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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0113200 |
| Transcript ID | LotjaGi6g1v0113200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT3G55950.1 CRINKLY4 related 3; Swiss-Prot: sp|Q9LY50|ACCR3_ARATH Putative serine/threonine-protein kinase-like protein CCR3; TrEMBL-Plants: tr|K7MQ95|K7MQ95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0113200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:27130765..27134211) extracted from Lotus japonicus Gifu genome v1.2.
TATTTAAATTACCAAGGTTGGACCCCAGTAATTGACACCGATTCAATCTTTAAACCTTGAACCAGTGCTTTGACCGGTTT GATGGTCGGTTCGGTTTTCTTAACATTGGTGAAACAGAGACTAGTGTCACTAATGTGATACATTGCTTAACAAGAAAAAA AAAAAATCACCAATTTTTCATAATCTTAAAAAAATAATAATAATATCATCTTCATGTTCATTTTCTCTTCTCACCACTCA CACCATTTCTTATTCAACCATCATTTTCCCTCTCAATGAAGAGGAAGAAGCCTTCACCTTCCCAATGACACCAAAAGCGG CACATTTCACTCTCGCTTTATCCCTCGCCGCCATTTTCACCATAACCGCCGTCAACGCCCTCGGCTCCGCCTCCACCACC GCCATCACCTACGGCACCGCCACCATCTGCGGCATAGTAGCCGGTGAACCCGACCAGAACATCCAATGCTACCGAAACGG CACACATATCCCCTTGATCCTCCCCAACGTTTCCTTCCAGGCAATCTCCGGTGGCCGGAGCTTCTTCTGCGGCCTCCGCT CCGGCGGCTACAGCCTCCATTGTTGGGACACCACTGCACCAGCGTTGGTTTTCCGACCCAGGAGGCTGTATCACAATGAA CTGGTGCAGTTGAGTGATGTAGCAGTTGGTGATGATCAAGTTTGTGCTAGAGAGTTGAAGTCTGGTGTGGTAAGATGTTG GAGAGGTGGTGGTGGAAATGGGTTGGAATTTCTTTCCCCTGAGAAGGGTTTGAGGTTTCGAAGCATCACTTCTGGGTGTG GTTTTTCTTGTGGGATATTGAAGGAGAACAATAGAGTTTGGTGTTGGGGTAAAGGTGAAAATGGTGATAACATTCATACA AATTTTGGGAATTTGTCAATGTCAACATTAGTTGCTGGGGTGTCTCATGTTTGTGGTTTGACTTTTAATGGGGTTTTGGT TTGTGGGGGAAACAATGGTTCTGGTCAACTGGGTGTTCCTTTTAGTTCACCATCAAGTTTTTCAGGTCTTGCTTTGGGGG AAGATTTCACTTGTGCTATTAAGCGCAGAAATGGACTTATTGAGTGTTTTGGAGGTGGCTGCAGCAAGTTCAGGTTTGAT TTGATTCAGGGTGTTTCTTATGAGTCCATTGTTGCTGGTTTGGATTTTGTTTGTGGGGTCACAACTAAGAATTTGTCTGT GATTTGCTGGGGTCCTGGTTGGTCTAAGCTTCAATTGCCTAGTGATCTTCCTCTGGGAATGGTTCTTCCAGGTCCATGTG TTAAGAATGGTTGTGGTTCTTGTGGTATGTATCCAAATTCTGATATGCTCTGTCATGGATCTGGAAGCATTTGCTATTCA TGCCAGATTGAAGTTCCACAAGCTGTGCCATTGCTACCATCATCACCAGGTTTACCCAGGCAACAGTTTAATTCCTCAGC GGGAGATAAAAACTTGAGTGAATCCTTGGCCTTTCTGATTGTTGGATCAATTGGGGCTTTTGCAGGGCTATGCACAATTC