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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0183700 |
| Transcript ID | LotjaGi6g1v0183700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IQ97|G7IQ97_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi6g1v0183700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47675404..47679755) extracted from Lotus japonicus Gifu genome v1.2.
GAGAAAGTTCACTGCAACTGCAATGTCTCCAAGAGTGAACACAGAAGTTGTGTTAACTCAAGTGAAGTCAACTCATGCAG GATCGCGATGTACTACTCTAAGCATCAAGTCAACACGCGCGTAACCTGTGATGCCAATTCAATTCCCAGTTCCCACCACC TTCGCAGAATCTTCAACGAACAAAGTAAGCAAGTATGGTGATGCAAGACACAACCTGCAGTGTCAGTTCAGCTATTTATG AACTCAACTTTCATCATCATCTCATTTATCTTCAACCAAAAGCTTGAAAAAAGCAGAGGCAAAAGGGTGTTCTCTTCCTC CTTAATTAGTTTTTCTTGCTCTCACATCAATGGAACACCCAACAATACTACCTTCTCCATCTTCCTTCACCTGTGATTGG ACTTATGATGTCTTCCTCAACTTCAGAGGCATCGACACACGCCACGGTTTCACTGGCAATATCTACAATTCTCTGCACCA AAAGGGTATCCACACCTTCATTGATGATGAAAGGCTCAACAAAGGAGAAGAAATCACACCAGCTCTTCTCCATGCTATCA AAGAGTCCAGGATTTTCATTTCTGTTTTCTCTGAGAACTATGCCTCCTCGACGCATTGCTTGGATGAACTTGTCATGATC CTTGAGTGTTCCAAGGCGCAAGGACGGTTGTTTTGGCCGGTTTTTTTTGGTGTGGATCCTTCACAAGTTCGCCACCAAAG TGGGGCTTATAAAGATGCTTTGGCAAAACATGAGGAGAGGTTTCAAGATGACAAGGGAAAGGTTCAAAAATGGAAGGATG CTTTATGTCAAGCTGCAAATGTGTCTGGCTGGCACTTCCAACAAGGGTACGTAGCTCTCACACCATCCTTTTTATAGACA TATATATCTTTTTCATATCAATATACAAGGCAAAAGAAATAGGTGAGAGTTTAGATGCAGCAAACACTTAGCCTGTTTGG TTCTGCAGTAAGTAGTCTCATAATCACTTATAGGGAAAGGTTATAAAGTGTAGCTTGTGGAGTTACCGTACTTTGAATTA TGTGTTACCACGAATCTAAACACACTAATAGTGTTAAGTATAATAATTTGAAGTAAACACATTTAAATCTTCAATTTCAA TTTATATGTATTTAAAAGTGTTTCTATAATGTGCAGGTCTCAATCAGAATACATGTTTATTGGAAAGATTGTGGAAGAGG TCTCTGAAAAGATTAATCGCACTCCTTTACATGTTGCTTATAAGCCGGTTGGGCTGGAGTCTCCGGTGCTAGCAGTGGTG TCTTCTCTCCTAGGACTTGGGTCTGATGAGGAGGTCAACATGGTTGGCATTCATGGAATAGGTGGAATCGGTAAATCGAC AATTGCTCGTGCGGTTTACAACATGATTGCTGATCAGTTTGAAGGTTTGTGTTTTCTTGCAGACATAAGACAAAGGGCTA TTAATCATGGTCTTGCACAACTCCAAGAGACACTACTTTCTGAAGTATTGGGGGAGAAGGATTTCAAAGTGGGAGATGTT TACAGAGGAATGTCAATAATAAAAAAGAGGCTTCATCGAAAGAAGATTCTTTTGATTCTTGATGATGTTGACAGCCAGAA