTCTTTG CTTTTGTGTTTTTTTATTCAATCTCTCTCTCTCTGAACTCAAGAGTGAGTGAGCAATACAATACAATACAATAGCATTAG CAACAAAAATGAAATGCTTTGATTGATTGATTGATGGGTGTGGGTCAAAATTCTGTACTTTTCATCTCACAGCATACCCT TTTGGCGATATGATAAGGGAAGAAGGGAAGAACATGGAGAAACCCTCTGCCGGTGTGGTGGGTCGGAAAACATATTCTCG CTCTGTTTCATGGACTGATGGATCACCGAGTCGCCGGAAGCCACCACCGCCGTCACAACCACCTTCTTCAAACTCAAGTA ACAAACCACCACGACCGTTTCTACCACCGCTTCAGCCACTCTCAATCAGCAAGCGCAGCGCGGAGGAATGGCCTAGTGCA GGATCTGACGATCTCGGAGTTTGGCCTCTTCCACAAACCCCAAGAGGGACCTCCATCAATGAATCCACCAATGATTTTCA GTTCAAGAGGGACAAGTTGGCCTTCTTCGACAAAGAGTGTTCCAGAATCGCCGACCATGTCTACTTAGGGAGCGACACGG TGGCCAAGAACCACCAACTCCTCCGCCAAAACGGAATCACCCACGTCCTCAACTGTGTCGGGTTCGTTTGTCCGGAGTAT TTCAAGAGCGATTTTGTCTACAAGACGCTGTGGTTGCACGACAGCCCCACTGAGGACATCACGAGTATCCTCTATGATGT GTTTGATTACTTTGAGGATGTTCGAGAGCAAGGTGGGCGTGTTCTTGTTCATTGCTGCCAGGGGATTTCTCGATCAACTG CTTTGGTGATTGCTTACCTCATGTGGAGGAAGGGGCAGAGCTTTGAAGATGCGTTTCAGTTTGTGAAGAGTGCGAGGGCT GTGACTAATCCCAACATGGGTTTTGCTTGTCAACTCTTGCAGTGTCAGAAACGGGTGCACGCTATGCCGGCGAGTCCGAA TTCGGTTGTTAGGATGTACCGGATGGCTCCTCACTCGCCTTATGACCCTCTTCATCTAGTTCCTAAAATGGTGAACCAGC CTGGTGCACGAGCTCTTGACTCTCGCGGGGCCTTTATTGTCCATGTTCCGTCGGCTATTTATGTTTGGAATGGGAAACAT AGTAACTCGGTGATGGCGTGCAATGCGAGGAGTGCGGCGTTTCAGGTCATCCGTTATGAGAGGGCGAACGGTCCAATTCA GAGCATCCATGAAGATGAAGAACCACCTGAGTTCTGGGTTGCTCTGTCTGATGAGCAACGATTATCGGGTGGTCTTGACA AAGCGGAGGCCATGGAGGAAGAACCAGTGTTGCCTTCTGAAAGCATGGAGATTGATCATAGAAAAGTTGATGCATATGAT TTGGATTTTGAGATTTTCGACAAGGCGCTTTCTGGTGGGGTTGTTCCACCCTTTTCTGTGGCTAATGTTGAATCAGAAAC TTGCCTTCCGGCTAGAGAACATGGCTGGGGAATACTGAGGCAGAGGTTTGCCAGTGGTGTTATGAAAGATTTGCTCACAT CCCCTAAATGGACCTGTGATGCAATCTCATCCAGTGATCATCAATCCAGAGTTGTCGTGGAAGAAGAAAACCAAGATCTT GTAGCTGGCCCTTTGTCTCCATCATCATCAAGTCAACCATGTGGTTCACCAGATTCCTTTGAATGTTCTCCAGATCACAA CTTAGGAAGTCCTAAAGATGTCGTTGAAGTCACGGATTTCTCTGTTCTTGGTGTTGCTTCTTCACTACCATTATCCCCCG CCGGCATATCAAGCCCTTTTCCTTCTTTTCTAAGCAGCAACAACAACAGCCCCAAATTCTATTCCAAGTCACCAACACTT TCGCCTTCAAGTTCTGACTACGCAAGTTCTTTCACATTCTCACCTTCATCTACCAATTGGTCGGACTTATCATTCGTCTC TTCTCGGCAGCCATCACCATCTGGAATAGAACCAACTGAACCATTCCATGTTAAAGACCTATTTTTCTCAGGAACTTCAT CTTTATTTCACAAAGAAGTGGTCTCTTCACCTTCAGAATCATTTTCCGTTAATCACACCTTGGGAGGGGCAAACTCCAAT