TTTATCTCCTTTGGATTGGAGCAAGAAAGTTTTTTAAGAAAAAAGTTGATAATTCTGTGCAACCCACAAATAGCGAGTCT GATGCCTATGATGATATGGATCCCATGCCTAATCTTTGTTCAAATGTGACACCAACATTAAGATCTTATTCTAGCAAAAT GCTCAGCTCAAGAAGATTCAGGAGTGGTTCATCATCAAAGCAATTAGACAGGACAGAGAGTTTCTCATTATGTGAACTAG CTGAGGCCACCGACAATTTCTCAGTGGGTAACAAGATAGGCGCTGGTAGTTTTGGCAGTGTTTACAAAGGCAAGCTAGCA GACGGTCGCGAAGTGGCGGTTAAAAGAGGAGATACCAGCACTAAGAAGAAGAAATTCCAGGAGAAAGAAATTGCTTTTGA TTCTGAATTGCTATTGCTGTCCCGGCTTCACCACAAGCACTTGGTGAGGCTAATCGGGTTCTGTGAGGAGAACGAAGAGC GGCTTCTGGTTTACGAGTACATGAGCAACGGATCGCTCCATGATCATTTACATAACAAGAATAATGTTGAGAAAGGTAGC AGCATTTTGAATTCTTGGAAGATGAGGATCAAAATTGCTTTAGATGCTGCTAGGGGAATTGAGTACCTTCACAACTACGC AGTGCCTCCCATAATTCACAGAGATATTAAGTCATCTAATATATTGTTAGATTCAAATTGGAATGCTAGAGTTTCTGATT TTGGATTGTCATTAATTTGGACTGAGAGTGAGAGTGAGCAAGAAGTGGTGTCCACCAAAGCTGTTGGAACTGTTGGGTAC ATTGACCCTGAGTACTATGTGCTGAATGTGCTAACCACAAAGAGTGATGTGTATGGTTTGGGAGTGGTGTTGTTGGAGCT TCTGACAGGAGAGAAAGCAGTGTTCAAAGCAAAAGATGGGTCAGGGCCTATTGGTTTGGTGGAATATGCTGAGCCAAAAA TAGCAGCAGGAGAGGTGTGGAGTGTGTTGGATTACAGAATTGGAGAGCCGGAAGTGAATGAGGTTGAGTCTCTTGAGCTC ATGGCTTACACTGCCATGGATTGTGTGAACTTGGAGGGGAAGGGGAGGCCTGACATGACCAACATTGTTGCTAACTTGGA GAGGGCATTGGCTTTTGTTGAGTACAGTCCTGGTAGCATCTCTAGATCTTCATTCTCTGCACCTCTTTAGTGCAAAATTC ATACTCCTAATAGATTCATGTGATTCTTTTGTTCCTTTGTAGATTTTGATTTCCTTTTTTCTTTTGTAAAATTATTCTTT GGGTCGAAATAAATTTAGGTGAACATAAAAAGTAATGCTCATATGTGATTTTGGGGATATAGTCCTAACTCAACTATTTT ACCCCCAAAAACTAGAGAAAAACAAAAGGATTAATAGTCAGCAGGGAGCTGAAGCAACAAAGAAGTGACTATTTACTATT TTACTACTTCAAATGTATACAATTTCTCTTTTATTTCATTTCCATATACTTTCTCTTCCTATTTTTCTCTTATTTGTTTA TCACATCACCGATCATATCTCTCACTTTTATGTTCTATTTATATCTCTTAAGGTGGAATTTAGGTTATGTTTCCTTACTA CTTACTACTTAGTACTTACTTAGTTGACTAGTGACTACATGATTTTGCTACCCTTTCTCAAAGAACTGTGTGGTACACAA CTCAGGATTCTCTAAGAAATAATGAGTTAGGTATCACTTCACTCTCATGGGACTTAATGAGTAGTTACATTCTTTGAATC TTAGTTTTTTACTCAAACTGCCCTAACCATTTGGTAACACTTTTGAAGATTTTGAATAAATTAATTTGGTCAATATACTT CTGTCACCATTTTCCCCTTAATTTATAGCTGGCCTTGGAGGCTTGCAGTATCAGAACTAATAATTAACACAAGTAGTCTT ACGTGCC