GCAGTTACAAGCACTTTCTGGACATGATTGGTTTGGCTCTGGCAGCAAGATCATAATCACAACAAGAAACAAGCATCTGC TGGCTACTCATGGGGTAGTGAAATTATATGAGGTGAAACAATTAAATGATGAAACAGCACTTGAATTGTTCAATTGGCAT GCCTTCAAACATAAAGAAATTTCTCCAGATTATGCTGATATTTCAAAACGAGCAGTTTCTTATGCTCAAGGCCTTCCATT GGCTTTGGAGGTGATAGGCTCTTACTTGTTTGGCAAAAGTTTAAGTGTATGGAAATCTGCACTGGATAAGTATGAAACAA TTCTTCACAAAGACATCCATGAAATACTTAAAGTTAGCTATGATGATTTGGAGGAAGATGAGAAGGGCATTTTTCTTGAC ATAGCTTGTTTCTTCAACTCTTACCAAATGGGATATGTCAAAGAAATACTATACTTACATGGTTTCAATGCGGAAAATGG AATGCAAGTGCTGAATGACAAATCTCTCATAAAAATTGATGGAAGTGGTTGTGTAAAAATGCATGACTTAATTCAAGACA TGGGCAGAGAAATCGTAAGGCTGGAATCAACAATGGAGCCTGGAAAACGCAGTAGATTATGGCTTACCGAGGACATAGTT CATGTTTTGGAAGAAAATACGGTATGTTAGAACTTAAAAAAATCTCAATGCCATTTATTCTCTTTGCCTTCCTTTATAAT ACACATTTTAACTAGTATATATTAAAAGACTAGATTCTTATTTCTCTGTATTCGATTTGAAATATTTGATGAAATTTTAC CACTCTTAGCAGAAAAGGACACTCTGGTTTAGAATTAGCAATTTATTGAAGTATGTAGATGTAACTGCTAAACTTTACAT TCTGTTTAAATTATGATTTGGATTTGAAGGGGACTGATACAGTTGAAGTTATGGTCATCAACCTATGCAAAGACAAAGAA GTGCAGTGGAATGGAAAAGCCTTCAAGAAAATGAAAAATCTAAGAATTCTCATTGTTACAAATGCATGTTTCTCTAGAGG CCCTCAAAATCTACCAAATAGTCTTAGAGTTTTAGACTGGAGTGCATATCCATCACTATCTTTACCAGCTGATTTCAATC CCAAGAATCTTGTGATACTTAGCCTCCCTGAAAGTTGTCTTCAGTCGTTCAAATCATCCAAGGTATCTATTTTCAAATTC CTTTTATATATTGAACACATTGCTTGGTTCTAATAAAGAAAAATATGGATGTCCAATTGAAAGCTCATAATGTGTCACTA ATTTTTGTTTTGTAGGTGTTTGAGTCCTTGAACTTTATGGATTTTGATGGGTGCAAATTCTTAACTGAACTACCTAACTT GACTGGGCTACCAAATTTGGGGGCATTGTGTCTTGACAATTGTTCTAATTTAATTAAGATTCATGGCTCAGTGGGGTTTC TTAATAAACTCATGTTATTGAGTGTTCAAGGATGCACCCAGCTAGAAATGTTGGTGCCCTTCATCAATTTGCCATCTCTA GAGACTCTGGATTTGAGAGGCTGCTCGCGTCTTAAGAGCTTCCCAAAAGTGTTGGGAGTGATGGAGAACACTGAAGATGT TTATTTAGACCAGACTGCCATAGATAAATTGCCATGCTCAATTGGAAATCTTGTTGGACTCCGACGATTGTTCTTGAGGG AATGCAAGAATCTAATTCAGTTACCAAACAGTGTCCATGCATTGCCTAAACTTGAGGTAATAATGAGTTATGATTGTGGG GGATTTCAGTTGTTCCAGGCTGAAGAAAAAGTGAGCACACAGGTATTTTCAAAATCAATGCTTGTTTATAATGAAGGCAA AGGAGTGTTACTTGATGTATATTCTCTTAACATGTCTCCTAATAATGTCATAGAATTACGTAGACCATTGTGGAGTCCCC ATGGACCTGTGGGTAGTGATCTTGGATTCATGATTAAAGGGGTTCTAGAAGGGACTGTAAATTGGCATGGACTCAGAAGC