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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0193000 |
| Transcript ID | LotjaGi6g1v0193000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K1I4|K7K1I4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0193000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48913913..48919109) extracted from Lotus japonicus Gifu genome v1.2.
CAATTTCACGTCATACTTAGAGAAATGAGAATAGGAAAAGAGAAAAATGGGATATATAAGTGATTGTGACGATAAAATAA AAGATCGAGATAAATAAAAAATGAATAAAATAAAATAGAAGAGAAAATGAATGTGAATATATCACAGTTGGAATTTCAAC AACTTACTTTTATTCTTCTTATTCACTATATATTATAATTAATCTTATTATAAAGTGATAAACGGACACAATAACATGAT TAGATAAACATTGGTAAAAATATGTATCTTCATGTTCATGGAGCAGATGAGACACACTTACTGTGAAGTGTGAAGCAATT CTCACGTAGTCACTAGCTACTAGGCAATTTCGTAGTCAACAAGTCAATAGACAGGAAACGCGTTGCTGAGAGAGAGAGAG AGAGAGAGTGTAAGTAGGGACCAGACCTGCAGGTATGAATGAAATTATGAACAATCATGCTTCACAGTTGACTAGAGTAG AACCACTACTTGACTTGCAACCCTGCATACTATAGTGCTTCACAGCTCCCTAAGCAATTACCTTCAAACTTCTTCCTTGT TTCAATCATCTTCAGACAACCAACCAATCTCGTTGATATTAGTACTGAGAATTGAACCAAATTAACTATCAATTTTGCTG CTTCTTCATCATCATCTAGCCTTCCTCTTCATCTTACTCAGAAAAATATATTGTCATGGAGGATAACCACCAAATCATCA ATTTTGCTCCTTCTTCTTCATCTTCTGTGATGTCTCTGAAAAAATATGATGTTTTTCTTAGCTTTCGTGGTGAAGATACT CGAGACAACTTCACCAGCCATCTTTATGATGCTCTCCAAAAGGAAGTGGAGACCTACATAGACTACAGGCTTGACAAGGG AGATGATATCTCACAAGCACTCATCAAAGCCATACAAGACTCACTTGTATCTGTTGTCATCTTCTCTGAAAACTATGCTT CCTCCAAGTGGTGCTTGGATGAGATCAGCGTGATTCTTCAATGCAAGAGAGATCATGGACAAATTGTAATACCTGTGTTC TATAAAGTAGATCCTTCACATGTCAGGAAGCAGACAGGGAGCTACAAGGAAGCTTTTGCAAAGCATGAGCAAGATCTGAA CAACAGTGATGATGACAAGTTGCAGAAATGGAGATGTGCACTCAGAGATGCAGCCAATTTGGCAGGGTGGGACTCTCAGA GTTTTAGGTACTACTATATATCCTCAAAACTCTACCTTTCTTCTTGATAAATATTACTTCTAGTATATCAAATCATAAGA TATTGATGGTGTCTTCTGGTGTTGTTGAATTGAATTTTATGCAAGTTTAAATGATTAATATCTACTATTGTAATATTCAT TCCTCTGTATTTTCACGATTTCATCCTTGCTTTTTATTTTGATTGATTTGTGATACAGTTTTTCCTTAACTCCTATCATG CTTTAATGCTAGGAATGAATCTGAATTCATTAAGGACATTGTTAAAGATGTTTTACAAAAACTGAATATCAGATACCCAG TGGAATTGAAGGGATTAGTTGGAATAGAGGAAAATTATGCAGGGGTTGAATCATTATTGAAAATTGGCTCAATTGATGAT GTTCGAGTGGTTGGAATATGGGGCATGGGTGGCATAGGGAAGACCACACTGGCGCGTGCTTTGTATGCCAAGTTGTCTAT