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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0220000 |
| Transcript ID | LotjaGi6g1v0220000.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp|Q0WT48|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr|A0A151R9V4|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52326906..52332994) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGCTTCGGAGGAGACTAGTCAGCTGTTCCCGATATTCATACTGACAATAATGGCCATCCCCATAGTTCCGTATAC AATAACGAAGCTGTGTCGTTTTGCCTCTAAGAAATCAAAGAGCATCCACTGTCAGTGCTCTGAATGCTCGCGATCAGGGA AGTACCGTAAATCAATATTTCAGAGGGTGAGGTCGTTTTCCCCTACGTACATTTTGTATTTTAATGATTGCATTGTTATT TACTTTCACTTATTACCTCTCATTTCTCCTGATTTTAATTTTCCTTCCTGTGATTTTGCAGATTTCGAACGTCTCAACAT GGAGTAACTTTACATTGTTACTGCTTTGGGTGGTTATGATTATTCTGGTTTATTACATAAAGACTATGAATCGTGAGGTA AACAAGTCAAAGCTAAAATGAATTCAGTCATTCCACTACATGAGATATGAATTTTGTTATAAAGGATCTATTCTCTTAGT GTTTTAAATGATGCACGTTCTAAAATTTCTCCTGCAAAATTTATGCAGATTGAAATTTTCGATCCATTTAATATTCTTGG ATTAGAGCCTGGAGCACCAGAGTCTGAAATAAAGAAAAAATATAGGAGACTTTCCGTTCAATACCATCCAGATAAAAATC CAGATCCAGGTTGAAGGTCTTTCTGATGTTAAACATGTTTCTGATAGTTGCAAACTTTGATGTTTGTAAGAACGCGAGCT CCCTGCAGTTACTCCATGTGACTGATAGTTTTTATTTCTTTTAATTACAGAGGCGCATAAATACTTTGTTGAGCACATTG CTAAGGCTTATCAAGCTCTGACAGATCCAACAGCTCGTGAAAATTATGAAAAATATGGCCATCCTGATGGCAGGCAGGTA ATAAAACTAAACCGTGAGACAGTGATCTGGTGATTGTTGTCTTTTTGTTTTTATGCTGGTGAAATATGCATGATGTTTTA TTGCAGGGATTTCAAATGGGTATAGCTCTCCCTCAATTCCTGCTAAATATTGATGGGGCATCTGGTGGAATACTTCTAAT TTGGATTGTTGGTGTGTGCATTCTCTTGCCATTGGTCGTGGCTGTTGTTTATCTCTCCAGATCGTCAAAGTATTCCGGCA ACTATGTCATGCATCAAACACTTTCTACTTACTACTACCTCATGAAGCCTTCTTTAGCCCCCAGGTATATTCAGTGTTTA TGTTTATTTTAGTTATCAGAGTATCTTAGTTTTAGCTTAGTCAGCTGTTAACAACTGTATATTAACTGCAGTCTCTGCTA CATATAAGTTGCTGGCACCTGTTAGCGTCAGTAACAAATCAATTCAGTTAGGCTGTTATTTGGATATATGTAAACTGTAC ATCCAGTTAACAAGTTCAGTTGACTGGGCAAAATTTCATTATTGGGTCATCTCTCTATTTTCTATCATTTTCATTTACAT CCTGTCAATTTCTCTTGGCTTCTTGATTCTTAGAATTTGGGCTAGGCTAGCTCAAGGAATCCCAAGAGCTTGCTTATGAG GTGGTGATTGCCCAAGCTTTTATGAGGATTATTTGTCTTGTCTCTAGTTGATGTGCGATTGGGATCTTAACACCCTTCTC ATGACCAGTACTCAACATCTGGAGCATTGAGCTGTAGGCCTTTTCTTCCCCCTTCGGAAAGTCTTAGGGACATATTGATT TGATTATTGGAAACTAGGAAAGCTGTAGGGCCATGCTAATTTCATCGAGATAGTTGCATAGCCGCGAGGCCAGGTCGATT CTTGTACATCTGTGGATGGTACAATATTGCATCTAAAAGTTAGCTTGTGAAATGAGAATTGTTTGAGCCTTTATTTACAC