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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0222900 |
| Transcript ID | LotjaGi6g1v0222900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase, putative; TAIR: AT3G42880.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9M1L7|PRK3_ARATH Pollen receptor-like kinase 3; TrEMBL-Plants: tr|G7IIP0|G7IIP0_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi6g1v0222900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52761557..52767901) extracted from Lotus japonicus Gifu genome v1.2.
CAAGTCCCTCCTCCCCAACAAGCTCAAGCACAAACCTCAAAGAACATCATGACACACCTCTCTCTGACCACCCAAAACCA ACAACAACAACAACAACATCAACAACCAAACAACCTCAAAAAAAAACACCACCACCTTAACCTCTCCGAGCAGCGGTCCA CCATTCTCACCGGTCGTGCCACCAAGCAATGGCCGCTGTTCGCACCTTCCACCACCACAACAACCACCACACCCACCACC TCCTCCTCTGTCTCTTCCTCTTCCTCTTCATCTCCCTCTCCCTCTCCTCAGCCTCAGAGACTCAATCCCTCCTCAAGCTC AAACAATCCTTCACCAACGCCGACAAGTCCTTAGCCTCATGGATCCCCAACGTGTCCCCATGCTCCGGCACCTGGACCGG CGTAATCTGCTTCAACAACATCGTCACCGGCCTCCACCTCTCCGACCTCAACCTCTCCGGCACAATCGACGTCGAAGCTC TCGCCGAGATTCACGGCCTCCGAACTCTCAGCTTCGTCAACAACTCCTTCTCCGGCACAATCCCAAGCTTCAACAAGCTC GGACCCATCAAATCCCTCCTCCTCACCCAGAACCACTTCTCCGGCCCCATCCCACAAAACTTCTTCTCCACGTTATCCTC CCTCAAGAAACTCTGGCTCTCCGGCAACAAATTCTCCGGCGAAATCCCCGTCTCCTTAACCGAACCCGACCTCCTCAAAG AGCTTCACCTCGAAGGAAACCAGTTCACCGGCCGACTCCCTAACCTGAAACAAGACTTCCGATCATTCGACGTGTCGCAC AACCAGCTCGAAGGTCCCATCCCGGAAAGCTTGTCGAAATACGGCGTGGTGTCGTTCTCCGGCAACGAAGGTCTCTGTGG GAAGCCGTTGGATAAGCCATGTTCCGGCGGCGGTGACGATTCGTCTTCTTATTACTCCATTCCGACAGGCTCTGGAGTCG GAGGCGGCGACGGCGGTTACGGGTCAAGCTGGGCGGCGAAGGTGATTGTGATCCTCCTTCTGGCGGTTATCGCGGCGGTG ATATTCCTGTTCGTGAAGTCCAGACGGCGGCACGATGATGATTTCAGCGTGGTGAGCAGGAACAGTAGTAGCAGCATGGA CGAGCTGGTGCAAGTGCATGTACCCAGCTTCAAGAGCAGTAGCAGCTTCAGGGGCGGTAGCAGCAGCGGCGGTGTTGTTA ATAGAAGCTTATCCGCCTCTCGGTCCATGTCGTCGACGTCGGGGCCGGCGGGGAGGAAGGAGTCGTCATCTTCTTCGCAT GGTAAGAAGGGAGGAGGAGGGACGAAAGGGGGAGCTGTGGGGGATCTTGTGATGGTGAATGAGGGACAAGGGGTGGCGTT TGGAATGCAGGATTTGATGAAGGCGGCGGCGGAGGTTCTGGGGAACGGTGGTTTGGGGTCGGCGTATAAGGCCGCCATGG CGAATGGGTTGAGTGTGGTGGTGAAGAGGATGAGGGACATGAATAAGATTGGTAGAGATGTGTTTGATGCTGAGATGAGA CAGTTTGGGAGGATCAAACATCCTAACATCTTGACTCCATTGGCTTACCATTATAGGAAAGAGGAGAAGCTCTTTGTCAC