TTGCCACTAAAAGGGTCTTCTCTCTCCATCGCAGAGCGCAGAGGGAGCAATCCACCACCGCGGATGTTGCTATCCTCGGT CAATGAATCCTCTCATGTCCACAGGAACCTGGTAAGAACACAATCATTCTCTTTGCCTGACTTAGTAGATGATAATGTGA AGGATGATAACTGCAAACAATCAGATCATGAAAACAATGGAAAATGGATAATAGCAGATGATGCTATCATTAGTTCCAGT GTTCAGCCAGTGAATAAGATTAGTGAGAAAGAGAATCATGGTAGCATGTTATGGAATATGATGGCTGAGCTTGAATTAGA GGACAACGTTATGAACTGAGCTGAGCCCAAATTGGGCACTATGGATGTAAATTTGCACTCACGCTCTGCCTATTTGGTGC ATGCTCAAAAACAGAATGCCTCACGCTAATAGCAGTTGAAGTGCATTATTGTTGAATTTAAGTGGAAATGTAATCTATCA CTGTTTTCCCCGTAGTTAATGTGCACCACCAGTACAGTATGAAACTCATCAAGCACTAGTATTAAAATTGATGTGTACAA TTTATGTTTTGCAGGAAATAACAGCAGAAATAGCTTAGTGTTATAGAATGTTAAATCATCCATCATTAGTAACTGCTTCC ATTAATAAACAAAATGAAGCTTCAGAACCATGAATGACTCCATTCAAACCGCATGGTTTATGTGCCTATGGCCACAGTCA GCTATTACTGTGTACATACAATACCAATTCAAACCACATCAATAAGTTCTGTTAAAGCTAGCATTTTTGTCGATAATCAT AGCTCTGTTTTGGCACTTACGATGCGGAACATCATGTCTCCAGCAGTTGATTCAATTTTCTGCTTGGTTTTCAGGAGGAC CGCCCCTAATAACATTCAAAAGATTTTCCCCAAAATATTTGCCCATTTCTATACTGAAATGAGGACATGAAGCATGCATT GCAGATGGTAATGTTGGTAATTTGTTCATATGTACCATAAAACATGTAATCTGGGGAAAAGTGTCACAAAATAGATATAT ACAGCCCAAGGGTAGATTTGCTTCTTAAAGTTGATTCTGTGACCTTAAACGTGCCATTGTGGGACCCAGCGCACTGCCTC TCATGGCCCTGTAGGACCATGACCGTGTGCCTGTGGTCTCTTCTTTGGTCCAGCCATTCTCCTGAGAAAGCTTGGCCTTC TTTGCATTTAATGCCTCGTTAATTTCATCCCAGACGCTTACTCCACCATTTTCTGTAAAGAGATCCACATGTAAGTTTAG TGTATCAAGATGTTTTCATGTTTCTAAACACCACACACTCCAAGAATGGTAAAATATACATTACCTTTAGCAGGTTTTTC ATCAGTGCTGCCGTTAGTTGCTTTTGGTGGATTGACCAAAGCATCAGTAGAAGCAACTGCAGTTGCGGAATTAGAGTTGG CATGCTTGACCATTCTAACATCAGCAAGGGATGTATACTCTACCTGTATGAGGAAAACATTTGTTCATTTTCATGCAAAT AAGCAGCAAAGTTTTAATTCTGTTTTCAATAAGGTATTAATGCTACGCCAAGATAGAGATTAGAGAGTAAGATAAAATTA AGTAAATATATGAACTCGCACCAAAATGTAAAGAGTGCAAAATTTCTAGAGATTAGTTTTATACAAGGCTTAATTGCAAT TTTGGTCCCCGACGTTTACCAATGCCACGATTTTAGTCTCCCACCTAATTTAATTACATGGATGGTCCCCGACGTTGTAG GCTGTGTGCAACGTTAGTCCTACCGTTTATTTCTTAATGGATGAGGTTTACGTGGACGTCCAGTTGGAGAGAGAAAGGAG GTATGAGGAGAG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0095400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATAAGGGAAGAAGGGAAGAACATGGAGAAACCCTCTGCCGGTGTGGTGGGTCGGAAAACATATTCTCGCTCTGTTTC