TCAATTTGAAGGTCATTGCTTCCTCAAAAGTGTAAGGGAACAATCAGAAAAGAAGGGTTTAGATGCTTTGCGCAACAAAC TTTTTTCTGAGTTGTTAGGAGAAAAAAATCTTCAAGTTGAGTCCCCTTATGTGATGAGAAGGCTTGCACGTAAGAAAGTT CTTATTGTTTTGGATGATGTGGCTACCTCTCAACAGTTACAAGAACTCATCACTGATTATTACTGTTTGGCACCAGGAAG TAGAGTGATTGTAACGACTAGAGACAAACACATAATTAGTCAGGTGAATGGTATATATGAGGTCAAGGAACTGAATTACC ATGACTCTCTTCACCTTTTCTACTTGAATGCCTTCAAAGAAAAGTGTCTTGATGGATATGAAGAGCTATCAAAATGTGTG ATTGCATATTGCAAACGAAATCCTTTGGCTTTAAAAGTCTTGGGTGCACGTCTTCGATCAAAGAGTATAGATGTGTGGAA AAGTGAATTGAAAAAGCTCTGCAAGATTCCAGACGTGAATATTCATAATGTCTTGAAATTGAGTTTTGATGGCTTGGATT CTGATGAGAAGAACATATTTCTAGATATTGCATGCTTCTTAAAAGGAGAATCTAGAGATTACGTGACAAGTCTACTAGAT GCTTGTGGTTTCTTTCCCGATGTTGGGATAGAAGACCTTATAGATAAGTCTCTTTTAACTGTTTCAAATGAGGGTCATAT AGAAATGCATGACTTGATACAAGAAATGGGTTGGAATATTGTTCGTCAAGAATTTGATAAAGACCCTGGACGACGAAGTC GATTGTGGGATCCCGAGGAAGTGTTTGATGTATTGAAAAATAATAAGGTTAGCGCAAATTAAAATTACTCATCTTTGAAT TAATAAAATTTCATGTGTGTGTGGAATGTAGCTATTATTATAACATTTACTACTTACTATTCTCTTTTTGTTTTGTCAGG GAACTGAATCTGTAGAAGGCATAATTTTAAATGTGTCCAAAATTAGAAAGGATTTACATTTGGGCTTTAGTTCCTTCACA AAAATGACTGAAGTAAGAATTCTTAAATTCTATTATGGTAGGTGGAGTAAAGAATGTAAGATATACCTTCCTAATGGTCT TGACTCATTGTCTGACAAATTGAGACTCCTTGAATGGCATCGATACTGTTTGGAGTCTTTGCCATCAACCTTTTGTGCTG AAAAGCTGGTTAAGCTTGTCATGTCACGCAGCAACCTTAAAAAGCTTTGGGATGAAGTTCAAGTAAGAATGTGTCTATAT TAAATATATTCTGGTTTTGTTTTCAACTTTTTGCAGTTTTTGTTGGTAATATTGTAGAGGTGGAAATAGAGGCTAACACA TAGAAAGATTCTCTGCATAACCTAGCAAAAAATTAGAGTTTTAGAGAATTATTTAGTGGTTGAGTTCTTTAGTATTTCAC TTGTTATATTTTGCATCTCATAAACATGTACTTATAACATACTGAGTGAATGTTACAATAATCAAAGAGTCCACTCGCCA CTAGTTGTTTAATGCCTACTTAATCACTCTAGTGAGCATTAAACATCTCCACTAACATCAATAGCAATAAACCCATGATT CTTCACTCACAATCATTAACTTCCATAACAACACATTCCTGAACACTTTTTTTGGAGGGAGTTACTACCTCGTGCTTCCT GAGGTGAAACCCATGCACTGGACAGTGTATGAGTGATTTCCATATATATGCTTACATATCTTCTCTCATTTATTACAGAA TCTTGTGAATTTAAAGGAAATTGACCTTACATGCTCCAAAGACCTGGTTGAGCTCCCAGACTTAACTCATGCTACAAATC TTGAAGTATTACGTCTTGGGAAATGTATAAGTTTGCGTGAAGTTCATCCATCCATTTTATCTCTCCCCAATCTTTGGGAT CTGAATTTACGTTGTTGCACCAAGATTGAAAGCCTTGAAAGTGAGGTCCATTCAAAATCTCTTCGCACAATCAACCTCCG CAACTGCTCATCCCTAAAGAAATTCTCAGTCTTCTCTGAGAAATTGGAGGAATTGTGGTTAGATGATACAGCTATCCAGG AACTACCCTCGTCAATTTGGCGTTGTGAGAAACTTAGGGACTTGAGTCTAATGGGGTGTGACAATCTTAAGAGTTTTGGG