TGAGTACATGCCCAAAGGAAGCTTGTTATATGTCTTGCATGGTAACAGATTCTTATCAACTTTGCTTAAACTCAAACCTG GTTTCATATGATAAAAGGTTGCATACCGGTTAGAAACTATGAAAACAAGAAAATAATACGTAGATAGTTTTTGTTAACAA CTTGTTACTTCAATGTAAAATGTAAAGTGCATCAGAATATGCTATTTTTCAGTTTTTCATACTTTTTAACGGTTATTTTA ATGGACTCTAAATCTGTGTTTAAATAAATTTGAAGAAGGATTGATTTGATTGTCTTCACATAAAACTATTATTTCATGAT ATAGTTATTTTGCAATGCAAGTTTAATCTCAAACTAGGTTTCATAACAACAAAATGTGTTTGGATGCCACTTAGCTTTTT ATGTTTGAAGGAGAAGTGATTTTGGATGCTTTTATCTAACGGTTTAAGCTTTTGGAATAGTTAGTTTATGATATATAATA TGTTTGGATTGACTTATCTTTCTTTATAATCAATTCTAAAACACAAAAGTTGTTCACAAAAGTTTCTTCTCATAATTGAT TTTGATTTTTGAATGAAAAATTTCCAAACATTGACATATAATCGGTGCCTCTACGCTTGAGCTTGATCCTCGTTCAATAA TTGGTTCATGACACATCTTTCCATTTCCATTGGAGTGTGTCAAGAACCAATTATATAAACACCTTTAGCAGTTCTGGAAT CATAAAAATCGGCATGAATATAATTCCATTTTGGTCCCTTTCAGATTCTTCCTCCCTTTGTTATTATTGTTTTCTTGTAA TGCAATGCAATATATGTGCAATGTGTGTTGAGAATGAATGTGTGATTATTTTTTGTCAGGTGATAGAGGAATAATCCATG CTGGTCTGAATTGGCCTACCCGTTTGAAGATTGTTAAGGGGATAGCAAGGGGATTGGGCTTCCTTTACACTGAGTATTCT ACCTACGACCTTCCCCATGGGAACCTTAAATCTAACAATGTTCTGCTAACTGATGATTACGAGCCTCTCTTGAGTGACTA TGCTTTTCAACCACTAATCAACCCCAACATTGCAGTGCAGTCAATGTTTGCCTACAAGACCCCAGATTACGTGCACGGCC AGAAAGTTTCACAGAAGACTGATGTTTACTGCTTCGGAATCATCATTCTTGAAGTCGTTACCGGAAAATTCCCTTGTCAA TATCACAGCAATGGCATGGGTGGGACTGATGTTGTGCAGTGGGTTTTCACTGCGATCTCTGAGAGAAGAGAAGGAGAATT GATTGATCCTGAGCTACAAAGTGAAACAAAATCGCTCAACCAGATGCTGCAGCTTCTCCAAATTGGGGCTGCTTGCACGG AAGGCAACCCTGACCGAAGACTGCACATGAAGGAAGCTATTAGAAGGATAGAGGAGGTACAGGTTTGAAGGTTATGTCAA TAGCTTAGTTAAAAGTTTCTTCAGTAGGTGAGAATTGCAGGCCTTGGAAATATTACAAAGTGCCAATTTCATGAATGATT AAGCAGTGATTTGTACAAGAGTAACACACAGGGATGAAATGAATGTAGGAAGGGGGGGAAAGATGGATAGGAAGAAAGAT TGGATAGCTTCACAAAGCAATTCAGTTTATAAGAAAGGTGATAATAAACCTGATGAAACAATGGCTTGGAAGGACCACAG GTGAAGTGTTGACATATCTTTATCTCAGCCCTAAAATTATTAAACTCAAACCATGTTTACTTTCAAGAGGTCTGAAGCTT GGAACGTTTCTCATGTTTGTCCTATTGAAAGATAGCATAATATCAAAGTGCAAGCTAAGTCTCAACATATTGACACTAGG AAAGTATCTGCAATTCTCATAAATATAACATTTTTGGACAGCATCCCTTAAATTTGTAAAGACTTTTTATTTTATTTTTT AGTTTTCCTCTTTGTATATCAAAATAGGATAATGCTTCTGTTTCTACTCACTATCCATTCATATGTTCTTATGTAAACTT ATTATATTAGGCAATACAAGTTTGATTTATGAAATACTAAAATTTAAGGTTCTTTTAATATAATTTGTTTTGGCATTAAA TAGCCACTCAATCTAGTGAATGCAAGCTCTAGATTTCCAGGATCAAGCGCTTGTGTATGAAAAATTATACAAGTATTATG