ATGGACTGATGGATCACCGAGTCGCCGGAAGCCACCACCGCCGTCACAACCACCTTCTTCAAACTCAAGTAACAAACCAC CACGACCGTTTCTACCACCGCTTCAGCCACTCTCAATCAGCAAGCGCAGCGCGGAGGAATGGCCTAGTGCAGGATCTGAC GATCTCGGAGTTTGGCCTCTTCCACAAACCCCAAGAGGGACCTCCATCAATGAATCCACCAATGATTTTCAGTTCAAGAG GGACAAGTTGGCCTTCTTCGACAAAGAGTGTTCCAGAATCGCCGACCATGTCTACTTAGGGAGCGACACGGTGGCCAAGA ACCACCAACTCCTCCGCCAAAACGGAATCACCCACGTCCTCAACTGTGTCGGGTTCGTTTGTCCGGAGTATTTCAAGAGC GATTTTGTCTACAAGACGCTGTGGTTGCACGACAGCCCCACTGAGGACATCACGAGTATCCTCTATGATGTGTTTGATTA CTTTGAGGATGTTCGAGAGCAAGGTGGGCGTGTTCTTGTTCATTGCTGCCAGGGGATTTCTCGATCAACTGCTTTGGTGA TTGCTTACCTCATGTGGAGGAAGGGGCAGAGCTTTGAAGATGCGTTTCAGTTTGTGAAGAGTGCGAGGGCTGTGACTAAT CCCAACATGGGTTTTGCTTGTCAACTCTTGCAGTGTCAGAAACGGGTGCACGCTATGCCGGCGAGTCCGAATTCGGTTGT TAGGATGTACCGGATGGCTCCTCACTCGCCTTATGACCCTCTTCATCTAGTTCCTAAAATGGTGAACCAGCCTGGTGCAC GAGCTCTTGACTCTCGCGGGGCCTTTATTGTCCATGTTCCGTCGGCTATTTATGTTTGGAATGGGAAACATAGTAACTCG GTGATGGCGTGCAATGCGAGGAGTGCGGCGTTTCAGGTCATCCGTTATGAGAGGGCGAACGGTCCAATTCAGAGCATCCA TGAAGATGAAGAACCACCTGAGTTCTGGGTTGCTCTGTCTGATGAGCAACGATTATCGGGTGGTCTTGACAAAGCGGAGG CCATGGAGGAAGAACCAGTGTTGCCTTCTGAAAGCATGGAGATTGATCATAGAAAAGTTGATGCATATGATTTGGATTTT GAGATTTTCGACAAGGCGCTTTCTGGTGGGGTTGTTCCACCCTTTTCTGTGGCTAATGTTGAATCAGAAACTTGCCTTCC GGCTAGAGAACATGGCTGGGGAATACTGAGGCAGAGGTTTGCCAGTGGTGTTATGAAAGATTTGCTCACATCCCCTAAAT GGACCTGTGATGCAATCTCATCCAGTGATCATCAATCCAGAGTTGTCGTGGAAGAAGAAAACCAAGATCTTGTAGCTGGC CCTTTGTCTCCATCATCATCAAGTCAACCATGTGGTTCACCAGATTCCTTTGAATGTTCTCCAGATCACAACTTAGGAAG TCCTAAAGATGTCGTTGAAGTCACGGATTTCTCTGTTCTTGGTGTTGCTTCTTCACTACCATTATCCCCCGCCGGCATAT CAAGCCCTTTTCCTTCTTTTCTAAGCAGCAACAACAACAGCCCCAAATTCTATTCCAAGTCACCAACACTTTCGCCTTCA AGTTCTGACTACGCAAGTTCTTTCACATTCTCACCTTCATCTACCAATTGGTCGGACTTATCATTCGTCTCTTCTCGGCA GCCATCACCATCTGGAATAGAACCAACTGAACCATTCCATGTTAAAGACCTATTTTTCTCAGGAACTTCATCTTTATTTC ACAAAGAAGTGGTCTCTTCACCTTCAGAATCATTTTCCGTTAATCACACCTTGGGAGGGGCAAACTCCAATTTGCCACTA AAAGGGTCTTCTCTCTCCATCGCAGAGCGCAGAGGGAGCAATCCACCACCGCGGATGTTGCTATCCTCGGTCAATGAATC