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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0183600 |
| Transcript ID | LotjaGi6g1v0183600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IQ97|G7IQ97_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi6g1v0183600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47662557..47666825) extracted from Lotus japonicus Gifu genome v1.2.
CTCGAAGAAAAATAGTCCAACAGCTTACTTATAGAACAGGACATGCCGCGGCAACGAGGAGACCGCTATCTACTACTAAG CGCCAAGTGAACGCGGAGATTGTGATGCCAATTCACAAAGTAAGCAAGGATGGTGATGAAAGACACAACCAATCATTGGC CACACCACTGCAGTGTCAATTCAGCAGCTTAAGCTATTTATGAGCTCAACTTTCATCATTTCATCTATCACCTAAAACTT GAGAAAAAGCAGAGGCAAAAGGGTGTTCTGTTCCTCCTAATTAGTTATTCAATGACACACCCAACAACACTACCTTCTCC ATCTACCTTCACCTGTGATTGGACTTATGATGTCTTCCTCAACTTCAGAGGCAGCGAAACCCGCCACGGTTTCACAGGCA ATCTCTACAATTCTCTGCACCAAAAGGGTATACATACCTTCATAGATGATGAAAGGCTAAACAAAGGAGAAGAAATCACA CCATCCCTTCTCCATGCCATTAAAGAGTCTAGGATTTTCATTTCTGTTTTCTCTGAGAACTATGCATCCTCAACTCATTG CTTGGATGAACTTGTTATGATCATGGACTGCTCCAAGGCACAAGGACGGTTGTTTTTGCCGGTGTTTTATGGTGTGGATC CTTCACAAGTTCGCCACCAAAGTGGGGCTTACAAAGATGCTTTGGCAAAACATAAGGAGAGGTTTCAAGATGACAAGGGA AAGGTTCAAAAATGGAGGGATGCTTTATGTCAAGCTGCTAATGTGTCTGGTTGGCACTTCCAACAAGGGTACGTAGCTCT CACACCACCCTTTTTATAGACATATCTTTTTAGTACCCCCTTTATTGTTGTTTGCCTAATGAAATCCATATCAATATACA AGGCAAAAGAAATAGGTGAGAGTTTAGATGTAGCAAACACTTTGCGTGTTTGGTTATGCAAAAAAGTAGTCTCATAATCA CTTATAGGGAAAAGGGCTATAAAGTGTAACTTTGTGGAGTTACCGTACTTTGAATTATGCGTTACCATGAATCTAAACAC GCTATTAGTGTTAAGTACAATAACTTGTATATGTCTATGATTATCAATGAAGTAAACTCATTTAAATCTTCAATTTCAAT TTATATGTATTTAAAAGTGTTTCTATAATGTGCAGGTCTCAATCAGAATACAAGTTTATTGGAAAGATTGTGGAAGAGGT CTCAGAAAAGATTAATCGCACTCCTTTACATGTTGCTGATAAACCGGTTGCGCTGGAGTCTCCGGTGCTAGCAGTGGTGT CTTCTCTCCTAGGACTTGGCTCTGATGAGGAGGTCAACATGGTTGGCATTCATGGAATAGGTGGAATCGGTAAATCGACA ATTGCTCGTGCGGTTTACAACATGATTGCTGATCAGTTTGAAGGTTTGTGTTTTCTTGCAGACATAAGACAAAGGGCTAT TAATCATGGTCTTGCACAACTTCAAGAGACACTACTTTCTGAAGTATTGGGGGAGAAGGATATCAAAGTGGGAGATGTTT ACAGAGGAATATCAATGATAAAAAAGAGGCTTCATCGAAAGAAGGTTCTTATGATTCTTGATGATGTTGACAACCAGAAG CAGTTACAAGCACTTGCTGGACATGATTGGTTTGGCTCTGACAGCAAGATCATAATCACAACAAGAAACAAGCATTTGCT GGCCACTCATGGGGTAGTGAAATTATATGAGGTGAAACAATTAAATGATGAAACAGCACTTGAGTTGTTCAATTGGCATA CCTTCAAACATAAAGAAATTTCTCCAGATTATGCTGATATTTCAAAACGAGCAGTTTCTTATGCTCAAGGCCTTCCATTG