AAAGAATCATCCATGTGTTTCTGGTTCAGAAAGAAATTCCCCCATATAAGTCTATGTTGTGCTGGAGAGCCGTGTGTGTA TAAAGACAATATGATATTGGATTTCAAGTTCAGTGTACTCATCAATGGCACCAAGCACTTAAGTTCTTCATGTAACTACA TATTTTCTGCAGAAAGAATGACAGAACAAATGCTTTTGTGTGATCTGTTATGCAAAGAGGAGACAGCATTTTCAGAACAT GAATGGAATCAAGTAGAGATTTTATGTGAGTTGAAGTACCCCATGCCATGTGGCTCTGAACGGGTAATGGGTGCCCAAGA CAGGACTACAATGGGAATTCCAAGTTGGTCCCTCATTTATGTCTATGAAGAATACAAGGAGGATGTCAAATTTATGCCTG AGTTTCAGGAATGTAAAGAGATGCAGAGGAGAAAGGACACACTATTTGGCTTTCACTCCATGCTCAAGCGTCACGGATTA AATTGGATTGGCTTTTGATTTTGAATAAAGTCCATGGAAGCAGAGATTCATATCCTTGACAAACTTTAGAGCAACTCAAT CGAAAATAGAAAATGTTAAAATAATACCATCATGTTATAGTTGAGCATCAATTTCTACCAGCTCCATTTTATTAATCAAG AGTTCCTTATGATCCAATGCATACTATGAATGTGTCTAAACCAATAGTCACCCGGAAAGGTGATCTTTAATCGAACTACA TTGAAGAACATTTCATTAACTAATTACTGAAA
CDS sequence (LotjaGi6g1v0183700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACACCCAACAATACTACCTTCTCCATCTTCCTTCACCTGTGATTGGACTTATGATGTCTTCCTCAACTTCAGAGG CATCGACACACGCCACGGTTTCACTGGCAATATCTACAATTCTCTGCACCAAAAGGGTATCCACACCTTCATTGATGATG AAAGGCTCAACAAAGGAGAAGAAATCACACCAGCTCTTCTCCATGCTATCAAAGAGTCCAGGATTTTCATTTCTGTTTTC TCTGAGAACTATGCCTCCTCGACGCATTGCTTGGATGAACTTGTCATGATCCTTGAGTGTTCCAAGGCGCAAGGACGGTT GTTTTGGCCGGTTTTTTTTGGTGTGGATCCTTCACAAGTTCGCCACCAAAGTGGGGCTTATAAAGATGCTTTGGCAAAAC ATGAGGAGAGGTTTCAAGATGACAAGGGAAAGGTTCAAAAATGGAAGGATGCTTTATGTCAAGCTGCAAATGTGTCTGGC TGGCACTTCCAACAAGGGTCTCAATCAGAATACATGTTTATTGGAAAGATTGTGGAAGAGGTCTCTGAAAAGATTAATCG CACTCCTTTACATGTTGCTTATAAGCCGGTTGGGCTGGAGTCTCCGGTGCTAGCAGTGGTGTCTTCTCTCCTAGGACTTG GGTCTGATGAGGAGGTCAACATGGTTGGCATTCATGGAATAGGTGGAATCGGTAAATCGACAATTGCTCGTGCGGTTTAC AACATGATTGCTGATCAGTTTGAAGGTTTGTGTTTTCTTGCAGACATAAGACAAAGGGCTATTAATCATGGTCTTGCACA ACTCCAAGAGACACTACTTTCTGAAGTATTGGGGGAGAAGGATTTCAAAGTGGGAGATGTTTACAGAGGAATGTCAATAA TAAAAAAGAGGCTTCATCGAAAGAAGATTCTTTTGATTCTTGATGATGTTGACAGCCAGAAGCAGTTACAAGCACTTTCT GGACATGATTGGTTTGGCTCTGGCAGCAAGATCATAATCACAACAAGAAACAAGCATCTGCTGGCTACTCATGGGGTAGT GAAATTATATGAGGTGAAACAATTAAATGATGAAACAGCACTTGAATTGTTCAATTGGCATGCCTTCAAACATAAAGAAA TTTCTCCAGATTATGCTGATATTTCAAAACGAGCAGTTTCTTATGCTCAAGGCCTTCCATTGGCTTTGGAGGTGATAGGC