CTCTCATGTCCACAGGAACCTGGAGGACCGCCCCTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0095400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIREEGKNMEKPSAGVVGRKTYSRSVSWTDGSPSRRKPPPPSQPPSSNSSNKPPRPFLPPLQPLSISKRSAEEWPSAGSD DLGVWPLPQTPRGTSINESTNDFQFKRDKLAFFDKECSRIADHVYLGSDTVAKNHQLLRQNGITHVLNCVGFVCPEYFKS DFVYKTLWLHDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGISRSTALVIAYLMWRKGQSFEDAFQFVKSARAVTN PNMGFACQLLQCQKRVHAMPASPNSVVRMYRMAPHSPYDPLHLVPKMVNQPGARALDSRGAFIVHVPSAIYVWNGKHSNS VMACNARSAAFQVIRYERANGPIQSIHEDEEPPEFWVALSDEQRLSGGLDKAEAMEEEPVLPSESMEIDHRKVDAYDLDF EIFDKALSGGVVPPFSVANVESETCLPAREHGWGILRQRFASGVMKDLLTSPKWTCDAISSSDHQSRVVVEEENQDLVAG PLSPSSSSQPCGSPDSFECSPDHNLGSPKDVVEVTDFSVLGVASSLPLSPAGISSPFPSFLSSNNNSPKFYSKSPTLSPS SSDYASSFTFSPSSTNWSDLSFVSSRQPSPSGIEPTEPFHVKDLFFSGTSSLFHKEVVSSPSESFSVNHTLGGANSNLPL KGSSLSIAERRGSNPPPRMLLSSVNESSHVHRNLEDRP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 99 99 - –
MobiDBLite
mobidb-lite
34 61 28 - –
PANTHER
PTHR46381:SF4
35 667 633 1.1E-230 –
PANTHER
PTHR46381
35 667 633 1.1E-230 –
SUPERFAMILY
SSF52799
105 258 154 1.77E-38
IPR029021
Gene3D
G3DSA:3.90.190.10
109 262 154 4.6E-46
IPR029021
SMART
SM00195
116 255 140 5.1E-37
IPR020422
ProSiteProfiles
PS50054
116 257 142 35.511
IPR020422
CDD
cd14498
117 251 135 2.54139E-59 –
Pfam
PF00782
124 254 131 1.9E-29
IPR000340
ProSiteProfiles
PS50056
175 236 62 13.175
IPR000387
ProSitePatterns
PS00383
200 210 11 -
IPR016130
SUPERFAMILY
SSF55753
262 364 103 1.04E-14 –
Gene3D
G3DSA:3.40.20.10
280 367 88 3.1E-12
IPR029006
MobiDBLite
mobidb-lite
472 504 33 - –
MobiDBLite
mobidb-lite
479 495 17 - –
MobiDBLite
mobidb-lite
647 678 32 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004725
Molecular function Protein tyrosine phosphatase activity Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0008138
Molecular function Protein tyrosine/serine/threonine phosphatase activity Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0016311
Biological process Dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
Subterm of
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0095400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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