ACATGTGATTCTTTCTTTGGGTTTTACTGGAGGACTATCATGCCTTCAGTACCTCCATCAACAATAGGTTGATCCATGAG GTCAAAGAGATTGAAACCCTGTCCTAACTTAGTGCACATCTGGAAGCATTGACAAGCCAACCTGGCCAATGTACTATTGT CTATTGGTCAATATTGCACGAGGAACACCCATTACACTTAAGTTCACAGGTCACACACTCAACCTGCTCCAGTTTGTCAT CAAGTTGCAACAAGGCCTTGTTTGCCTCCTTTCCTTTGTGGGAACATTTGGCTAATTATTTTCCTATTTCATCTGATTGA TTTCCCTATATCTATAGATCATCATTAGGTGGATGTTGTGGCATTTTTTCTCATGGTTGAGGTGGTCGATATGGCCATTT TTGTGTAAGAGGTGTCGAAGCTGGATTTCATGGGCTAGTGGAGTGTCAGGTGTTCCCCAAGAATGAATGGGGATAATGTT TTAGTTAGCTACATTGGTTCTATCAGGACTTCAATCCTTCTTTGCCTTGATACGTTCCAGCAACTCTTTCAGCTTCTGGT GCTTTTCTAGTACCTTGACAAATGGTTCATAGCCTCCTCGGTCTTCTGCTCCACCACTTCTGCAATCTCCATATCTGCCA TATCTTTTTACCTACCTATCCTCTCATAGAAGGATAGTATGGACCACAATCAGGACCATCTGTAACTCTCTACTTTGGTT CTGAGGATATAGAGAAGCTAGTTTTATGCAGACAGACAACCATTGAATATTTGCGTTCATTAGCTTTTGTAATCAGTGTG TTCTTATTGTTGAATCAGGTTGAAGTTGATTGAGAATTATCACCTTGTGAATTTATGTTTGTCAGCAAACTGCATGTTTG TATAGATTTGTAAATTGTCTTCCATTTTGAACTTGCCCAAGATTGAATTACGGCATCATGTTGATGAAATATTGAGATTT AAAATAACTACTTATCAGGGATTGAAGAGAAAACAGTGAAGTCGCACATTATTTTATTTAACTTATTTTATGACAGTACG AGAATCCCCCCCCCCCCCCTCACCCCCACCCAAATCCATGTTTATAGTAGATACTTATTTTTAATTGTGGTATTATGTTA TACAGCAAAGTCATGGATGTCTTTACAAAGGCTGCTGAATACATGGAAATTCCAGTTCGTAGGACTGATGATGAACCTCT TCAGAAGCTTTTTATGTTGGTGAGGAGCGAGTTGAATCTTGACCTAAAAAACATTAAGCAGGAGCAGGCTAAGTTTTGGA AGCAGCATCCTGCACTGGTTAAGGTATCTTCTTGTATAGCTAAACCAATTAAAGTATTCTTCTTTTATCTGTACGTGATT GTTCGATTCTATTCCTCATAGTCCTTTATGTCCTCACACCTATGCTATTTTCTTTCAGACTGAGCTGTTGGTTCAAACTC AGTTGACTCGTGAATTTGCAGCTTTGTCTCCATCTTTACAAAGTGATTTCAGAAGAATTTTAGAGACAGCACCTCGCCTT CTTGAAGAACTAATGAAGGTGACAGACTAAATAATTAGTTTTCTATTCAAGTTTGCTCAGCCTTTTGCGAATTTTAATGG TATTTCAGAAGTTGCATCGATAAAGAAATGTTGAAACACTAAATTTTTAGAAATTACTCTATACAGACAAAATCATCCAC CGCGCGGGCTTGAGGATTAATATTTATGTTTAGTCTTAGACACTTGTCAAACTTGAATGTTTTGCATATATGATGTTATA TCATGAAAGGAACTAAATAGTTGTTGTAACTAATTTTATGAGATGCATAGTTTCTGTTATTGATAGATTGACCCCAAGAA TAATGTTATGTGTTGAAATCTTATTGAGTAACTCAATCGGGAATGACTTGGAAAACATATAATCATGTGCTGAAATTTAC AGGACCAAATACCTACATGAATGATGTACCATGTTTGTGCATTATGCCTCAATTTTTCCTTGTCATCGTCTCTTATATGA TGGATATGGTATTTATGTTTCTGGATTTATAGTTATGAGTATGTGCTATTTGTATTTGAACATGATTTAATTTAATGCTC TACTTTCTGTAAAAGATGGCACTTCTACCACGCACTGCTCAAGGGCACGGGTGGCTGAGACCTGCAATCGGTGTTGTTGA GCTTTCTCAATGCATCATCCAGGTAACAAATATATGCTGATCTAAAGTATAATCTGCTAGTATTCAGTCACTTTGGTTTC