GCTTTGGAGGTGATAGGCTCTTACTTGTTTGGCAAAAGTTTAAGTGTATGGAAATCTGCACTGGATAAATATGAAACGAT TCTTCACAAAGACATCCATGAAATACTTAAAGTTAGCTATGATGTTTTGGAGGAAGATGAGAAGGGCATTTTTCTTGACA TAGCTTGTTTCTTCAACTCTTACCAAATGGGATATATCAAAGAAATACTGAACTTACATGGTTTCAATGCGGAAAATGGA ATGCAAGTGCTGAATGACAAATCTCTCATAAAAATTGATGGAAGTGGTTGTGTAAAAATGCATGACTTAATTCAAGACAT GGGCAGAGAAATCGTAAGGCTGGAATCAACAATGGAGCCTGGAAAACGCAGTAGATTATGGCTTACCGAGGACATAGTTA ATGTTTTGGAAGAAAATACGGTATGTTGGAACTTAAAAAAATATCAATGTCATTTATTCTCTTTGCCTTCCTTTATAATA CACATTTTGACTAGTATATATTAAATGACTAGATTCTTATTTCTCTGTATTCAATTTGAAATATTTGATGAAATTTTACC ACTATAGCAGAAAAGGACATTCTGGTTTAGAATTAGCAATTAATTGAAGTATGTAGATGTAATTGCTAAACTTTACATTC TGTTTAAATTATGATTTGGATTTGAAGGGGACTGATACAGTTGAAGTTGTGGTCATCAACCTATGCAAAGACAAAGAAGT GCAGTGGAATGGAAAAGCCTTCAAGAAAATGAAAAATCTAAGAATTCTCATTGTTACAAATGCATGTTTCTCTAGAGGCC CTCAAAATCTACCAAATAGTCTTAGAGTTTTAGACTGGAGTGCATATCCATCACTATCTTTACCAGCTGATTTTAATCCC AAGAATCTTGTGATACTTAGCCTCCCTGAAAGTTGTCTTCAATCGTTCAAATCACCTAAGGTATCTATTTTCAAAGTCCT TTTATATATTGAACACATTCCATGGTTCTAATAAAGAAAAATATGGATGTCCAATTGAAAGCTCATAATGAGTCACTAAT TTTTGTTTTGTAGGTGTTTGAGTCCTTGAACTTTATTGATTTTGAAGGCTGCAAATTCTTAACTGAACTACCTAACTTGT CTGGGCTACCAAATTTGGGGGCATTGTGTCTTGACTATTGTTCTAATTTAATTAAGATTCATGGCTCAGTGGGGTTTCTT AATAGACTCATGTTATTGAGTGCTCAAGGATGCACCCAACTAGAAATGTTGGTGCCCTTCATCAATTTGCCATCTCTAGA GACTCTGGATTTGAGAGGCTGCTCGCGTCTTAAGAGCTTCCCAGAAGTATTGGGAGTGATGGAGAACATTGAAGATGTTT ATTTAGACCAGACTGCCATAGATAAATTGCCATGCTCAATTGGAAATCTTGTTGGACTCCGACGATTGTTCTTGAGGGAA TGCAAGAATCTAATTCAGTTACCAAGCAATGTCCATACATTGCCTAAACTTGAGGTAATAATGAGTTATGATTGTGGGGG ATTTCAGTTGTTCGAGGGTGAAGAAAAAGTAAGGACACAGGTATTTTCAAAATCAATGCTTGTTTATAATGAAGGCAAAG AGGTGTTACTTGATGTATATTCTCTTAACATGTCTCATAATAATTTCATAGAATTACGAAGACCTTTGTGGAGTCCCCAT GGACCTGCGGGTAGTGTTCTTGGATTCATGATTAAAGGGATTCTAGATGGGACCGTAAATTTGTATGGACTCAGAAGCAA GGAATCATCCATGTGTTTCTGGTTCATAAAGAAATTTCCCGATATAGCTCTATGTTGTGCTGGAGAGCCAAGTGTGTATA AAGACAATATGATATTGGATTTCAAGTTCAGTGTACTCATCAATGGCACCAAGCAGTTAAGTTCTTCATGTAACTACATA TTTTCTGCAGAAAGAATGACAGAACAAATGTTTTTGTGTGATCTGTTATGCAAAAAGGAGACAGCATTTCCAGAACATGA ATGGAATCAAGTAGAGATTTTATGTGAGTTGAAGTACCCCATGCCATGTGGCTCTGAAAGGGTAATGGGTGCCGAAGACA GGACCACAATGGGAGTTCCAAGTTGGTCCCTCATTTATGTCTTTGAAGAATACAAGGAGGATTTCAAATTTATGTATGAG TTTCAGGAATGTAAAGAGATGCAGAGGAGAAAGGACACACTATTCGGCTTTCACTCCATGCTCAAGCGTCGCGGATTAAA TTGGATTGGGTTTTGATTTTGAAAAAAGTCCATGGAAGCAGTGATTCAAATCCTTGACAAACTTCAGAGCAATTCAATCG AAAATAGAAAATGTTAAAATAATACCATCATGTTATTGTTGAACATCAATTTCTACCAGCCCCATTTTATTAATCAAGAG ATCCTTATGATCCAATGACTATGAATGTG