ATTGGGAGCAAGTCATCTCATGATCCAGTAAATGCATCTCTTGTGTCTCTAAACCTTTCTGGGTGCAAATTAGTGAATGA ATCCAATCTAAGTTTAATCCTTGATGGTATGCGGTCTTTATCTGAGTTGTATTTGGAAGATTGTTGCAACTTACGAGCAC TCCCTGACTCCATTGGCTCGTTAACATCGTTGGAGTCGTTAGACCTAAGTGGAAGCATTAATGTTGAGATGTTGTCTCTA AACATCAAGAACCTTTTGAAGCTAGAATATCTTTGGTTATACAATTGCAGGAAACTTGTGTCTCTGCCAGAGCTTCCACC TTCCCTGGTGGTGTTACCTGCCACTATCTGCCTAGAGTTACGAGCACTCGCTGACATGAAGAACCTTTTGAAGCTAGAAG ATCTTTGCTTAGACAATTGCAGGAAACTTGTGTCTCTGCCAGAGCTTCCACCTTCCCTGATAAGGTTGCCGTCAACTGCA CATCTCTGGAGACCAACTTCAGTACTCAATTGTTGTCGGTGGAAATACAGATGATCATGGTGGATATGTTATGGTCCGTG GATCCCAAGTTCCTGACATGTGTATGTTTGGTGGTGAAGGGGATTCAATAACTTTTCCGCAACTTGCAAATTCTGAAAAC ATATGCCGCATTATTTGTTGCCTGGTACGGCAAGGCTACAGTGGAAGAGTGCGATATCGGATCAACAAAACATCCCACAT ACGATGATTGGCGTACTTTGTTTTATCATGACGGTGACACTTCCATTTTGGATGATCATCTAGTTCCTATGATGCACGGG TACTCCAAAAATCGCATTGTACCCGTACCGGGTACGTACCCGGTACGGGTACGCCATGGGTACGCCGTGGGTACGTACCA GGTACGTACCCAAGTCCACCAAAAAAAAAAACTGGGGTACGTTTTTGGGTACGCCACGGGTAGGTTTGGGTACGTCCGTG GGTACTCCGGATACTTTTTTTTTTAAAAAAAAAATTTGTTCAAAACTACCTCGTTTTTGTTCACTGATGATGGAGAAGGG AATGATGATACCATTACTGTTTGAGAGAGCTTTGATTTTGTATTGTTGGTTGTTGAACAATCTATCGTTTAATTGTTTTG TTGTGTTGAACAATCGTATTGTCTCTTTTGTACTATTTTAATTTGTGTTACTGTCTATGTTGAACAATCTTATGTTATGT CTCTTCAATGTTACTCAATCTTATGTTATGTTTCTTCAATCTTAAGATTATCTATGACGGTATGTGTTTGAAGATATATG TTAAGGTATTACATATTCTTTTGATAGTTTTCATTAGGTTGTGATGGTTTTTATGTTGGTCTTTCATATCAGTATTG
CDS sequence (LotjaGi6g1v0193000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGATAACCACCAAATCATCAATTTTGCTCCTTCTTCTTCATCTTCTGTGATGTCTCTGAAAAAATATGATGTTTT TCTTAGCTTTCGTGGTGAAGATACTCGAGACAACTTCACCAGCCATCTTTATGATGCTCTCCAAAAGGAAGTGGAGACCT ACATAGACTACAGGCTTGACAAGGGAGATGATATCTCACAAGCACTCATCAAAGCCATACAAGACTCACTTGTATCTGTT GTCATCTTCTCTGAAAACTATGCTTCCTCCAAGTGGTGCTTGGATGAGATCAGCGTGATTCTTCAATGCAAGAGAGATCA TGGACAAATTGTAATACCTGTGTTCTATAAAGTAGATCCTTCACATGTCAGGAAGCAGACAGGGAGCTACAAGGAAGCTT TTGCAAAGCATGAGCAAGATCTGAACAACAGTGATGATGACAAGTTGCAGAAATGGAGATGTGCACTCAGAGATGCAGCC AATTTGGCAGGGTGGGACTCTCAGAGTTTTAGGAATGAATCTGAATTCATTAAGGACATTGTTAAAGATGTTTTACAAAA ACTGAATATCAGATACCCAGTGGAATTGAAGGGATTAGTTGGAATAGAGGAAAATTATGCAGGGGTTGAATCATTATTGA