CATGTTAAATTAAGTTACAGATTAGTCTCACTGTACCAAATACTGTGGGATAGTATTCATGTTATTCCTTATTCTCATTT ATTTGTAAGTTGCAATTGGTTCTTTTGGACTATACTTAATGTTCTTTTGTATTTTACTTCAATTATTATTTGTGATTTTT ATTTGTAAGAACAATTGAAAAGTGCTTCTGCTTAACATTGTAGATCCTTCAATTAAAATGAGAATCGAAAGTTTTTGGTT TTTTCTTCTATTATGTTTTGGTTCTTTTGCTGATGCCTATTAGTTTAATGTGATCTCTTCAAGAACTAGGAGGTTGGGTT ATGTGGTACAAATGTGTTACTTCTATTGATGTGTTATCACTTAAGGCTAAAAAAATGCCTTGGTGGTGAATTGGAATTAA GTTGTGCATTTCTTTTTTGGTTATGTTTGTTTTTCTTGTTTAGCAATGTAGTCTTGCTGAATATATCAGAATTAATATCT TTGCCTTTTCCTTGATATAAAACAATTTTAATTTGCGGGTTTCTTTTCTTTATGTAGGCCGTTCCTCTCAGCGCTAGAAA GACTACTGGTGGATCACCAGAAGGCAGTGCCCCATTTCTTCAGCTGCCACATATTAGTGAGACTGTTATTAAGAAAGTGG CCCGCAAGGTATGGCCAAATGTAAATGGTTAAATTTCCCTAGTTTTGATGCTCATGTCTTGTGCTATTCTCTGTTGTTAC ATGGTCGAAGATCTTGAGACTTGATCGTAGAGTTAACATATTGGCAAACCTTTTAGGAACATATTTCCAGGGGATCAAAT GTAGCTAGTCACTTACTAGTTAGCTACTCGTTGGATCCACTTTTTTGAATTTTGACTTCAGCCACCCTTTCTTGAGATTG ATAAAAGGAAATTATTTGTATGGGCTTCTTATTAATTTGATAGGATCTAGTGGCTGAATTACTAGTTCTGTGAAATTACT GATCCTATTTTATTTTTACAAGAACTGCAGAGCTATCTCTGTTCTGCAGAACTAGCCCGAAGTTGTATACAACTATATAT TGTATAGTGACTAGTGACTACTGACTGTTTGAAATTCAAATGTTGTATTTCCTTTTTATTTCTGGGTCTTCAGAATTTCC TATTTGATCTCATGCTCACGAGTTGGAGCTAAGTTTTTTCCTTCTTGATATGCAGAAGGTGAGAACATTTCAGGAACTTC ATGACATGGACCCACAGGAACGAGCTGAGCTGCTTATTCAAACAGGTGGTTTATCTTCTGCTGAAGTGCAAGACATTGAG GTGGTACTGGATATGATGCCTTCCATTACACTTGACGTAACTTGTGAGACTGAAGGTGAAGAGGGTATGCAAGAGGGTGA CATTGTGACTTTACATGCTTGGATAAATGTTAAGAGGGGTAATGGCCTGATCGGTGCCCTTCCGCATGCCCCCTACTACC CATTTCACAAGGAAGAGAATTTCTGGTTTTTGCTTGCGGATTCTGTTTCGAATAATGTGTGGTTTTTCCAGAAGGTTAGT TTCTTGGATGAAGCTGCTGCTATAACTGCTGCATCTAAGGCAATTGAGGAATCTAAGGAGGGGTCAGGGGCAACTGTGAA GGAGACCAGCAAGGCAGTTGCAGAAGCAGTTGAGAAGGTGAAGGCGGGGTCTAGATTGGTAATGGGCAAGTTCCAGGCCC CATCAGAGGGTAACTACAATTTGACTTGCTATTTATTGTGTGACTCTTGGTTGGGTTGTGACAGAAGGACAAATGTAAAG CTCAAAATTGTGAAACGGACTCGGGCTGGCACCAGGGGGGCTGTTTTGGCTGACGAAGGACCTATCATGGAGGATGGGGT TGAGGAGGACGAGGATAATGAGGATGAAGAGTACGATGATGACTATGAGAGTGAGTACAGTGAAGATGAAGAAGATGATC AGAACTCAAAAAATAAGCATCAAGCTACCAATGGCACTGCGAAAAAACATGGTCAAGCTGCTGAAAGTTCAGGCTCGGAT GAAGAATGA