CDS sequence (LotjaGi6g1v0183600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACACCCAACAACACTACCTTCTCCATCTACCTTCACCTGTGATTGGACTTATGATGTCTTCCTCAACTTCAGAGG CAGCGAAACCCGCCACGGTTTCACAGGCAATCTCTACAATTCTCTGCACCAAAAGGGTATACATACCTTCATAGATGATG AAAGGCTAAACAAAGGAGAAGAAATCACACCATCCCTTCTCCATGCCATTAAAGAGTCTAGGATTTTCATTTCTGTTTTC TCTGAGAACTATGCATCCTCAACTCATTGCTTGGATGAACTTGTTATGATCATGGACTGCTCCAAGGCACAAGGACGGTT GTTTTTGCCGGTGTTTTATGGTGTGGATCCTTCACAAGTTCGCCACCAAAGTGGGGCTTACAAAGATGCTTTGGCAAAAC ATAAGGAGAGGTTTCAAGATGACAAGGGAAAGGTTCAAAAATGGAGGGATGCTTTATGTCAAGCTGCTAATGTGTCTGGT TGGCACTTCCAACAAGGGTCTCAATCAGAATACAAGTTTATTGGAAAGATTGTGGAAGAGGTCTCAGAAAAGATTAATCG CACTCCTTTACATGTTGCTGATAAACCGGTTGCGCTGGAGTCTCCGGTGCTAGCAGTGGTGTCTTCTCTCCTAGGACTTG GCTCTGATGAGGAGGTCAACATGGTTGGCATTCATGGAATAGGTGGAATCGGTAAATCGACAATTGCTCGTGCGGTTTAC AACATGATTGCTGATCAGTTTGAAGGTTTGTGTTTTCTTGCAGACATAAGACAAAGGGCTATTAATCATGGTCTTGCACA ACTTCAAGAGACACTACTTTCTGAAGTATTGGGGGAGAAGGATATCAAAGTGGGAGATGTTTACAGAGGAATATCAATGA TAAAAAAGAGGCTTCATCGAAAGAAGGTTCTTATGATTCTTGATGATGTTGACAACCAGAAGCAGTTACAAGCACTTGCT GGACATGATTGGTTTGGCTCTGACAGCAAGATCATAATCACAACAAGAAACAAGCATTTGCTGGCCACTCATGGGGTAGT GAAATTATATGAGGTGAAACAATTAAATGATGAAACAGCACTTGAGTTGTTCAATTGGCATACCTTCAAACATAAAGAAA TTTCTCCAGATTATGCTGATATTTCAAAACGAGCAGTTTCTTATGCTCAAGGCCTTCCATTGGCTTTGGAGGTGATAGGC TCTTACTTGTTTGGCAAAAGTTTAAGTGTATGGAAATCTGCACTGGATAAATATGAAACGATTCTTCACAAAGACATCCA TGAAATACTTAAAGTTAGCTATGATGTTTTGGAGGAAGATGAGAAGGGCATTTTTCTTGACATAGCTTGTTTCTTCAACT CTTACCAAATGGGATATATCAAAGAAATACTGAACTTACATGGTTTCAATGCGGAAAATGGAATGCAAGTGCTGAATGAC AAATCTCTCATAAAAATTGATGGAAGTGGTTGTGTAAAAATGCATGACTTAATTCAAGACATGGGCAGAGAAATCGTAAG GCTGGAATCAACAATGGAGCCTGGAAAACGCAGTAGATTATGGCTTACCGAGGACATAGTTAATGTTTTGGAAGAAAATA CGGGGACTGATACAGTTGAAGTTGTGGTCATCAACCTATGCAAAGACAAAGAAGTGCAGTGGAATGGAAAAGCCTTCAAG AAAATGAAAAATCTAAGAATTCTCATTGTTACAAATGCATGTTTCTCTAGAGGCCCTCAAAATCTACCAAATAGTCTTAG AGTTTTAGACTGGAGTGCATATCCATCACTATCTTTACCAGCTGATTTTAATCCCAAGAATCTTGTGATACTTAGCCTCC CTGAAAGTTGTCTTCAATCGTTCAAATCACCTAAGGTGTTTGAGTCCTTGAACTTTATTGATTTTGAAGGCTGCAAATTC TTAACTGAACTACCTAACTTGTCTGGGCTACCAAATTTGGGGGCATTGTGTCTTGACTATTGTTCTAATTTAATTAAGAT