TCTTACTTGTTTGGCAAAAGTTTAAGTGTATGGAAATCTGCACTGGATAAGTATGAAACAATTCTTCACAAAGACATCCA TGAAATACTTAAAGTTAGCTATGATGATTTGGAGGAAGATGAGAAGGGCATTTTTCTTGACATAGCTTGTTTCTTCAACT CTTACCAAATGGGATATGTCAAAGAAATACTATACTTACATGGTTTCAATGCGGAAAATGGAATGCAAGTGCTGAATGAC AAATCTCTCATAAAAATTGATGGAAGTGGTTGTGTAAAAATGCATGACTTAATTCAAGACATGGGCAGAGAAATCGTAAG GCTGGAATCAACAATGGAGCCTGGAAAACGCAGTAGATTATGGCTTACCGAGGACATAGTTCATGTTTTGGAAGAAAATA CGGGGACTGATACAGTTGAAGTTATGGTCATCAACCTATGCAAAGACAAAGAAGTGCAGTGGAATGGAAAAGCCTTCAAG AAAATGAAAAATCTAAGAATTCTCATTGTTACAAATGCATGTTTCTCTAGAGGCCCTCAAAATCTACCAAATAGTCTTAG AGTTTTAGACTGGAGTGCATATCCATCACTATCTTTACCAGCTGATTTCAATCCCAAGAATCTTGTGATACTTAGCCTCC CTGAAAGTTGTCTTCAGTCGTTCAAATCATCCAAGGTGTTTGAGTCCTTGAACTTTATGGATTTTGATGGGTGCAAATTC TTAACTGAACTACCTAACTTGACTGGGCTACCAAATTTGGGGGCATTGTGTCTTGACAATTGTTCTAATTTAATTAAGAT TCATGGCTCAGTGGGGTTTCTTAATAAACTCATGTTATTGAGTGTTCAAGGATGCACCCAGCTAGAAATGTTGGTGCCCT TCATCAATTTGCCATCTCTAGAGACTCTGGATTTGAGAGGCTGCTCGCGTCTTAAGAGCTTCCCAAAAGTGTTGGGAGTG ATGGAGAACACTGAAGATGTTTATTTAGACCAGACTGCCATAGATAAATTGCCATGCTCAATTGGAAATCTTGTTGGACT CCGACGATTGTTCTTGAGGGAATGCAAGAATCTAATTCAGTTACCAAACAGTGTCCATGCATTGCCTAAACTTGAGGTAA TAATGAGTTATGATTGTGGGGGATTTCAGTTGTTCCAGGCTGAAGAAAAAGTGAGCACACAGGTATTTTCAAAATCAATG CTTGTTTATAATGAAGGCAAAGGAGTGTTACTTGATGTATATTCTCTTAACATGTCTCCTAATAATGTCATAGAATTACG TAGACCATTGTGGAGTCCCCATGGACCTGTGGGTAGTGATCTTGGATTCATGATTAAAGGGGTTCTAGAAGGGACTGTAA ATTGGCATGGACTCAGAAGCAAAGAATCATCCATGTGTTTCTGGTTCAGAAAGAAATTCCCCCATATAAGTCTATGTTGT GCTGGAGAGCCGTGTGTGTATAAAGACAATATGATATTGGATTTCAAGTTCAGTGTACTCATCAATGGCACCAAGCACTT AAGTTCTTCATGTAACTACATATTTTCTGCAGAAAGAATGACAGAACAAATGCTTTTGTGTGATCTGTTATGCAAAGAGG AGACAGCATTTTCAGAACATGAATGGAATCAAGTAGAGATTTTATGTGAGTTGAAGTACCCCATGCCATGTGGCTCTGAA CGGGTAATGGGTGCCCAAGACAGGACTACAATGGGAATTCCAAGTTGGTCCCTCATTTATGTCTATGAAGAATACAAGGA GGATGTCAAATTTATGCCTGAGTTTCAGGAATGTAAAGAGATGCAGAGGAGAAAGGACACACTATTTGGCTTTCACTCCA TGCTCAAGCGTCACGGATTAAATTGGATTGGCTTTTGA