CDS sequence (LotjaGi6g1v0113200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACCAAAAGCGGCACATTTCACTCTCGCTTTATCCCTCGCCGCCATTTTCACCATAACCGCCGTCAACGCCCTCGG CTCCGCCTCCACCACCGCCATCACCTACGGCACCGCCACCATCTGCGGCATAGTAGCCGGTGAACCCGACCAGAACATCC AATGCTACCGAAACGGCACACATATCCCCTTGATCCTCCCCAACGTTTCCTTCCAGGCAATCTCCGGTGGCCGGAGCTTC TTCTGCGGCCTCCGCTCCGGCGGCTACAGCCTCCATTGTTGGGACACCACTGCACCAGCGTTGGTTTTCCGACCCAGGAG GCTGTATCACAATGAACTGGTGCAGTTGAGTGATGTAGCAGTTGGTGATGATCAAGTTTGTGCTAGAGAGTTGAAGTCTG GTGTGGTAAGATGTTGGAGAGGTGGTGGTGGAAATGGGTTGGAATTTCTTTCCCCTGAGAAGGGTTTGAGGTTTCGAAGC ATCACTTCTGGGTGTGGTTTTTCTTGTGGGATATTGAAGGAGAACAATAGAGTTTGGTGTTGGGGTAAAGGTGAAAATGG TGATAACATTCATACAAATTTTGGGAATTTGTCAATGTCAACATTAGTTGCTGGGGTGTCTCATGTTTGTGGTTTGACTT TTAATGGGGTTTTGGTTTGTGGGGGAAACAATGGTTCTGGTCAACTGGGTGTTCCTTTTAGTTCACCATCAAGTTTTTCA GGTCTTGCTTTGGGGGAAGATTTCACTTGTGCTATTAAGCGCAGAAATGGACTTATTGAGTGTTTTGGAGGTGGCTGCAG CAAGTTCAGGTTTGATTTGATTCAGGGTGTTTCTTATGAGTCCATTGTTGCTGGTTTGGATTTTGTTTGTGGGGTCACAA CTAAGAATTTGTCTGTGATTTGCTGGGGTCCTGGTTGGTCTAAGCTTCAATTGCCTAGTGATCTTCCTCTGGGAATGGTT CTTCCAGGTCCATGTGTTAAGAATGGTTGTGGTTCTTGTGGTATGTATCCAAATTCTGATATGCTCTGTCATGGATCTGG AAGCATTTGCTATTCATGCCAGATTGAAGTTCCACAAGCTGTGCCATTGCTACCATCATCACCAGGTTTACCCAGGCAAC AGTTTAATTCCTCAGCGGGAGATAAAAACTTGAGTGAATCCTTGGCCTTTCTGATTGTTGGATCAATTGGGGCTTTTGCA GGGCTATGCACAATTCTTTATCTCCTTTGGATTGGAGCAAGAAAGTTTTTTAAGAAAAAAGTTGATAATTCTGTGCAACC CACAAATAGCGAGTCTGATGCCTATGATGATATGGATCCCATGCCTAATCTTTGTTCAAATGTGACACCAACATTAAGAT CTTATTCTAGCAAAATGCTCAGCTCAAGAAGATTCAGGAGTGGTTCATCATCAAAGCAATTAGACAGGACAGAGAGTTTC TCATTATGTGAACTAGCTGAGGCCACCGACAATTTCTCAGTGGGTAACAAGATAGGCGCTGGTAGTTTTGGCAGTGTTTA CAAAGGCAAGCTAGCAGACGGTCGCGAAGTGGCGGTTAAAAGAGGAGATACCAGCACTAAGAAGAAGAAATTCCAGGAGA AAGAAATTGCTTTTGATTCTGAATTGCTATTGCTGTCCCGGCTTCACCACAAGCACTTGGTGAGGCTAATCGGGTTCTGT GAGGAGAACGAAGAGCGGCTTCTGGTTTACGAGTACATGAGCAACGGATCGCTCCATGATCATTTACATAACAAGAATAA TGTTGAGAAAGGTAGCAGCATTTTGAATTCTTGGAAGATGAGGATCAAAATTGCTTTAGATGCTGCTAGGGGAATTGAGT ACCTTCACAACTACGCAGTGCCTCCCATAATTCACAGAGATATTAAGTCATCTAATATATTGTTAGATTCAAATTGGAAT GCTAGAGTTTCTGATTTTGGATTGTCATTAATTTGGACTGAGAGTGAGAGTGAGCAAGAAGTGGTGTCCACCAAAGCTGT TGGAACTGTTGGGTACATTGACCCTGAGTACTATGTGCTGAATGTGCTAACCACAAAGAGTGATGTGTATGGTTTGGGAG TGGTGTTGTTGGAGCTTCTGACAGGAGAGAAAGCAGTGTTCAAAGCAAAAGATGGGTCAGGGCCTATTGGTTTGGTGGAA TATGCTGAGCCAAAAATAGCAGCAGGAGAGGTGTGGAGTGTGTTGGATTACAGAATTGGAGAGCCGGAAGTGAATGAGGT TGAGTCTCTTGAGCTCATGGCTTACACTGCCATGGATTGTGTGAACTTGGAGGGGAAGGGGAGGCCTGACATGACCAACA TTGTTGCTAACTTGGAGAGGGCATTGGCTTTTGTTGAGTACAGTCCTGGTAGCATCTCTAGATCTTCATTCTCTGCACCT CTTTAG