ATAGATAAACCCTGCATACAAGTAAAAGCCAATGATCATGGCAGAAAGCACAAACTAAAACCAAAAACAATATTCTGAAA AAGCCATTGAAAATGAGCACAAACATCGAAATCATCTTCACTACATCTGGTTTTCAAAAACCAAACTATAATTTAAGAGC TGAATAACCTGCCCCAAATGCATCAGCACAAAATCCACATGAAGCAAATGGGGCAGGATAACAGCTGTTGCTTGCTCTCT AGAATACAGAAGCCAAAAAAAGCCAAATTCATTTTTGACCTCTGCTACAAAAAGATATGAGCTTTCAAGTAATCTGTTTC ATATCTAGCTAGTTTCCACAGAAGGCATCTACAATACTATTCTTCCATCCACTATCCAACTCGAATCACAGCTGCATTAA AATTTGCAGATGGGACCAACTTGATTATTAAGATGGTGGGAGGTTTTAATCAAAATCAAGGAACTCCATCCTTTTCCTCA TGGTGCCCTTTAGATCAGAAGCATCACGTTCTGCTTTTTGAGCCTGAAGAGTGAAGCAAATGAAATAAAATTGATTAGTG AGCAACATAGAACAATCATGAACAAACTTGTCATCATATTATTTGCCAAATAGGAGCACAGGGTCCCTATTTCTTTTGGT TGGGGATTGGTGATGTGACTATATTTTGGGTTGGAGAAGGGGTGGGGCAAGAATTTAAGGCGGATAGTCAATCAAAGAAA AGAGCAAAAATCAGATTCACGTTTCTAGTAAAAACAAATTGTTAGCAGGAATTCTCAATCATGTATAGCAGCTTACATTT CTACCCTATAGGTGATATTGTTAAATAGAACATTAAATAGCTTCCAGGCTTCTCTTGGAAAATAATAGGAAACAGGAGGG AATACTCCTACATCACAGTGCATCTTTAGACATGAAACAGCCTCAAAAAACATGGACAGCAAACCAAAAGAAAGCTAAGG AAACAGGAGGGAATACTCCTACATCACATTGCATCTCTTTTGACCCAAATAATGTTTTATTTGGAAAAAGTTTATCAAAT TAAAATAATAATTTTTGAAACACACTAAAACTGCACCATAGTTAACAGGTTCATAATACTCTCTGGTATGTGCTATGGAG TACAGCGATGTGGTCCATCACTTCATTAAATCAGAAAAACTTTACACAAGCTCCACTCGGGAATTGGTTTTGCAGTTCGT AGGATTGAGCAAACCTGGTAACTAAAGACACTGGCAAGGTTTGTGTTGGGTAAGAGTGGTAGTTGAATACAATGTAAACC GTAAAAGCAAAAATCTTATAGACCTTCCATTTTATAATGATGTTAGGGAGGTCATGTTTACTTGTTTTCCACCTTTCTAT TGTTAGATGGTTTCTAGTATATAATGATAAGAGTATGCATATGTTTTCAAATTGGGAATGGAGGTTGTGGTATATAAAGC TCATTCAGAGCCATTAATGGTTACACAATTAATAAGAGCCATCTTGAGTGAAGATTTTTTGGAAGCAACTAACAGAGAAA GGTCATATGCTCATAGCATAGCTGATGGTCATATTCGGAAATTGTTAGCAGCAAATTTTGCTTTTAAGCCAACGGTAGAT ACTGCTATTTATAATTCTGCTAAGATAAATAAGATTGACAAAGATTTAGCAGATGCATTTAATTTCAATTTTCAAGGGGT GACGTTGATCCTCAACATTTTGAACTTAGAAACTTAATTTCCTACAGAGAATCCTGGGAATACACAGGACTGTAGTTTGA AGAAGGAAAACCAGGTGGCCTCAGCTAATAATGTTTATGGTACTCTTATGACAACTGAGGAACCTGTGAAAGTGCAACTC GTGGATTTGAAAGATGTATTAGATACACTTTACCAAAGACTTAGAAACTAGAAATAAAAGTTGGGGAGAATATCTACCCT GAGCTACCAGCAACTGGCACATAACATAAACAAGTTCACTTGGCAATTTCCCACTGGAAAAAGAAGGTGCCCAGAGTGGC CAATAATCTCCAAGACAAGCCAAAGTGATCATTACTTGGGTCAATTAGCCATGTCCCTCAATGCAAGGAGAGAAAAAAAA AAAGCTTCCAACACATCATCAGCAAGCCATACTATAAGGCATTGGTTAAAAAGCCAGACCAAACCAACCAGATCATCCAA AAACCAATGAACCAATAAGACATCTGGTCTACTCTATTCTACCCAAAAAAACTGGTTGACCATAGAACCCATGGAGAACT