TCATGGCTCAGTGGGGTTTCTTAATAGACTCATGTTATTGAGTGCTCAAGGATGCACCCAACTAGAAATGTTGGTGCCCT TCATCAATTTGCCATCTCTAGAGACTCTGGATTTGAGAGGCTGCTCGCGTCTTAAGAGCTTCCCAGAAGTATTGGGAGTG ATGGAGAACATTGAAGATGTTTATTTAGACCAGACTGCCATAGATAAATTGCCATGCTCAATTGGAAATCTTGTTGGACT CCGACGATTGTTCTTGAGGGAATGCAAGAATCTAATTCAGTTACCAAGCAATGTCCATACATTGCCTAAACTTGAGGTAA TAATGAGTTATGATTGTGGGGGATTTCAGTTGTTCGAGGGTGAAGAAAAAGTAAGGACACAGAATTACGAAGACCTTTGT GGAGTCCCCATGGACCTGCGGGTAGTGTTCTTGGATTCATGA
Protein sequence (LotjaGi6g1v0183600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTHPTTLPSPSTFTCDWTYDVFLNFRGSETRHGFTGNLYNSLHQKGIHTFIDDERLNKGEEITPSLLHAIKESRIFISVF SENYASSTHCLDELVMIMDCSKAQGRLFLPVFYGVDPSQVRHQSGAYKDALAKHKERFQDDKGKVQKWRDALCQAANVSG WHFQQGSQSEYKFIGKIVEEVSEKINRTPLHVADKPVALESPVLAVVSSLLGLGSDEEVNMVGIHGIGGIGKSTIARAVY NMIADQFEGLCFLADIRQRAINHGLAQLQETLLSEVLGEKDIKVGDVYRGISMIKKRLHRKKVLMILDDVDNQKQLQALA GHDWFGSDSKIIITTRNKHLLATHGVVKLYEVKQLNDETALELFNWHTFKHKEISPDYADISKRAVSYAQGLPLALEVIG SYLFGKSLSVWKSALDKYETILHKDIHEILKVSYDVLEEDEKGIFLDIACFFNSYQMGYIKEILNLHGFNAENGMQVLND KSLIKIDGSGCVKMHDLIQDMGREIVRLESTMEPGKRSRLWLTEDIVNVLEENTGTDTVEVVVINLCKDKEVQWNGKAFK KMKNLRILIVTNACFSRGPQNLPNSLRVLDWSAYPSLSLPADFNPKNLVILSLPESCLQSFKSPKVFESLNFIDFEGCKF LTELPNLSGLPNLGALCLDYCSNLIKIHGSVGFLNRLMLLSAQGCTQLEMLVPFINLPSLETLDLRGCSRLKSFPEVLGV MENIEDVYLDQTAIDKLPCSIGNLVGLRRLFLRECKNLIQLPSNVHTLPKLEVIMSYDCGGFQLFEGEEKVRTQNYEDLC GVPMDLRVVFLDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 9 | 161 | 153 | 8.63E-40 | ||
| Gene3D | 13 | 192 | 180 | 2.0E-68 | ||
| PANTHER | 16 | 767 | 752 | 1.1E-276 | – | |
| PANTHER | 16 | 767 | 752 | 1.1E-276 | – | |
| ProSiteProfiles | 17 | 158 | 142 | 27.219 | ||
| SMART | 18 | 158 | 141 | 1.2E-40 | ||
| Pfam | 19 | 189 | 171 | 8.4E-45 | ||
| SUPERFAMILY | 186 | 448 | 263 | 2.78E-64 | ||
| Gene3D | 193 | 349 | 157 | 2.8E-29 | – | |
| Pfam | 214 | 436 | 223 | 1.6E-26 | ||
| PRINTS | 221 | 236 | 16 | 3.5E-25 | – | |
| PRINTS | 297 | 311 | 15 | 3.5E-25 | – | |
| PRINTS | 389 | 403 | 15 | 3.5E-25 | – | |
| SUPERFAMILY | 425 | 531 | 107 | 1.22E-18 | ||
| Gene3D | 530 | 785 | 256 | 8.8E-31 | ||
| SUPERFAMILY | 540 | 782 | 243 | 1.02E-32 | – | |
| PRINTS | 695 | 711 | 17 | 3.5E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi6g1v0183600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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