CDS sequence (LotjaGi6g1v0220000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCTTCGGAGGAGACTAGTCAGCTGTTCCCGATATTCATACTGACAATAATGGCCATCCCCATAGTTCCGTATAC AATAACGAAGCTGTGTCGTTTTGCCTCTAAGAAATCAAAGAGCATCCACTGTCAGTGCTCTGAATGCTCGCGATCAGGGA AGTACCGTAAATCAATATTTCAGAGGATTTCGAACGTCTCAACATGGAGTAACTTTACATTGTTACTGCTTTGGGTGGTT ATGATTATTCTGGTTTATTACATAAAGACTATGAATCGTGAGATTGAAATTTTCGATCCATTTAATATTCTTGGATTAGA GCCTGGAGCACCAGAGTCTGAAATAAAGAAAAAATATAGGAGACTTTCCGTTCAATACCATCCAGATAAAAATCCAGATC CAGAGGCGCATAAATACTTTGTTGAGCACATTGCTAAGGCTTATCAAGCTCTGACAGATCCAACAGCTCGTGAAAATTAT GAAAAATATGGCCATCCTGATGGCAGGCAGGGATTTCAAATGGGTATAGCTCTCCCTCAATTCCTGCTAAATATTGATGG GGCATCTGGTGGAATACTTCTAATTTGGATTGTTGGTGTGTGCATTCTCTTGCCATTGGTCGTGGCTGTTGTTTATCTCT CCAGATCGTCAAAGTATTCCGGCAACTATGTCATGCATCAAACACTTTCTACTTACTACTACCTCATGAAGCCTTCTTTA GCCCCCAGCAAAGTCATGGATGTCTTTACAAAGGCTGCTGAATACATGGAAATTCCAGTTCGTAGGACTGATGATGAACC TCTTCAGAAGCTTTTTATGTTGGTGAGGAGCGAGTTGAATCTTGACCTAAAAAACATTAAGCAGGAGCAGGCTAAGTTTT GGAAGCAGCATCCTGCACTGGTTAAGACTGAGCTGTTGGTTCAAACTCAGTTGACTCGTGAATTTGCAGCTTTGTCTCCA TCTTTACAAAGTGATTTCAGAAGAATTTTAGAGACAGCACCTCGCCTTCTTGAAGAACTAATGAAGGATGTACCATGTTT GTGCATTATGCCTCAATTTTTCCTTGTCATCGTCTCTTATATGATGGATATGATGGCACTTCTACCACGCACTGCTCAAG GGCACGGGTGGCTGAGACCTGCAATCGGTGTTGTTGAGCTTTCTCAATGCATCATCCAGGCCGTTCCTCTCAGCGCTAGA AAGACTACTGGTGGATCACCAGAAGGCAGTGCCCCATTTCTTCAGCTGCCACATATTAGTGAGACTGTTATTAAGAAAGT GGCCCGCAAGAAGGTGAGAACATTTCAGGAACTTCATGACATGGACCCACAGGAACGAGCTGAGCTGCTTATTCAAACAG GTGGTTTATCTTCTGCTGAAGTGCAAGACATTGAGGTGGTACTGGATATGATGCCTTCCATTACACTTGACGTAACTTGT GAGACTGAAGGTGAAGAGGGTATGCAAGAGGGTGACATTGTGACTTTACATGCTTGGATAAATGTTAAGAGGGGTAATGG CCTGATCGGTGCCCTTCCGCATGCCCCCTACTACCCATTTCACAAGGAAGAGAATTTCTGGTTTTTGCTTGCGGATTCTG TTTCGAATAATGTGTGGTTTTTCCAGAAGGTTAGTTTCTTGGATGAAGCTGCTGCTATAACTGCTGCATCTAAGGCAATT GAGGAATCTAAGGAGGGGTCAGGGGCAACTGTGAAGGAGACCAGCAAGGCAGTTGCAGAAGCAGTTGAGAAGGTGAAGGC GGGGTCTAGATTGGTAATGGGCAAGTTCCAGGCCCCATCAGAGGGTAACTACAATTTGACTTGCTATTTATTGTGTGACT CTTGGTTGGGTTGTGACAGAAGGACAAATGTAAAGCTCAAAATTGTGAAACGGACTCGGGCTGGCACCAGGGGGGCTGTT TTGGCTGACGAAGGACCTATCATGGAGGATGGGGTTGAGGAGGACGAGGATAATGAGGATGAAGAGTACGATGATGACTA TGAGAGTGAGTACAGTGAAGATGAAGAAGATGATCAGAACTCAAAAAATAAGCATCAAGCTACCAATGGCACTGCGAAAA AACATGGTCAAGCTGCTGAAAGTTCAGGCTCGGATGAAGAATGA