GGTCCAGAACCAGCGGTTTTAATTGGTTGTTTCTATTTATATAGCCAAAAATAGGCTCAAAATCAAGCTACTAAGGACCA TAAATGGAATTTTATATTTAGCTTCCCATTATCAATCTTTAATTTGCAAGGCATATATAGTTGTCATTTTATTCTAATTT TAATTTCACCTAACTTTATTTCGTATAATTTTATGCTACTTTATTAGTTAATATTTTATTATATAATATTAAATATATAT TTAATTACCCTTATTTTGACTAGGATCAACCACAGTTGCATGATAGAACCCTGATATTATTCACACAAATCCCTATTTCC CAATTAGGGAATTACATAGAAATAC
CDS sequence (LotjaGi6g1v0222900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCTGTTCGCACCTTCCACCACCACAACAACCACCACACCCACCACCTCCTCCTCTGTCTCTTCCTCTTCCTCTT CATCTCCCTCTCCCTCTCCTCAGCCTCAGAGACTCAATCCCTCCTCAAGCTCAAACAATCCTTCACCAACGCCGACAAGT CCTTAGCCTCATGGATCCCCAACGTGTCCCCATGCTCCGGCACCTGGACCGGCGTAATCTGCTTCAACAACATCGTCACC GGCCTCCACCTCTCCGACCTCAACCTCTCCGGCACAATCGACGTCGAAGCTCTCGCCGAGATTCACGGCCTCCGAACTCT CAGCTTCGTCAACAACTCCTTCTCCGGCACAATCCCAAGCTTCAACAAGCTCGGACCCATCAAATCCCTCCTCCTCACCC AGAACCACTTCTCCGGCCCCATCCCACAAAACTTCTTCTCCACGTTATCCTCCCTCAAGAAACTCTGGCTCTCCGGCAAC AAATTCTCCGGCGAAATCCCCGTCTCCTTAACCGAACCCGACCTCCTCAAAGAGCTTCACCTCGAAGGAAACCAGTTCAC CGGCCGACTCCCTAACCTGAAACAAGACTTCCGATCATTCGACGTGTCGCACAACCAGCTCGAAGGTCCCATCCCGGAAA GCTTGTCGAAATACGGCGTGGTGTCGTTCTCCGGCAACGAAGGTCTCTGTGGGAAGCCGTTGGATAAGCCATGTTCCGGC GGCGGTGACGATTCGTCTTCTTATTACTCCATTCCGACAGGCTCTGGAGTCGGAGGCGGCGACGGCGGTTACGGGTCAAG CTGGGCGGCGAAGGTGATTGTGATCCTCCTTCTGGCGGTTATCGCGGCGGTGATATTCCTGTTCGTGAAGTCCAGACGGC GGCACGATGATGATTTCAGCGTGGTGAGCAGGAACAGTAGTAGCAGCATGGACGAGCTGGTGCAAGTGCATGTACCCAGC TTCAAGAGCAGTAGCAGCTTCAGGGGCGGTAGCAGCAGCGGCGGTGTTGTTAATAGAAGCTTATCCGCCTCTCGGTCCAT GTCGTCGACGTCGGGGCCGGCGGGGAGGAAGGAGTCGTCATCTTCTTCGCATGGTAAGAAGGGAGGAGGAGGGACGAAAG GGGGAGCTGTGGGGGATCTTGTGATGGTGAATGAGGGACAAGGGGTGGCGTTTGGAATGCAGGATTTGATGAAGGCGGCG GCGGAGGTTCTGGGGAACGGTGGTTTGGGGTCGGCGTATAAGGCCGCCATGGCGAATGGGTTGAGTGTGGTGGTGAAGAG GATGAGGGACATGAATAAGATTGGTAGAGATGTGTTTGATGCTGAGATGAGACAGTTTGGGAGGATCAAACATCCTAACA TCTTGACTCCATTGGCTTACCATTATAGGAAAGAGGAGAAGCTCTTTGTCACTGAGTACATGCCCAAAGGAAGCTTGTTA TATGTCTTGCATGGTGATAGAGGAATAATCCATGCTGGTCTGAATTGGCCTACCCGTTTGAAGATTGTTAAGGGGATAGC AAGGGGATTGGGCTTCCTTTACACTGAGTATTCTACCTACGACCTTCCCCATGGGAACCTTAAATCTAACAATGTTCTGC TAACTGATGATTACGAGCCTCTCTTGAGTGACTATGCTTTTCAACCACTAATCAACCCCAACATTGCAGTGCAGTCAATG TTTGCCTACAAGACCCCAGATTACGTGCACGGCCAGAAAGTTTCACAGAAGACTGATGTTTACTGCTTCGGAATCATCAT TCTTGAAGTCGTTACCGGAAAATTCCCTTGTCAATATCACAGCAATGGCATGGGTGGGACTGATGTTGTGCAGTGGGTTT TCACTGCGATCTCTGAGAGAAGAGAAGGAGAATTGATTGATCCTGAGCTACAAAGTGAAACAAAATCGCTCAACCAGATG CTGCAGCTTCTCCAAATTGGGGCTGCTTGCACGGAAGGCAACCCTGACCGAAGACTGCACATGAAGGAAGCTATTAGAAG GATAGAGGAGGTACAGGTTTGA