AAATTGGCTCAATTGATGATGTTCGAGTGGTTGGAATATGGGGCATGGGTGGCATAGGGAAGACCACACTGGCGCGTGCT TTGTATGCCAAGTTGTCTATTCAATTTGAAGGTCATTGCTTCCTCAAAAGTGTAAGGGAACAATCAGAAAAGAAGGGTTT AGATGCTTTGCGCAACAAACTTTTTTCTGAGTTGTTAGGAGAAAAAAATCTTCAAGTTGAGTCCCCTTATGTGATGAGAA GGCTTGCACGTAAGAAAGTTCTTATTGTTTTGGATGATGTGGCTACCTCTCAACAGTTACAAGAACTCATCACTGATTAT TACTGTTTGGCACCAGGAAGTAGAGTGATTGTAACGACTAGAGACAAACACATAATTAGTCAGGTGAATGGTATATATGA GGTCAAGGAACTGAATTACCATGACTCTCTTCACCTTTTCTACTTGAATGCCTTCAAAGAAAAGTGTCTTGATGGATATG AAGAGCTATCAAAATGTGTGATTGCATATTGCAAACGAAATCCTTTGGCTTTAAAAGTCTTGGGTGCACGTCTTCGATCA AAGAGTATAGATGTGTGGAAAAGTGAATTGAAAAAGCTCTGCAAGATTCCAGACGTGAATATTCATAATGTCTTGAAATT GAGTTTTGATGGCTTGGATTCTGATGAGAAGAACATATTTCTAGATATTGCATGCTTCTTAAAAGGAGAATCTAGAGATT ACGTGACAAGTCTACTAGATGCTTGTGGTTTCTTTCCCGATGTTGGGATAGAAGACCTTATAGATAAGTCTCTTTTAACT GTTTCAAATGAGGGTCATATAGAAATGCATGACTTGATACAAGAAATGGGTTGGAATATTGTTCGTCAAGAATTTGATAA AGACCCTGGACGACGAAGTCGATTGTGGGATCCCGAGGAAGTGTTTGATGTATTGAAAAATAATAAGGGAACTGAATCTG TAGAAGGCATAATTTTAAATGTGTCCAAAATTAGAAAGGATTTACATTTGGGCTTTAGTTCCTTCACAAAAATGACTGAA GTAAGAATTCTTAAATTCTATTATGGTAGGTGGAGTAAAGAATGTAAGATATACCTTCCTAATGGTCTTGACTCATTGTC TGACAAATTGAGACTCCTTGAATGGCATCGATACTGTTTGGAGTCTTTGCCATCAACCTTTTGTGCTGAAAAGCTGGTTA AGCTTGTCATGTCACGCAGCAACCTTAAAAAGCTTTGGGATGAAGTTCAAAATCTTGTGAATTTAAAGGAAATTGACCTT ACATGCTCCAAAGACCTGGTTGAGCTCCCAGACTTAACTCATGCTACAAATCTTGAAGTATTACGTCTTGGGAAATGTAT AAGTTTGCGTGAAGTTCATCCATCCATTTTATCTCTCCCCAATCTTTGGGATCTGAATTTACGTTGTTGCACCAAGATTG AAAGCCTTGAAAGTGAGGTCCATTCAAAATCTCTTCGCACAATCAACCTCCGCAACTGCTCATCCCTAAAGAAATTCTCA GTCTTCTCTGAGAAATTGGAGGAATTGTGGTTAGATGATACAGCTATCCAGGAACTACCCTCGTCAATTTGGCGTTGTGA GAAACTTAGGGACTTGAGTCTAATGGGGTGTGACAATCTTAAGAGTTTTGGGATTGGGAGCAAGTCATCTCATGATCCAG TAAATGCATCTCTTGTGTCTCTAAACCTTTCTGGGTGCAAATTAGTGAATGAATCCAATCTAAGTTTAATCCTTGATGGT ATGCGGTCTTTATCTGAGTTGTATTTGGAAGATTGTTGCAACTTACGAGCACTCCCTGACTCCATTGGCTCGTTAACATC GTTGGAGTCGTTAGACCTAAGTGGAAGCATTAATGTTGAGATGTTGTCTCTAAACATCAAGAACCTTTTGAAGCTAGAAT ATCTTTGGTTATACAATTGCAGGAAACTTGTGTCTCTGCCAGAGCTTCCACCTTCCCTGGTGGTGTTACCTGCCACTATC TGCCTAGAGTTACGAGCACTCGCTGACATGAAGAACCTTTTGAAGCTAGAAGATCTTTGCTTAGACAATTGCAGGAAACT TGTGTCTCTGCCAGAGCTTCCACCTTCCCTGATAAGGTTGCCGTCAACTGCACATCTCTGGAGACCAACTTCAGTACTCA ATTGTTGTCGGTGGAAATACAGATGA