Protein sequence (LotjaGi6g1v0220000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASEETSQLFPIFILTIMAIPIVPYTITKLCRFASKKSKSIHCQCSECSRSGKYRKSIFQRISNVSTWSNFTLLLLWVV MIILVYYIKTMNREIEIFDPFNILGLEPGAPESEIKKKYRRLSVQYHPDKNPDPEAHKYFVEHIAKAYQALTDPTARENY EKYGHPDGRQGFQMGIALPQFLLNIDGASGGILLIWIVGVCILLPLVVAVVYLSRSSKYSGNYVMHQTLSTYYYLMKPSL APSKVMDVFTKAAEYMEIPVRRTDDEPLQKLFMLVRSELNLDLKNIKQEQAKFWKQHPALVKTELLVQTQLTREFAALSP SLQSDFRRILETAPRLLEELMKDVPCLCIMPQFFLVIVSYMMDMMALLPRTAQGHGWLRPAIGVVELSQCIIQAVPLSAR KTTGGSPEGSAPFLQLPHISETVIKKVARKKVRTFQELHDMDPQERAELLIQTGGLSSAEVQDIEVVLDMMPSITLDVTC ETEGEEGMQEGDIVTLHAWINVKRGNGLIGALPHAPYYPFHKEENFWFLLADSVSNNVWFFQKVSFLDEAAAITAASKAI EESKEGSGATVKETSKAVAEAVEKVKAGSRLVMGKFQAPSEGNYNLTCYLLCDSWLGCDRRTNVKLKIVKRTRAGTRGAV LADEGPIMEDGVEEDEDNEDEEYDDDYESEYSEDEEDDQNSKNKHQATNGTAKKHGQAAESSGSDEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 685 | 685 | 2.4E-289 | – | |
| PANTHER | 1 | 685 | 685 | 2.4E-289 | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 12 | 32 | 21 | - | – | |
| Phobius | 33 | 65 | 33 | - | – | |
| Phobius | 66 | 88 | 23 | - | – | |
| TMHMM | 66 | 88 | 23 | - | – | |
| Gene3D | 88 | 174 | 87 | 1.5E-21 | ||
| Phobius | 89 | 190 | 102 | - | – | |
| SUPERFAMILY | 95 | 192 | 98 | 1.7E-23 | ||
| SMART | 98 | 156 | 59 | 3.5E-22 | ||
| Pfam | 99 | 161 | 63 | 2.5E-19 | ||
| CDD | 99 | 153 | 55 | 2.58395E-20 | ||
| ProSiteProfiles | 99 | 164 | 66 | 18.669 | ||
| PRINTS | 101 | 119 | 19 | 7.3E-13 | ||
| PRINTS | 119 | 134 | 16 | 7.3E-13 | ||
| PRINTS | 136 | 156 | 21 | 7.3E-13 | ||
| PRINTS | 156 | 175 | 20 | 7.3E-13 | ||
| Phobius | 191 | 213 | 23 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| SMART | 209 | 626 | 418 | 6.5E-7 | ||
| Phobius | 214 | 343 | 130 | - | – | |
| Pfam | 220 | 340 | 121 | 1.7E-10 | ||
| Gene3D | 242 | 395 | 154 | 6.2E-25 | – | |
| SUPERFAMILY | 243 | 472 | 230 | 3.4E-24 | – | |
| Phobius | 344 | 362 | 19 | - | – | |
| TMHMM | 344 | 366 | 23 | - | – | |
| Phobius | 363 | 707 | 345 | - | – | |
| Pfam | 365 | 624 | 260 | 7.7E-12 | ||
| Gene3D | 410 | 468 | 59 | 4.0E-6 | – | |
| Gene3D | 472 | 570 | 99 | 9.4E-7 | ||
| SUPERFAMILY | 476 | 629 | 154 | 9.8E-21 | ||
| Gene3D | 571 | 629 | 59 | 5.3E-8 | ||
| MobiDBLite | 640 | 707 | 68 | - | – | |
| MobiDBLite | 647 | 676 | 30 | - | – | |
| MobiDBLite | 684 | 698 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0220000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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