Domain Predictions — View

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PTHR24075

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v0966400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like [Glycine max] gi\|356556951\|ref\|XP_003546783.1\|	Domains Coil G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR000008 IPR001650 IPR003593 IPR004179 IPR011545 IPR011991 IPR014001 IPR014756 IPR027417 PF00270 PF00271 PF02889 PIRSF039073 PS51192 PS51194 PTHR24075 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd00046 cd00079 mobidb-lite	32
Lj6g3v1139660.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: translocation protein SEC63 homolog [Glycine max] gi\|356530479\|ref\|XP_003533808.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR000008 IPR001623 IPR004179 IPR014756 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF0 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	25
LotjaGi3g1v0141500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent helicase hrq1; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|G7IJ55\|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500	Domains G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 PF00270 PF02889 PS51192 PS51194 PTHR24075 PTHR24075:SF5 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18021 cd18795	28
LotjaGi3g1v0141500.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|G7IJ55\|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500	Domains G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR004179 IPR014756 IPR027417 IPR035892 IPR036390 PF02889 PTHR24075 PTHR24075:SF13 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18795	21
LotjaGi6g1v0220000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26
LotjaGi6g1v0220000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26
LotjaGi6g1v0220000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26
LotjaGi6g1v0220000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26
LotjaGi6g1v0220000.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	11.11