Protein sequence (LotjaGi6g1v0183700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEHPTILPSPSSFTCDWTYDVFLNFRGIDTRHGFTGNIYNSLHQKGIHTFIDDERLNKGEEITPALLHAIKESRIFISVF SENYASSTHCLDELVMILECSKAQGRLFWPVFFGVDPSQVRHQSGAYKDALAKHEERFQDDKGKVQKWKDALCQAANVSG WHFQQGSQSEYMFIGKIVEEVSEKINRTPLHVAYKPVGLESPVLAVVSSLLGLGSDEEVNMVGIHGIGGIGKSTIARAVY NMIADQFEGLCFLADIRQRAINHGLAQLQETLLSEVLGEKDFKVGDVYRGMSIIKKRLHRKKILLILDDVDSQKQLQALS GHDWFGSGSKIIITTRNKHLLATHGVVKLYEVKQLNDETALELFNWHAFKHKEISPDYADISKRAVSYAQGLPLALEVIG SYLFGKSLSVWKSALDKYETILHKDIHEILKVSYDDLEEDEKGIFLDIACFFNSYQMGYVKEILYLHGFNAENGMQVLND KSLIKIDGSGCVKMHDLIQDMGREIVRLESTMEPGKRSRLWLTEDIVHVLEENTGTDTVEVMVINLCKDKEVQWNGKAFK KMKNLRILIVTNACFSRGPQNLPNSLRVLDWSAYPSLSLPADFNPKNLVILSLPESCLQSFKSSKVFESLNFMDFDGCKF LTELPNLTGLPNLGALCLDNCSNLIKIHGSVGFLNKLMLLSVQGCTQLEMLVPFINLPSLETLDLRGCSRLKSFPKVLGV MENTEDVYLDQTAIDKLPCSIGNLVGLRRLFLRECKNLIQLPNSVHALPKLEVIMSYDCGGFQLFQAEEKVSTQVFSKSM LVYNEGKGVLLDVYSLNMSPNNVIELRRPLWSPHGPVGSDLGFMIKGVLEGTVNWHGLRSKESSMCFWFRKKFPHISLCC AGEPCVYKDNMILDFKFSVLINGTKHLSSSCNYIFSAERMTEQMLLCDLLCKEETAFSEHEWNQVEILCELKYPMPCGSE RVMGAQDRTTMGIPSWSLIYVYEEYKEDVKFMPEFQECKEMQRRKDTLFGFHSMLKRHGLNWIGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 9 | 161 | 153 | 3.53E-37 | ||
| Gene3D | 13 | 191 | 179 | 1.1E-65 | ||
| PANTHER | 16 | 773 | 758 | 1.2E-284 | – | |
| PANTHER | 16 | 773 | 758 | 1.2E-284 | – | |
| ProSiteProfiles | 17 | 158 | 142 | 25.572 | ||
| SMART | 18 | 158 | 141 | 5.7E-38 | ||
| Pfam | 19 | 188 | 170 | 2.9E-41 | ||
| SUPERFAMILY | 184 | 448 | 265 | 2.77E-66 | ||
| Gene3D | 192 | 349 | 158 | 1.3E-29 | – | |
| Pfam | 214 | 435 | 222 | 1.8E-26 | ||
| PRINTS | 221 | 236 | 16 | 3.9E-25 | – | |
| PRINTS | 297 | 311 | 15 | 3.9E-25 | – | |
| PRINTS | 389 | 403 | 15 | 3.9E-25 | – | |
| SUPERFAMILY | 425 | 531 | 107 | 3.81E-18 | ||
| Gene3D | 531 | 796 | 266 | 8.0E-31 | ||
| SUPERFAMILY | 541 | 787 | 247 | 5.78E-32 | – | |
| PRINTS | 695 | 711 | 17 | 3.9E-25 | – | |
| PANTHER | 849 | 959 | 111 | 1.2E-284 | – | |
| PANTHER | 849 | 959 | 111 | 1.2E-284 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi6g1v0183700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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