Protein sequence (LotjaGi6g1v0222900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAVRTFHHHNNHHTHHLLLCLFLFLFISLSLSSASETQSLLKLKQSFTNADKSLASWIPNVSPCSGTWTGVICFNNIVT GLHLSDLNLSGTIDVEALAEIHGLRTLSFVNNSFSGTIPSFNKLGPIKSLLLTQNHFSGPIPQNFFSTLSSLKKLWLSGN KFSGEIPVSLTEPDLLKELHLEGNQFTGRLPNLKQDFRSFDVSHNQLEGPIPESLSKYGVVSFSGNEGLCGKPLDKPCSG GGDDSSSYYSIPTGSGVGGGDGGYGSSWAAKVIVILLLAVIAAVIFLFVKSRRRHDDDFSVVSRNSSSSMDELVQVHVPS FKSSSSFRGGSSSGGVVNRSLSASRSMSSTSGPAGRKESSSSSHGKKGGGGTKGGAVGDLVMVNEGQGVAFGMQDLMKAA AEVLGNGGLGSAYKAAMANGLSVVVKRMRDMNKIGRDVFDAEMRQFGRIKHPNILTPLAYHYRKEEKLFVTEYMPKGSLL YVLHGDRGIIHAGLNWPTRLKIVKGIARGLGFLYTEYSTYDLPHGNLKSNNVLLTDDYEPLLSDYAFQPLINPNIAVQSM FAYKTPDYVHGQKVSQKTDVYCFGIIILEVVTGKFPCQYHSNGMGGTDVVQWVFTAISERREGELIDPELQSETKSLNQM LQLLQIGAACTEGNPDRRLHMKEAIRRIEEVQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| SignalP_EUK | 1 | 35 | 35 | - | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 18 | 30 | 13 | - | – | |
| PANTHER | 26 | 672 | 647 | 4.0E-271 | – | |
| PANTHER | 26 | 672 | 647 | 4.0E-271 | – | |
| Gene3D | 30 | 194 | 165 | 5.0E-35 | ||
| Phobius | 31 | 35 | 5 | - | – | |
| Pfam | 35 | 74 | 40 | 1.3E-9 | ||
| SUPERFAMILY | 36 | 224 | 189 | 5.1E-28 | – | |
| Phobius | 36 | 267 | 232 | - | – | |
| Gene3D | 195 | 241 | 47 | 1.4E-7 | ||
| TMHMM | 267 | 289 | 23 | - | – | |
| Phobius | 268 | 289 | 22 | - | – | |
| Phobius | 290 | 673 | 384 | - | – | |
| MobiDBLite | 322 | 367 | 46 | - | – | |
| MobiDBLite | 322 | 376 | 55 | - | – | |
| Gene3D | 379 | 473 | 95 | 1.4E-13 | – | |
| ProSiteProfiles | 398 | 673 | 276 | 24.231 | ||
| Pfam | 402 | 665 | 264 | 6.2E-24 | ||
| SUPERFAMILY | 402 | 668 | 267 | 1.37E-46 | ||
| TMHMM | 403 | 425 | 23 | - | – | |
| Gene3D | 474 | 673 | 200 | 4.9E-35 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0222900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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