Domain Predictions — View

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SM00973

Source: SMART

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 19

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0354659.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: activating signal cointegrator 1 complex subunit 3 [Glycine max] gi\|356516857\|ref\|XP_003527109.1\|	Domains Coil G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR000008 IPR001650 IPR004179 IPR011545 IPR011991 IPR014001 IPR027417 PF00270 PF00271 PF02889 PS51192 PS51194 PTHR24031 PTHR24031:SF336 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 cd00046 cd00079	26
Lj0g3v0354659.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: activating signal cointegrator 1 complex subunit 3 [Glycine max] gi\|356516857\|ref\|XP_003527109.1\|	Domains Coil G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR000008 IPR001650 IPR004179 IPR011545 IPR011991 IPR014001 IPR027417 PF00270 PF00271 PF02889 PS51192 PS51194 PTHR24031 PTHR24031:SF336 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 cd00046 cd00079	26
Lj0g3v0354659.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: activating signal cointegrator 1 complex subunit 3 [Glycine max] gi\|356516857\|ref\|XP_003527109.1\|	Domains Coil G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR000008 IPR004179 IPR011545 IPR027417 PF00270 PF02889 SM00973 SSF158702 SSF52540 cd00046	14
Lj3g3v0966400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like [Glycine max] gi\|356556951\|ref\|XP_003546783.1\|	Domains Coil G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR000008 IPR001650 IPR003593 IPR004179 IPR011545 IPR011991 IPR014001 IPR014756 IPR027417 PF00270 PF00271 PF02889 PIRSF039073 PS51192 PS51194 PTHR24075 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd00046 cd00079 mobidb-lite	32
Lj5g3v2241240.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like [Glycine max] gi\|356525813\|ref\|XP_003531516.1\|	Domains G3DSA:1.10.3380.10 G3DSA:3.40.50.300 IPR001650 IPR004179 IPR011545 IPR011991 IPR014001 IPR014756 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00270 PF00271 PF02889 PS51192 PS51194 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 SignalP-noTM_EUK cd00046 cd00079	29
Lj6g3v1139660.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: translocation protein SEC63 homolog [Glycine max] gi\|356530479\|ref\|XP_003533808.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR000008 IPR001623 IPR004179 IPR014756 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF0 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	25
LotjaGi1g1v0188900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT5G61140.2 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9FNQ1\|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr\|K7KW51\|K7KW51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0188900	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 PF00270 PF00271 PF02889 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF16 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18020 cd18022 cd18795 mobidb-lite	35
LotjaGi1g1v0188900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT5G61140.2 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9FNQ1\|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr\|A0A0B2Q999\|A0A0B2Q999_GLYSO Activating signal cointegrator 1 complex subunit 3; Found in the gene: LotjaGi1g1v0188900	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 PF00270 PF00271 PF02889 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF16 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18020 cd18022 cd18795 mobidb-lite	35
LotjaGi3g1v0141500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A0L9UIS3\|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 IPR041094 PF00270 PF00271 PF02889 PF18149 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF12 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18019 cd18021 cd18795 mobidb-lite	37
LotjaGi3g1v0141500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A0L9UIS3\|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 IPR041094 PF00270 PF00271 PF02889 PF18149 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF12 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18019 cd18021 cd18795 mobidb-lite	37
LotjaGi3g1v0141500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent helicase hrq1; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|G7IJ55\|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500	Domains G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 PF00270 PF02889 PS51192 PS51194 PTHR24075 PTHR24075:SF5 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18021 cd18795	28
LotjaGi3g1v0141500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A0L9UIS3\|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 PF00270 PF00271 PF02889 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF12 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 SignalP-noTM cd18019 cd18021 cd18795	35
LotjaGi3g1v0141500.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|G7IJ55\|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500	Domains G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR004179 IPR014756 IPR027417 IPR035892 IPR036390 PF02889 PTHR24075 PTHR24075:SF13 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18795	21
LotjaGi5g1v0347000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A0B2R3L5\|A0A0B2R3L5_GLYSO U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi5g1v0347000_LC	Domains G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 NON_CYTOPLASMIC_DOMAIN PF00270 PF00271 PF02889 PS51192 PS51194 PTHR12131 PTHR12131:SF12 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 SignalP-noTM cd18019 cd18795	35
LotjaGi6g1v0220000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26
LotjaGi6g1v0220000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26
LotjaGi6g1v0220000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26
LotjaGi6g1v0220000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26
LotjaGi6g1v0220000.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chaperone protein dnaJ; TAIR: AT1G79940.1 DnaJ / Sec63 Brl domains-containing protein; Swiss-Prot: sp\|Q0WT48\|DNJ21_ARATH DnaJ protein ERDJ2A; TrEMBL-Plants: tr\|A0A151R9V4\|A0A151R9V4_CAJCA Translocation protein SEC63 isogeny; Found in the gene: LotjaGi6g1v0220000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.150.20 G3DSA:1.10.287.110 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 IPR001623 IPR004179 IPR014756 IPR035892 IPR036869 NON_CYTOPLASMIC_DOMAIN PF00226 PF02889 PR00625 PS50076 PTHR24075 PTHR24075:SF11 SM00271 SM00973 SSF158702 SSF46565 SSF81296 TMhelix TRANSMEMBRANE cd06257 mobidb-lite	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	5.26