Protein sequence (LotjaGi6g1v0113200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTPKAAHFTLALSLAAIFTITAVNALGSASTTAITYGTATICGIVAGEPDQNIQCYRNGTHIPLILPNVSFQAISGGRSF FCGLRSGGYSLHCWDTTAPALVFRPRRLYHNELVQLSDVAVGDDQVCARELKSGVVRCWRGGGGNGLEFLSPEKGLRFRS ITSGCGFSCGILKENNRVWCWGKGENGDNIHTNFGNLSMSTLVAGVSHVCGLTFNGVLVCGGNNGSGQLGVPFSSPSSFS GLALGEDFTCAIKRRNGLIECFGGGCSKFRFDLIQGVSYESIVAGLDFVCGVTTKNLSVICWGPGWSKLQLPSDLPLGMV LPGPCVKNGCGSCGMYPNSDMLCHGSGSICYSCQIEVPQAVPLLPSSPGLPRQQFNSSAGDKNLSESLAFLIVGSIGAFA GLCTILYLLWIGARKFFKKKVDNSVQPTNSESDAYDDMDPMPNLCSNVTPTLRSYSSKMLSSRRFRSGSSSKQLDRTESF SLCELAEATDNFSVGNKIGAGSFGSVYKGKLADGREVAVKRGDTSTKKKKFQEKEIAFDSELLLLSRLHHKHLVRLIGFC EENEERLLVYEYMSNGSLHDHLHNKNNVEKGSSILNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWN ARVSDFGLSLIWTESESEQEVVSTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVLLELLTGEKAVFKAKDGSGPIGLVE YAEPKIAAGEVWSVLDYRIGEPEVNEVESLELMAYTAMDCVNLEGKGRPDMTNIVANLERALAFVEYSPGSISRSSFSAP L
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 8 | 20 | 13 | - | – | |
| PANTHER | 8 | 795 | 788 | 0.0 | – | |
| PANTHER | 8 | 795 | 788 | 0.0 | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Phobius | 26 | 387 | 362 | - | – | |
| Gene3D | 58 | 316 | 259 | 2.0E-25 | ||
| SUPERFAMILY | 111 | 333 | 223 | 1.66E-22 | ||
| Phobius | 388 | 410 | 23 | - | – | |
| TMHMM | 388 | 410 | 23 | - | – | |
| Phobius | 411 | 801 | 391 | - | – | |
| Gene3D | 464 | 572 | 109 | 1.8E-33 | – | |
| SUPERFAMILY | 468 | 778 | 311 | 8.23E-75 | ||
| SMART | 492 | 785 | 294 | 2.6E-28 | ||
| ProSiteProfiles | 492 | 785 | 294 | 37.05 | ||
| Pfam | 493 | 710 | 218 | 1.0E-46 | ||
| CDD | 498 | 780 | 283 | 2.43979E-85 | – | |
| ProSitePatterns | 498 | 520 | 23 | - | ||
| Gene3D | 573 | 787 | 215 | 1.4E-50 | – | |
| ProSitePatterns | 623 | 635 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0113200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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