Protein sequence (LotjaGi6g1v0193000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDNHQIINFAPSSSSSVMSLKKYDVFLSFRGEDTRDNFTSHLYDALQKEVETYIDYRLDKGDDISQALIKAIQDSLVSV VIFSENYASSKWCLDEISVILQCKRDHGQIVIPVFYKVDPSHVRKQTGSYKEAFAKHEQDLNNSDDDKLQKWRCALRDAA NLAGWDSQSFRNESEFIKDIVKDVLQKLNIRYPVELKGLVGIEENYAGVESLLKIGSIDDVRVVGIWGMGGIGKTTLARA LYAKLSIQFEGHCFLKSVREQSEKKGLDALRNKLFSELLGEKNLQVESPYVMRRLARKKVLIVLDDVATSQQLQELITDY YCLAPGSRVIVTTRDKHIISQVNGIYEVKELNYHDSLHLFYLNAFKEKCLDGYEELSKCVIAYCKRNPLALKVLGARLRS KSIDVWKSELKKLCKIPDVNIHNVLKLSFDGLDSDEKNIFLDIACFLKGESRDYVTSLLDACGFFPDVGIEDLIDKSLLT VSNEGHIEMHDLIQEMGWNIVRQEFDKDPGRRSRLWDPEEVFDVLKNNKGTESVEGIILNVSKIRKDLHLGFSSFTKMTE VRILKFYYGRWSKECKIYLPNGLDSLSDKLRLLEWHRYCLESLPSTFCAEKLVKLVMSRSNLKKLWDEVQNLVNLKEIDL TCSKDLVELPDLTHATNLEVLRLGKCISLREVHPSILSLPNLWDLNLRCCTKIESLESEVHSKSLRTINLRNCSSLKKFS VFSEKLEELWLDDTAIQELPSSIWRCEKLRDLSLMGCDNLKSFGIGSKSSHDPVNASLVSLNLSGCKLVNESNLSLILDG MRSLSELYLEDCCNLRALPDSIGSLTSLESLDLSGSINVEMLSLNIKNLLKLEYLWLYNCRKLVSLPELPPSLVVLPATI CLELRALADMKNLLKLEDLCLDNCRKLVSLPELPPSLIRLPSTAHLWRPTSVLNCCRWKYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 847 | 835 | 4.1E-260 | – | |
| PANTHER | 13 | 847 | 835 | 4.1E-260 | – | |
| SUPERFAMILY | 14 | 165 | 152 | 2.75E-39 | ||
| Gene3D | 18 | 185 | 168 | 3.0E-67 | ||
| ProSiteProfiles | 22 | 162 | 141 | 30.044 | ||
| Pfam | 23 | 193 | 171 | 1.2E-51 | ||
| SMART | 23 | 162 | 140 | 3.2E-42 | ||
| Gene3D | 186 | 348 | 163 | 6.5E-30 | – | |
| SUPERFAMILY | 188 | 443 | 256 | 5.67E-61 | ||
| Pfam | 219 | 413 | 195 | 3.1E-27 | ||
| SMART | 220 | 365 | 146 | 0.0071 | ||
| PRINTS | 223 | 238 | 16 | 1.8E-22 | – | |
| PRINTS | 294 | 308 | 15 | 1.8E-22 | – | |
| Gene3D | 354 | 433 | 80 | 3.7E-5 | – | |
| PRINTS | 384 | 398 | 15 | 1.8E-22 | – | |
| SUPERFAMILY | 489 | 926 | 438 | 1.58E-44 | – | |
| Gene3D | 525 | 722 | 198 | 6.2E-21 | ||
| Gene3D | 723 | 924 | 202 | 7.8E-28 | ||
| PRINTS | 823 | 839 | 17 | 1.8E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi6g1v0193000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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